Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 2.6e-87 325.5 177 100.0
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 5.2e-80 301.2 176 85.8
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.8e-77 292.7 179 89.9
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 2.4e-77 292.4 177 84.7
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 2.7e-76 288.9 179 87.7
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.9e-76 287.7 177 84.2
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.9e-76 287.7 177 84.2
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.9e-74 282.7 179 87.7
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.9e-74 282.7 179 82.1
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.6e-74 281.2 175 81.1
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.6e-74 281.2 175 81.1
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 2.1e-73 279.3 178 82.0
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 6.1e-73 277.7 179 83.8
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 8.0e-73 277.3 179 81.0
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 2.3e-72 275.8 175 81.1
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 3.1e-72 275.4 176 81.2
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 5.2e-72 274.6 177 80.2
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 1.2e-71 273.5 177 80.8
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.5e-71 273.1 179 84.9
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 2.0e-71 272.7 167 83.2
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 2.6e-71 272.3 179 84.9
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 5.8e-71 271.2 179 78.2
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 3.7e-70 268.5 182 78.6
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 3.7e-70 268.5 164 87.2
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 1.9e-69 266.2 179 77.7
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 3.2e-69 265.4 167 83.8
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 4.1e-69 265.0 178 78.7
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 9.2e-69 263.8 178 77.0
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.6e-68 263.1 178 77.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.0e-68 262.7 176 82.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.0e-67 260.4 176 77.3
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.0e-67 260.4 176 77.3
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.3e-67 260.0 180 73.9
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 6.6e-67 257.7 178 76.4
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 8.6e-67 257.3 177 74.6
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 8.6e-67 257.3 176 76.1
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.1e-66 256.9 176 76.1
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.9e-66 256.1 176 76.1
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.9e-66 256.1 178 75.8
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 7.3e-66 254.2 178 74.7
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 7.3e-66 254.2 179 75.4
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 1.2e-65 253.4 180 76.1
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 8.0e-65 250.8 176 73.9
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 1.1e-64 250.4 178 71.3
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.8e-64 249.6 179 74.9
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 3.1e-64 248.8 178 73.0
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 5.2e-64 248.1 181 77.3
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 8.9e-64 247.3 178 72.5
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 1.5e-63 246.5 179 72.1
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.5e-63 246.5 147 85.0
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.5e-63 246.5 182 74.2
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 2.0e-63 246.1 179 71.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.0e-63 246.1 178 72.5
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 7.5e-63 244.2 176 77.3
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 7.5e-63 244.2 176 77.3
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 9.8e-63 243.8 179 70.9
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 1.3e-62 243.4 173 74.0
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 1.7e-62 243.0 174 73.6
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.9e-62 242.3 169 77.5
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 2.9e-62 242.3 178 70.2
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 6.4e-62 241.1 165 76.4
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 2.4e-61 239.2 164 76.8
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-60 236.9 182 76.9
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 1.6e-60 236.5 176 71.6
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 2.1e-60 236.1 152 78.3
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 3.5e-60 235.3 177 70.1
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 6.0e-60 234.6 181 69.1
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 7.8e-60 234.2 183 71.0
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.3e-59 232.6 167 71.9
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 3.0e-59 232.3 176 69.9
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 3.9e-59 231.9 236 61.9
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 3.9e-59 231.9 135 88.1
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 5.1e-59 231.5 160 71.2
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.1e-58 230.3 177 71.2
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 1.9e-58 229.6 180 67.8
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.3e-58 228.8 177 68.4
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 4.3e-58 228.4 208 63.5
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 5.6e-58 228.0 176 68.8
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 2.1e-57 226.1 179 69.8
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 2.1e-57 226.1 137 83.2
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 2.1e-57 226.1 176 67.0
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 6.2e-57 224.6 137 83.2
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 3.1e-56 222.2 173 64.7
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 4.0e-56 221.9 172 66.9
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 5.2e-56 221.5 181 66.3
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 8.9e-56 220.7 172 66.9
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.2e-55 220.3 174 66.1
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 4.4e-55 218.4 160 71.9
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 2.2e-54 216.1 176 66.5
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 2.2e-54 216.1 133 81.2
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 4.9e-54 214.9 138 79.7
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 6.4e-54 214.5 177 67.8
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.9e-53 213.0 165 68.5
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 9.2e-53 210.7 137 80.3
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 2.1e-52 209.5 177 66.1
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.3e-51 206.8 155 74.8
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.7e-51 206.5 122 86.1
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 5.1e-51 204.9 131 79.4
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 2.8e-49 199.1 174 62.1
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 3.6e-49 198.7 183 62.3
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 8.1e-49 197.6 136 74.3
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 1.1e-48 197.2 134 74.6
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 1.1e-48 197.2 134 74.6
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-48 196.8 135 74.1
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 3.1e-48 195.7 136 71.3
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 6.8e-48 194.5 164 64.6
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 2.6e-47 192.6 107 89.7
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 1.3e-46 190.3 114 81.6
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 7.1e-45 184.5 135 71.1
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.5e-44 182.2 177 60.5
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 9.6e-42 174.1 125 68.0
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.1e-41 172.9 134 65.7
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.1e-40 170.6 143 66.4
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.4e-40 170.2 177 58.2
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 4.0e-40 168.7 147 61.2
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 2.7e-36 156.0 176 51.7
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 5.1e-35 151.8 163 52.8
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 1.5e-31 140.2 135 56.3
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 7.6e-31 137.9 113 62.8
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 8.7e-27 124.4 121 59.5
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 8.7e-27 124.4 99 65.7
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 1.3e-25 120.6 125 52.0
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 3.7e-25 119.0 104 59.6
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 3.7e-25 119.0 117 56.4
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 5.3e-24 115.2 80 72.5
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.5e-23 112.1 72 84.7
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.5e-21 106.3 85 67.1
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 4.3e-18 95.5 137 43.1
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 1.8e-16 90.1 83 60.2
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.7e-12 76.3 54 64.8
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 7.4e-10 68.2 60 61.7
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 8.2e-09 64.7 120 38.3
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-08 63.9 43 81.4
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 6.9e-08 61.6 35 80.0
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 6.5e-06 55.1 121 34.7


User provided reference genes

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