Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 4.3e-279 964.1 533 100.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 2.2e-166 589.7 523 67.7
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.0e-155 554.3 467 70.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.2e-150 536.6 471 67.9
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 2.9e-150 536.2 531 63.7
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 4.0e-144 515.8 540 60.7
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 2.9e-142 509.6 478 65.7
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 8.4e-142 508.1 492 64.0
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 5.5e-141 505.4 492 61.8
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 3.0e-139 499.6 470 65.5
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.5e-138 497.3 491 63.5
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 9.6e-138 494.6 466 63.5
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 2.1e-137 493.4 467 66.0
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 4.8e-137 492.3 510 60.2
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.1e-136 491.1 479 62.8
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 9.0e-136 488.0 550 58.4
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 3.4e-135 486.1 562 57.8
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.3e-134 484.2 478 64.2
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 5.0e-134 482.3 526 61.0
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 8.4e-134 481.5 473 58.8
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.2e-133 479.6 472 64.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 9.3e-133 478.0 472 63.8
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.1e-132 476.9 472 61.9
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 3.5e-132 476.1 467 64.7
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 4.6e-132 475.7 462 63.6
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 6.1e-132 475.3 470 61.9
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.3e-131 474.2 465 63.9
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.8e-131 473.8 609 53.7
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 3.0e-131 473.0 466 63.5
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 3.9e-131 472.6 467 63.4
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 8.7e-131 471.5 480 62.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 1.5e-130 470.7 554 52.2
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 1.5e-130 470.7 466 62.9
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.9e-130 470.3 538 58.0
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 4.3e-130 469.2 470 61.1
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 5.7e-130 468.8 468 61.8
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 7.4e-130 468.4 507 59.8
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.3e-129 467.6 501 58.1
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.3e-129 467.6 469 62.9
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.1e-128 464.5 468 63.7
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 1.4e-128 464.2 505 58.8
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 3.1e-128 463.0 475 61.7
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 3.1e-128 463.0 479 59.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 5.3e-128 462.2 467 62.7
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.3e-126 457.6 467 61.5
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.8e-126 456.1 460 62.2
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 5.0e-126 455.7 476 62.0
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 8.5e-126 454.9 467 62.1
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.1e-125 454.5 476 62.4
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.9e-125 453.8 468 61.8
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 9.4e-125 451.4 460 61.5
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.2e-124 451.1 478 61.7
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.4e-123 447.6 470 62.3
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 6.7e-123 445.3 468 60.7
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 8.8e-123 444.9 477 59.7
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.3e-122 442.6 469 61.2
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 9.7e-122 441.4 478 61.1
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.7e-121 440.7 471 59.4
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 6.3e-121 438.7 467 61.9
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.3e-121 438.7 459 60.3
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.4e-120 437.6 562 52.3
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.0e-118 431.4 495 59.8
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.5e-118 428.7 470 58.9
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.9e-117 427.2 540 55.9
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 3.2e-117 426.4 468 60.3
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 4.2e-117 426.0 565 53.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 7.9e-116 421.8 504 54.8
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 3.0e-115 419.9 474 58.0
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 3.3e-114 416.4 469 59.3
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.8e-113 413.3 493 55.8
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.8e-113 413.3 476 57.6
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 1.8e-112 410.6 480 55.8
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 4.1e-112 409.5 497 55.5
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.0e-111 407.1 489 55.2
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 5.0e-110 402.5 476 56.5
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.5e-109 401.0 466 58.2
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.1e-108 397.1 499 54.1
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 1.8e-107 394.0 509 52.7
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.5e-106 391.0 408 60.0
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 2.4e-104 383.6 496 52.8
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 1.6e-103 380.9 496 50.8
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 3.5e-103 379.8 507 55.8
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.1e-101 374.8 441 56.9
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 4.7e-100 369.4 472 53.6
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 8.0e-100 368.6 489 51.3
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 3.0e-99 366.7 489 49.9
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 2.2e-97 360.5 797 40.7
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 7.0e-96 355.5 471 52.4
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 2.2e-94 350.5 501 51.9
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.3e-91 340.5 488 45.3
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 1.5e-90 337.8 470 53.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.5e-90 337.8 563 45.1
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 8.6e-86 322.0 486 51.0
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 9.5e-85 318.5 560 45.4
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 9.5e-85 318.5 560 45.4
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.7e-79 300.4 573 46.1
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 5.4e-64 249.6 245 60.4
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 4.7e-60 236.5 287 52.3
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.4e-56 224.9 257 49.4
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.4e-48 197.6 360 47.8
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 1.2e-47 195.3 232 52.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 6.6e-46 189.5 312 39.4
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 5.6e-45 186.4 123 77.2
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 4.9e-41 173.3 190 53.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.2e-40 170.6 228 48.2
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 4.8e-36 156.8 110 75.5
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.2e-34 152.1 96 79.2
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 2.6e-34 151.0 151 57.6
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 3.2e-32 144.1 82 91.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 4.2e-32 143.7 396 39.1
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 4.0e-27 127.1 157 47.1
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.5e-26 123.6 150 52.7
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 7.6e-26 122.9 150 52.7
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.9e-24 118.2 169 45.6
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 2.1e-23 114.8 123 56.9
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.2e-17 94.7 83 63.9
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 2.9e-17 94.4 209 40.7
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 5.0e-17 93.6 350 37.4
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.5e-16 91.3 164 40.9
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 3.3e-13 80.9 342 33.6
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 4.1e-11 73.9 50 74.0


User provided reference genes

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