Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021891001 Vitis vinifera HOM05D002230 ORTHO05D002441 8.2e-45 183.3 92 100.0
GSVIVG01020936001 Vitis vinifera HOM05D002230 ORTHO05D002441 5.2e-39 164.1 91 87.9
Dinv44229 Davidia involucrata HOM05D002230 ORTHO05D002441 9.1e-36 153.3 91 79.1
Peaxi162Scf00282g00128 Petunia axillaris HOM05D002230 ORTHO05D002441 2.6e-35 151.8 91 79.1
Lj1A1071T61 Lonicera japonica HOM05D002230 ORTHO05D002441 1.0e-34 149.8 91 78.0
Dinv36883 Davidia involucrata HOM05D002230 ORTHO05D002441 2.2e-34 148.7 91 78.0
Eucgr.A00036 Eucalyptus grandis HOM05D002230 ORTHO05D002441 2.2e-34 148.7 91 76.9
TAR627G1002 Trochodendron aralioides HOM05D002230 ORTHO05D002441 2.2e-34 148.7 91 78.0
CAN.G134.124 Capsicum annuum HOM05D002230 ORTHO05D002441 5.0e-34 147.5 91 75.8
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla HOM05D002230 ORTHO05D002441 5.0e-34 147.5 91 78.0
Potri.017G017700 Populus trichocarpa HOM05D002230 ORTHO05D002441 5.0e-34 147.5 91 74.7
CSS0011706 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 6.5e-34 147.1 91 75.8
CSS0042856 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 6.5e-34 147.1 91 75.8
CiPaw.01G173300 Carya illinoinensis HOM05D002230 ORTHO05D002441 6.5e-34 147.1 91 74.7
Actinidia32938 Actinidia chinensis HOM05D002230 ORTHO05D002441 8.5e-34 146.7 91 75.8
TWI38G2091 Tripterygium wilfordii HOM05D002230 ORTHO05D002441 8.5e-34 146.7 91 73.6
Manes.09G003400 Manihot esculenta HOM05D002230 ORTHO05D002441 1.1e-33 146.4 91 74.7
Thecc.10G116300 Theobroma cacao HOM05D002230 ORTHO05D002441 1.9e-33 145.6 91 75.8
Cc03_g10880 Coffea canephora HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 76.9
Duzib114G0665 Durio zibethinus HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 73.6
Solyc01g097640.3 Solanum lycopersicum HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 74.7
Sopen00g003550 Solanum pennellii HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 74.7
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 74.7
PGSC0003DMG403019442 Solanum tuberosum HOM05D002230 ORTHO05D002441 2.5e-33 145.2 91 74.7
Ca_20807_v3 Cicer arietinum L. HOM05D002230 ORTHO05D002441 3.2e-33 144.8 91 72.5
Lj1g0018031 Lotus japonicus HOM05D002230 ORTHO05D002441 3.2e-33 144.8 91 73.6
Nn3g21087 Nelumbo nucifera HOM05D002230 ORTHO05D002441 3.2e-33 144.8 91 76.9
Aqoxy1G01987 Aquilegia oxysepala HOM05D002230 ORTHO05D002441 5.5e-33 144.1 91 72.5
Haze_01398 Corylus avellana HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 74.7
Gohir.A03G041200 Gossypium hirsutum HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 73.6
Gohir.D10G204500 Gossypium hirsutum HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 73.6
Gorai.003G133300 Gossypium raimondii HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 73.6
Gorai.011G229500 Gossypium raimondii HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 73.6
Nitab4.5_0005729g0040 Nicotiana tabacum HOM05D002230 ORTHO05D002441 7.2e-33 143.7 91 74.7
ClCG09G010650 Citrullus lanatus HOM05D002230 ORTHO05D002441 1.2e-32 142.9 90 73.3
Nitab4.5_0009733g0020 Nicotiana tabacum HOM05D002230 ORTHO05D002441 1.6e-32 142.5 91 73.6
QL03p066506 Quercus lobata HOM05D002230 ORTHO05D002441 1.6e-32 142.5 91 73.6
RcHm_v2.0_Chr5g0051051 Rosa chinensis HOM05D002230 ORTHO05D002441 1.6e-32 142.5 91 72.5
DCAR_027245 Daucus carota HOM05D002230 ORTHO05D002441 2.1e-32 142.1 90 73.3
FvH4_4g10660 Fragaria vesca HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 71.4
FAN07G1373 Fragaria x ananassa HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 71.4
FAN12G3082 Fragaria x ananassa HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 71.4
FAN12G3273 Fragaria x ananassa HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 71.4
Lalb_Chr01g0003061 Lupinus albus HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 72.5
Medtr4g068150 Medicago truncatula HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 72.5
