Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023441001 Vitis vinifera HOM05D004899 ORTHO05D006580 1.8e-202 709.1 394 100.0
Dinv06242 Davidia involucrata HOM05D004899 ORTHO05D006580 4.6e-177 624.8 394 88.3
CSS0003371 Camellia sinensis var. sinensis HOM05D004899 ORTHO05D006580 9.8e-172 607.1 394 85.5
Actinidia34758 Actinidia chinensis HOM05D004899 ORTHO05D006580 7.8e-169 597.4 394 84.8
TAR362G0172 Trochodendron aralioides HOM05D004899 ORTHO05D006580 2.3e-168 595.9 394 84.5
Rhsim09G0133700 Rhododendron simsii HOM05D004899 ORTHO05D006580 5.1e-168 594.7 394 84.5
Prupe.6G350900 Prunus persica HOM05D004899 ORTHO05D006580 1.8e-165 586.3 394 84.3
Duzib106G1539 Durio zibethinus HOM05D004899 ORTHO05D006580 3.1e-165 585.5 394 81.5
Manes.08G140200 Manihot esculenta HOM05D004899 ORTHO05D006580 6.8e-165 584.3 394 83.8
Potri.013G047800 Populus trichocarpa HOM05D004899 ORTHO05D006580 6.8e-165 584.3 394 81.0
RcHm_v2.0_Chr3g0449481 Rosa chinensis HOM05D004899 ORTHO05D006580 6.8e-165 584.3 394 82.2
Potri.019G020000 Populus trichocarpa HOM05D004899 ORTHO05D006580 4.4e-164 581.6 394 80.5
CiPaw.08G118600 Carya illinoinensis HOM05D004899 ORTHO05D006580 5.8e-164 581.3 394 83.0
Thecc.05G269900 Theobroma cacao HOM05D004899 ORTHO05D006580 4.9e-163 578.2 394 80.5
PGR142G4366 Punica granatum HOM05D004899 ORTHO05D006580 1.4e-162 576.6 394 81.2
CsaV3_2G009880 Cucumis sativus L. HOM05D004899 ORTHO05D006580 2.4e-162 575.9 394 81.2
MELO3C008694.2 Cucumis melo HOM05D004899 ORTHO05D006580 3.2e-162 575.5 394 81.2
ClCG11G010490 Citrullus lanatus HOM05D004899 ORTHO05D006580 4.1e-162 575.1 394 81.2
FvH4_6g01740 Fragaria vesca HOM05D004899 ORTHO05D006580 5.4e-162 574.7 394 80.7
PGSC0003DMG400023503 Solanum tuberosum HOM05D004899 ORTHO05D006580 7.1e-162 574.3 394 80.5
MSTRG.8229 Avicennia marina HOM05D004899 ORTHO05D006580 9.2e-162 573.9 394 81.2
FAN14G2287 Fragaria x ananassa HOM05D004899 ORTHO05D006580 9.2e-162 573.9 394 80.7
FAN14G4075 Fragaria x ananassa HOM05D004899 ORTHO05D006580 9.2e-162 573.9 394 80.7
Solyc05g054950.2 Solanum lycopersicum HOM05D004899 ORTHO05D006580 1.2e-161 573.5 394 80.5
CAN.G1465.15 Capsicum annuum HOM05D004899 ORTHO05D006580 1.6e-161 573.2 394 80.5
Lj2A44T81 Lonicera japonica HOM05D004899 ORTHO05D006580 1.6e-161 573.2 438 76.0
Gohir.A11G246300 Gossypium hirsutum HOM05D004899 ORTHO05D006580 3.5e-161 572.0 394 79.2
Eucgr.B02154 Eucalyptus grandis HOM05D004899 ORTHO05D006580 7.8e-161 570.9 394 80.5
FAN05G0331 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.0e-160 570.5 394 80.2
FAN05G3121 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.0e-160 570.5 394 80.2
TWI36G0265 Tripterygium wilfordii HOM05D004899 ORTHO05D006580 1.0e-160 570.5 392 79.3
CANSAT54G0581 Cannabis sativa HOM05D004899 ORTHO05D006580 1.3e-160 570.1 394 80.7
Sabra19G0032200 Salix brachista HOM05D004899 ORTHO05D006580 1.3e-160 570.1 394 81.0
Sopen05g033410 Solanum pennellii HOM05D004899 ORTHO05D006580 1.7e-160 569.7 394 80.2
Peaxi162Scf00015g02911 Petunia axillaris HOM05D004899 ORTHO05D006580 3.0e-160 568.9 394 79.4
