Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 1.8e-128 462.6 231 100.0
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 2.5e-90 335.9 237 73.0
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 4.2e-90 335.1 233 73.0
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 4.2e-90 335.1 214 79.4
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 9.4e-90 334.0 237 73.0
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 9.4e-90 334.0 237 73.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 9.4e-90 334.0 235 74.0
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 9.4e-90 334.0 231 74.9
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.2e-89 333.6 241 71.4
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 1.6e-89 333.2 232 73.7
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.8e-88 329.7 206 80.6
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 3.0e-88 328.9 220 76.8
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 3.0e-88 328.9 228 74.1
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 6.8e-88 327.8 220 75.9
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 6.8e-88 327.8 239 72.4
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 8.8e-88 327.4 229 73.4
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.2e-87 327.0 240 70.4
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.2e-87 327.0 230 75.2
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.2e-87 327.0 211 77.7
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.2e-87 327.0 224 76.8
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.2e-87 327.0 224 76.8
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 2.0e-87 326.2 206 78.6
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 3.4e-87 325.5 232 72.0
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 4.4e-87 325.1 190 83.7
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 4.4e-87 325.1 237 70.5
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 4.4e-87 325.1 229 72.9
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 5.7e-87 324.7 238 71.0
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 7.5e-87 324.3 220 74.1
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 7.5e-87 324.3 238 71.0
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 1.3e-86 323.6 229 72.5
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.7e-86 323.2 237 69.6
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 2.2e-86 322.8 192 81.2
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 2.8e-86 322.4 232 71.6
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 3.7e-86 322.0 231 70.1
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 4.8e-86 321.6 223 73.5
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.8e-86 321.6 240 69.2
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 6.3e-86 321.2 213 76.1
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 6.3e-86 321.2 186 82.8
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 6.3e-86 321.2 190 81.1
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 8.3e-86 320.9 228 74.1
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 8.3e-86 320.9 186 82.8
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.1e-85 320.5 196 80.1
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.1e-85 320.5 196 80.1
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 1.4e-85 320.1 231 71.0
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 1.4e-85 320.1 238 71.8
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 1.8e-85 319.7 231 73.2
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 2.4e-85 319.3 190 81.1
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 4.1e-85 318.5 196 80.1
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 4.1e-85 318.5 196 78.6
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 5.4e-85 318.2 190 82.1
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 5.4e-85 318.2 199 79.4
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 5.4e-85 318.2 194 80.9
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 7.0e-85 317.8 226 71.2
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 9.1e-85 317.4 188 81.4
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 9.1e-85 317.4 230 70.9
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.6e-84 316.6 187 81.8
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 3.5e-84 315.5 241 71.0
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 4.5e-84 315.1 220 72.7
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 4.5e-84 315.1 220 72.7
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 4.5e-84 315.1 220 72.7
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 4.5e-84 315.1 227 70.9
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 5.9e-84 314.7 250 66.8
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 1.3e-83 313.5 226 68.6
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 1.7e-83 313.2 189 80.4
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.3e-83 312.8 192 79.7
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 2.9e-83 312.4 223 71.3
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 2.9e-83 312.4 192 81.2
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 3.8e-83 312.0 223 72.2
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 8.6e-83 310.8 233 69.1
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.1e-82 310.5 199 77.9
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.5e-82 309.3 220 72.3
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 3.3e-82 308.9 226 69.9
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 3.3e-82 308.9 211 74.9
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 4.2e-82 308.5 289 60.6
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 5.5e-82 308.1 231 70.1
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 7.2e-82 307.8 232 68.5
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 7.2e-82 307.8 191 78.5
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 7.2e-82 307.8 187 79.7
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 9.5e-82 307.4 188 77.7
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 9.5e-82 307.4 235 67.7
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.6e-81 306.6 188 80.9
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 3.6e-81 305.4 229 70.7
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 4.7e-81 305.1 256 64.8
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 6.1e-81 304.7 179 83.8
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 3.0e-80 302.4 224 68.3
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.2e-79 300.4 173 83.8
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 2.0e-79 299.7 199 74.9
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 2.6e-79 299.3 196 75.5
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 5.7e-79 298.1 173 84.4
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.1e-77 293.9 189 77.2
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 1.1e-77 293.9 205 73.2
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 5.4e-77 291.6 218 69.7
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 5.4e-77 291.6 213 71.8
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 5.4e-77 291.6 196 73.5
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 9.2e-77 290.8 182 79.1
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 1.6e-76 290.0 222 68.5
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 3.5e-76 288.9 250 62.0
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.7e-75 286.6 189 73.0
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 4.0e-72 275.4 208 67.3
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 2.0e-71 273.1 268 57.1
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 5.0e-67 258.5 189 70.4
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.1e-66 257.3 137 89.1
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 5.6e-66 255.0 188 68.6
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.4e-63 245.7 185 67.6
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 3.5e-60 235.7 186 67.7
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 7.8e-60 234.6 122 91.0
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 3.6e-49 199.1 185 56.2
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 6.2e-49 198.4 188 59.0
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 5.2e-48 195.3 198 52.5
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 2.9e-46 189.5 187 54.5
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 4.2e-45 185.7 105 84.8
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 2.4e-37 159.8 123 60.2
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 5.4e-37 158.7 179 48.6
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 8.1e-33 144.8 182 47.8
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.1e-32 142.9 105 69.5
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.3e-30 137.5 103 68.9
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 6.4e-30 135.2 72 84.7
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 1.3e-25 120.9 61 88.5
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.9e-21 107.1 85 68.2
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 2.5e-18 96.7 54 85.2
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 4.8e-17 92.4 104 51.9
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.8e-16 90.5 84 58.3
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 3.1e-16 89.7 78 55.1
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 1.2e-15 87.8 102 48.0
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 2.6e-15 86.7 80 55.0
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.1e-12 77.0 83 51.8
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 3.3e-10 69.7 82 53.7
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 4.3e-10 69.3 60 60.0
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 1.1e-08 64.7 49 65.3
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 5.0e-06 55.8 42 57.1


User provided reference genes

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