Sc13g0000880 Simmondsia chinensis HOM05D002230 ORTHO05D002441 2.1e-32 142.1 91 73.6
Ciclev10018567m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.7e-32 141.7 91 70.3
MD00G1071300 Malus domestica HOM05D002230 ORTHO05D002441 2.7e-32 141.7 91 73.6
RcHm_v2.0_Chr4g0406311 Rosa chinensis HOM05D002230 ORTHO05D002441 2.7e-32 141.7 91 71.4
Sed0001302 Sechium edule HOM05D002230 ORTHO05D002441 2.7e-32 141.7 91 73.6
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea HOM05D002230 ORTHO05D002441 3.6e-32 141.4 91 71.4
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea HOM05D002230 ORTHO05D002441 3.6e-32 141.4 91 71.4
MELO3C013185.2 Cucumis melo HOM05D002230 ORTHO05D002441 3.6e-32 141.4 90 74.4
CsaV3_7G021630 Cucumis sativus L. HOM05D002230 ORTHO05D002441 3.6e-32 141.4 90 74.4
Lalb_Chr19g0138431 Lupinus albus HOM05D002230 ORTHO05D002441 3.6e-32 141.4 91 71.4
Lj3g0013974 Lotus japonicus HOM05D002230 ORTHO05D002441 4.7e-32 141.0 91 72.5
Gohir.A10G197400 Gossypium hirsutum HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 72.5
MD03G1154000 Malus domestica HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 72.5
Prupe.1G548200 Prunus persica HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 72.5
Prupe.8G069100 Prunus persica HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 72.5
vmacro16180 Vaccinium macrocarpon HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 73.6
VMungo1127G0405 Vigna mungo HOM05D002230 ORTHO05D002441 6.1e-32 140.6 91 72.5
Cfa015221 Carpinus fangiana HOM05D002230 ORTHO05D002441 8.0e-32 140.2 91 72.5
FAN17G0610 Fragaria x ananassa HOM05D002230 ORTHO05D002441 8.0e-32 140.2 91 70.3
Sed0010811 Sechium edule HOM05D002230 ORTHO05D002441 8.0e-32 140.2 88 75.0
TPR.G34218 Trifolium pratense HOM05D002230 ORTHO05D002441 1.0e-31 139.8 91 70.3
Glyma.11G125100 Glycine max HOM05D002230 ORTHO05D002441 4.0e-31 137.9 91 70.3
Glyma.12G049700 Glycine max HOM05D002230 ORTHO05D002441 4.0e-31 137.9 91 70.3
Phvul.011G051900 Phaseolus vulgaris HOM05D002230 ORTHO05D002441 5.2e-31 137.5 91 70.3
Hund16448 Selenicereus undatus HOM05D002230 ORTHO05D002441 8.8e-31 136.7 91 72.5
ECA236G3424 Erigeron canadensis HOM05D002230 ORTHO05D002441 1.2e-30 136.3 91 70.3
Atru.chr4.1347 Acer truncatum HOM05D002230 ORTHO05D002441 2.0e-30 135.6 90 67.8
Cpa.g.sc9.331 Carica papaya HOM05D002230 ORTHO05D002441 2.6e-30 135.2 91 71.4
Lsat_1_v5_gn_6_31421 Lactuca sativa HOM05D002230 ORTHO05D002441 2.6e-30 135.2 91 69.2
PSO170G1574 Papaver somniferum HOM05D002230 ORTHO05D002441 2.6e-30 135.2 90 72.2
HanXRQChr14g0454041 Helianthus annuus HOM05D002230 ORTHO05D002441 3.3e-30 134.8 91 69.2
Psat7g208680 Pisum sativum HOM05D002230 ORTHO05D002441 4.4e-30 134.4 91 68.1
MBI04_g09487_MAGBIO Magnolia biondii HOM05D002230 ORTHO05D002441 5.7e-30 134.0 91 67.0
PSO782G1699 Papaver somniferum HOM05D002230 ORTHO05D002441 7.5e-30 133.7 90 71.1
FAN22G2096 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.3e-29 132.9 91 68.1
Migut.A00192 Erythranthe guttata HOM05D002230 ORTHO05D002441 3.7e-29 131.3 91 68.1
SGA_v2.0_scaffold172G39053 Striga asiatica HOM05D002230 ORTHO05D002441 1.1e-28 129.8 91 67.0
Ciclev10027707m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.4e-28 128.6 87 69.0
SalBow4G2246 Salvia bowleyana HOM05D002230 ORTHO05D002441 2.4e-28 128.6 91 67.0
unitig_748.g7990 Utricularia gibba HOM05D002230 ORTHO05D002441 3.1e-28 128.3 90 67.8
CANSAT54G2648 Cannabis sativa HOM05D002230 ORTHO05D002441 4.1e-28 127.9 91 68.1
ECA233G0320 Erigeron canadensis HOM05D002230 ORTHO05D002441 2.0e-27 125.6 91 67.0
Ciclev10027721m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.7e-27 125.2 90 65.6
HPP92_015122 Vanilla planifolia HOM05D002230 ORTHO05D002441 3.5e-27 124.8 90 64.4
Zm00001eb015920 Zea mays HOM05D002230 ORTHO05D002441 4.5e-27 124.4 91 68.1
CDE06G0512 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 5.9e-27 124.0 91 67.0