QL03p029772 Quercus lobata HOM05D004899 ORTHO05D006580 3.0e-160 568.9 410 80.2
MD04G1231200 Malus domestica HOM05D004899 ORTHO05D006580 3.9e-160 568.5 395 81.8
Gohir.D11G256500 Gossypium hirsutum HOM05D004899 ORTHO05D006580 5.1e-160 568.2 394 79.2
FAN09G4068 Fragaria x ananassa HOM05D004899 ORTHO05D006580 8.6e-160 567.4 394 79.9
Gorai.007G274800 Gossypium raimondii HOM05D004899 ORTHO05D006580 8.6e-160 567.4 394 79.2
MBI07_g12932_MAGBIO Magnolia biondii HOM05D004899 ORTHO05D006580 3.3e-159 565.5 395 81.3
Sed0011238 Sechium edule HOM05D004899 ORTHO05D006580 3.3e-159 565.5 397 80.6
Nn1g02931 Nelumbo nucifera HOM05D004899 ORTHO05D006580 4.3e-159 565.1 394 81.0
Sc20g0000690 Simmondsia chinensis HOM05D004899 ORTHO05D006580 2.8e-158 562.4 394 77.7
Aqoxy5G00161 Aquilegia oxysepala HOM05D004899 ORTHO05D006580 3.6e-158 562.0 394 80.5
SalBow6G5574 Salvia bowleyana HOM05D004899 ORTHO05D006580 3.6e-158 562.0 417 77.0
Migut.F01538 Erythranthe guttata HOM05D004899 ORTHO05D006580 6.2e-158 561.2 394 79.7
Hund22166 Selenicereus undatus HOM05D004899 ORTHO05D006580 1.4e-157 560.1 394 75.4
HanXRQChr08g0216941 Helianthus annuus HOM05D004899 ORTHO05D006580 5.2e-157 558.1 394 76.9
Atru.chr2.1001 Acer truncatum HOM05D004899 ORTHO05D006580 3.4e-156 555.4 370 84.9
Cc02_g08720 Coffea canephora HOM05D004899 ORTHO05D006580 5.8e-156 554.7 404 79.2
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 9.9e-156 553.9 394 74.6
EL10Ac4g08990 Beta vulgaris HOM05D004899 ORTHO05D006580 6.0e-153 544.7 394 72.8
Ciclev10024089m.g Citrus clementina HOM05D004899 ORTHO05D006580 1.0e-152 543.9 370 84.1
THA.LOC104820770 Tarenaya hassleriana HOM05D004899 ORTHO05D006580 1.0e-152 543.9 394 71.1
SGA_v2.0_scaffold426G51496 Striga asiatica HOM05D004899 ORTHO05D006580 2.3e-152 542.7 394 77.9
COL.COLO4_15501 Corchorus olitorius HOM05D004899 ORTHO05D006580 3.3e-151 538.9 378 78.3
AL3G14410 Arabidopsis lyrata HOM05D004899 ORTHO05D006580 4.3e-151 538.5 394 70.1
Lsat_1_v5_gn_8_25181 Lactuca sativa HOM05D004899 ORTHO05D006580 9.6e-151 537.3 394 74.9
Carub.0003s0362 Capsella rubella HOM05D004899 ORTHO05D006580 1.3e-150 537.0 394 69.5
PSO674G0057 Papaver somniferum HOM05D004899 ORTHO05D006580 1.3e-150 537.0 394 76.6
Sp3g03310 Schrenkiella parvula HOM05D004899 ORTHO05D006580 1.6e-150 536.6 394 70.1
Aa31LG5G14890 Aethionema arabicum HOM05D004899 ORTHO05D006580 2.8e-150 535.8 394 71.3
AT3G04460 Arabidopsis thaliana HOM05D004899 ORTHO05D006580 2.8e-150 535.8 394 69.8
AUR62040914 Chenopodium quinoa HOM05D004899 ORTHO05D006580 1.1e-149 533.9 394 68.5
arahy.Tifrunner.gnm1.ann1.A8VMLZ Arachis hypogaea HOM05D004899 ORTHO05D006580 6.9e-149 531.2 397 78.1
arahy.Tifrunner.gnm1.ann1.VXFY9N Arachis hypogaea HOM05D004899 ORTHO05D006580 1.2e-148 530.4 397 77.8
Thhalv10020878m.g Eutrema salsugineum HOM05D004899 ORTHO05D006580 1.2e-148 530.4 396 69.9
VMungo0540G0495 Vigna mungo HOM05D004899 ORTHO05D006580 5.8e-148 528.1 396 77.5
A05p43040 Brassica napus HOM05D004899 ORTHO05D006580 1.1e-146 523.9 394 66.5
Os10g0467200 Oryza sativa ssp. japonica HOM05D004899 ORTHO05D006580 1.1e-146 523.9 395 75.2
BolC3t16350H Brassica oleracea HOM05D004899 ORTHO05D006580 3.2e-146 522.3 394 69.0
Ca_11390_v3 Cicer arietinum L. HOM05D004899 ORTHO05D006580 5.4e-146 521.5 394 77.2
Zm00001eb046420 Zea mays HOM05D004899 ORTHO05D006580 5.4e-146 521.5 395 75.2
Glyma.19G247700 Glycine max HOM05D004899 ORTHO05D006580 7.1e-146 521.2 394 77.2
Glyma.03G250100 Glycine max HOM05D004899 ORTHO05D006580 9.3e-146 520.8 396 76.5
A03p33610 Brassica napus HOM05D004899 ORTHO05D006580 1.6e-145 520.0 394 68.3
BcaC01g04376 Brassica carinata HOM05D004899 ORTHO05D006580 6.0e-145 518.1 394 68.3
C03p40810 Brassica napus HOM05D004899 ORTHO05D006580 6.0e-145 518.1 394 68.3
Phvul.006G104800 Phaseolus vulgaris HOM05D004899 ORTHO05D006580 6.0e-145 518.1 396 76.3
BraA03t12536Z Brassica rapa HOM05D004899 ORTHO05D006580 1.8e-144 516.5 399 67.9
DCAR_023087 Daucus carota HOM05D004899 ORTHO05D006580 2.5e-143 512.7 370 78.1
Nitab4.5_0003965g0030 Nicotiana tabacum HOM05D004899 ORTHO05D006580 4.8e-142 508.4 394 74.4
TPR.G10414 Trifolium pratense HOM05D004899 ORTHO05D006580 5.3e-141 505.0 394 74.6
Lj1g0026343 Lotus japonicus HOM05D004899 ORTHO05D006580 1.2e-140 503.8 409 71.9
vmacro10377 Vaccinium macrocarpon HOM05D004899 ORTHO05D006580 3.4e-140 502.3 426 70.2
BcaB04g19333 Brassica carinata HOM05D004899 ORTHO05D006580 2.2e-139 499.6 378 68.0
ATR0736G049 Amborella trichopoda HOM05D004899 ORTHO05D006580 2.1e-137 493.0 395 72.4
Lalb_Chr04g0253351 Lupinus albus HOM05D004899 ORTHO05D006580 2.7e-137 492.7 398 72.9
unitig_899.g15065 Utricularia gibba HOM05D004899 ORTHO05D006580 2.3e-136 489.6 391 73.7
AUR62004828 Chenopodium quinoa HOM05D004899 ORTHO05D006580 1.8e-133 479.9 358 71.2
CDE05G2618 Ceratophyllum demersum HOM05D004899 ORTHO05D006580 1.7e-131 473.4 398 69.1
Nitab4.5_0000914g0090 Nicotiana tabacum HOM05D004899 ORTHO05D006580 3.5e-129 465.7 394 71.1
BcaC05g30197 Brassica carinata HOM05D004899 ORTHO05D006580 1.8e-128 463.4 406 61.6
Medtr1g116380 Medicago truncatula HOM05D004899 ORTHO05D006580 3.1e-125 452.6 372 72.3
BcaC05g29943 Brassica carinata HOM05D004899 ORTHO05D006580 5.9e-124 448.4 394 61.2
Ah.06g191810 Amaranthus hybridus HOM05D004899 ORTHO05D006580 9.7e-119 431.0 394 58.1
Psat0s1997g0040 Pisum sativum HOM05D004899 ORTHO05D006580 8.8e-112 407.9 346 72.0
C05p62800 Brassica napus HOM05D004899 ORTHO05D006580 2.6e-108 396.4 379 59.4
HPP92_008536 Vanilla planifolia HOM05D004899 ORTHO05D006580 8.2e-102 374.8 287 77.0
SMO367G0182 Selaginella moellendorffii HOM05D004899 ORTHO05D006580 1.3e-99 367.5 394 52.3
Cpa.g.sc306.4 Carica papaya HOM05D004899 ORTHO05D006580 6.1e-97 358.6 394 54.6
Pp3c17_6400 Physcomitrium patens HOM05D004899 ORTHO05D006580 9.1e-93 344.7 404 51.5
AagrBONN_evm.TU.Sc2ySwM_228.2413 Anthoceros agrestis HOM05D004899 ORTHO05D006580 1.2e-92 344.4 399 50.1
Haze_04413 Corylus avellana HOM05D004899 ORTHO05D006580 6.5e-91 338.6 328 67.1
CARHR078590 Cardamine hirsuta HOM05D004899 ORTHO05D006580 6.1e-89 332.0 246 67.5
RhsimUnG0045000 Rhododendron simsii HOM05D004899 ORTHO05D006580 5.7e-79 298.9 378 48.9
Mapoly0097s0077 Marchantia polymorpha HOM05D004899 ORTHO05D006580 6.3e-78 295.4 294 54.8
MD12G1249500 Malus domestica HOM05D004899 ORTHO05D006580 1.6e-76 290.8 302 56.0
SHI31416 Sapria himalayana HOM05D004899 ORTHO05D006580 4.9e-70 269.2 389 52.2
CANSAT80G2786 Cannabis sativa HOM05D004899 ORTHO05D006580 2.1e-65 253.8 182 69.2
CANSAT80G2333 Cannabis sativa HOM05D004899 ORTHO05D006580 6.2e-65 252.3 182 68.7
Oeu050631.1 Olea europaea HOM05D004899 ORTHO05D006580 9.2e-61 238.4 292 49.7
Hma1.2p1_1336F.1_g276500 Hydrangea macrophylla HOM05D004899 ORTHO05D006580 2.3e-51 207.2 122 86.1
CBR_g51833 Chara braunii HOM05D004899 ORTHO05D006580 5.1e-51 206.1 540 31.7
CARHR078600 Cardamine hirsuta HOM05D004899 ORTHO05D006580 2.1e-49 200.7 153 72.5
MD00G1148800 Malus domestica HOM05D004899 ORTHO05D006580 1.1e-48 198.4 205 54.6
Cre06.g263602 Chlamydomonas reinhardtii HOM05D004899 ORTHO05D006580 5.8e-47 192.6 420 32.9
TPR.G8890 Trifolium pratense HOM05D001167 ORTHO05D001054 7.6e-47 192.2 165 61.8
BolC5t34933H Brassica oleracea HOM05D004899 ORTHO05D006580 1.5e-42 177.9 125 74.4
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 2.4e-40 170.6 165 52.7
MCO09G554 Micromonas commoda HOM05D004899 ORTHO05D006580 2.4e-40 170.6 411 33.3
PRCOL_00005674 Prasinoderma coloniale HOM05D004899 ORTHO05D006580 1.3e-35 154.8 396 30.8
BraA05t23048Z Brassica rapa HOM05D004899 ORTHO05D006580 3.0e-35 153.7 92 81.5
C01p22380 Brassica napus HOM05D004899 ORTHO05D006580 1.4e-32 144.8 121 61.2
Cc06_g01540 Coffea canephora HOM05D004899 ORTHO05D006580 2.2e-30 137.5 125 65.6
Cc05_g01300 Coffea canephora HOM05D004899 ORTHO05D006580 6.4e-30 136.0 88 79.5
Oeu040904.1 Olea europaea HOM05D004899 ORTHO05D006580 2.7e-28 130.6 71 81.7
BolC6t38557H Brassica oleracea HOM05D004899 ORTHO05D006580 3.9e-27 126.7 130 52.3
BcaC06g35909 Brassica carinata HOM05D004899 ORTHO05D006580 5.1e-27 126.3 151 45.7
MD08G1214200 Malus domestica HOM05D004899 ORTHO05D006580 1.9e-26 124.4 71 87.3
SEGI_05516 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 2.1e-25 120.9 88 68.2
BraA04t16133Z Brassica rapa HOM05D004899 ORTHO05D006580 2.8e-25 120.6 105 60.0
Cc06_g14670 Coffea canephora HOM05D004899 ORTHO05D006580 3.1e-24 117.1 130 66.2
SEGI_08581 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 1.2e-23 115.2 149 45.0
FAN18G0756 Fragaria x ananassa HOM05D004899 ORTHO05D019122 2.1e-17 94.4 80 65.0
Psat3g057720 Pisum sativum HOM05D004899 ORTHO05D006580 1.4e-16 91.7 50 80.0
SEGI_06182 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 7.6e-15 85.9 48 72.9
FvH4_3g30700 Fragaria vesca HOM05D004899 ORTHO05D019122 3.8e-14 83.6 51 80.4
BcaC09g50711 Brassica carinata HOM05D004899 ORTHO05D006580 4.9e-14 83.2 105 45.7
SalBow6G6423 Salvia bowleyana HOM05D031023 ORTHO05D019122 1.1e-13 82.0 46 84.8
FvH4_4g13630 Fragaria vesca HOM05D004899 ORTHO05D019122 3.5e-12 77.0 44 84.1
Psat3g113200 Pisum sativum HOM05D004899 ORTHO05D034818 1.1e-10 72.0 41 78.0
Cc04_g06470 Coffea canephora HOM05D004899 ORTHO05D034818 4.3e-10 70.1 38 89.5
Haze_02280 Corylus avellana HOM05D000013 ORTHO05D000689 7.4e-10 69.3 35 97.1


User provided reference genes

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