THA.LOC104815521 Tarenaya hassleriana HOM05D002230 ORTHO05D002441 3.2e-25 118.2 90 64.4
Os03g0333100 Oryza sativa ssp. japonica HOM05D002230 ORTHO05D002441 1.2e-24 116.3 91 61.5
Ah.04g150630 Amaranthus hybridus HOM05D002230 ORTHO05D002441 8.0e-24 113.6 91 61.5
AUR62021045 Chenopodium quinoa HOM05D002230 ORTHO05D002441 8.0e-24 113.6 90 58.9
SHI00660 Sapria himalayana HOM05D002230 ORTHO05D002441 8.0e-24 113.6 91 61.5
EL10Ac3g07289 Beta vulgaris HOM05D002230 ORTHO05D002441 1.4e-23 112.8 91 58.2
BcaC07g42052 Brassica carinata HOM05D002230 ORTHO05D002441 1.4e-23 112.8 91 63.7
Aa31LG1G7760 Aethionema arabicum HOM05D002230 ORTHO05D002441 1.8e-23 112.5 90 62.2
AL1G16730 Arabidopsis lyrata HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
AT1G06720 Arabidopsis thaliana HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
A10p05300 Brassica napus HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
C05p04900 Brassica napus HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
BolC5t29262H Brassica oleracea HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
BraA10t42795Z Brassica rapa HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
Sp1g05450 Schrenkiella parvula HOM05D002230 ORTHO05D002441 2.3e-23 112.1 91 62.6
Thhalv10006612m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 3.0e-23 111.7 91 61.5
C08p51050 Brassica napus HOM05D002230 ORTHO05D002441 4.0e-23 111.3 91 62.6
BolC8t52632H Brassica oleracea HOM05D002230 ORTHO05D002441 4.0e-23 111.3 91 62.6
Oeu023211.3 Olea europaea HOM05D002230 ORTHO05D002441 6.8e-23 110.5 139 44.6
A09p66820 Brassica napus HOM05D002230 ORTHO05D002441 8.8e-23 110.2 91 61.5
Carub.0001s0605 Capsella rubella HOM05D002230 ORTHO05D002441 8.8e-23 110.2 91 60.4
AUR62018398 Chenopodium quinoa HOM05D002230 ORTHO05D002441 1.2e-22 109.8 90 57.8
BraA09t42020Z Brassica rapa HOM05D002230 ORTHO05D002441 1.5e-22 109.4 91 61.5
SHI22050 Sapria himalayana HOM05D002230 ORTHO05D002441 9.8e-22 106.7 91 58.2
BcaC05g24645 Brassica carinata HOM05D002230 ORTHO05D002441 2.2e-21 105.5 98 58.2
Dinv07890 Davidia involucrata HOM05D002230 ORTHO05D002441 4.8e-21 104.4 61 77.0
ATR0317G080 Amborella trichopoda HOM05D002230 ORTHO05D002441 1.4e-20 102.8 90 55.6
Pp3c13_14960 Physcomitrium patens HOM05D002230 ORTHO05D002441 7.0e-20 100.5 89 55.1
Mapoly0040s0120 Marchantia polymorpha HOM05D002230 ORTHO05D002441 2.0e-19 99.0 91 56.0
SEGI_31495 Sequoiadendron giganteum HOM05D002230 ORTHO05D002441 1.0e-18 96.7 89 52.8
SMO358G0014 Selaginella moellendorffii HOM05D002230 ORTHO05D002441 1.7e-18 95.9 89 51.7
Sed0025157 Sechium edule HOM05D002230 ORTHO05D002441 9.5e-17 90.1 88 58.0
FAN12G0585 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.6e-16 89.4 88 53.4
PSO384G3823 Papaver somniferum HOM05D002230 ORTHO05D002441 1.6e-16 89.4 87 52.9
AagrBONN_evm.TU.Sc2ySwM_369.529 Anthoceros agrestis HOM05D002230 ORTHO05D002441 2.1e-16 89.0 90 52.2
CARHR006400 Cardamine hirsuta HOM05D002230 ORTHO05D002441 2.8e-16 88.6 91 46.2
Actinidia14351 Actinidia chinensis HOM05D002230 ORTHO05D002441 7.5e-14 80.5 51 76.5
PSO384G2856 Papaver somniferum HOM05D002230 ORTHO05D002441 9.8e-14 80.1 88 45.5
MCO01G316 Micromonas commoda HOM05D002230 ORTHO05D002441 2.2e-13 79.0 92 45.7
PRCOL_00006812 Prasinoderma coloniale HOM05D002230 ORTHO05D002441 3.7e-13 78.2 85 45.9
Cre10.g445600 Chlamydomonas reinhardtii HOM05D002230 ORTHO05D002441 7.0e-12 73.9 85 42.4
PSO339G1305 Papaver somniferum HOM05D002230 ORTHO05D002441 7.0e-12 73.9 90 44.4
Thhalv10027216m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 1.6e-11 72.8 44 70.5
PSO264G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-11 72.4 90 44.4
PSO673G0034 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-11 72.4 90 44.4
Haze_26692 Corylus avellana HOM05D002230 ORTHO05D002441 3.5e-11 71.6 90 41.1
Sp7g16520 Schrenkiella parvula HOM05D002230 ORTHO05D002441 3.5e-11 71.6 68 52.9
PSO017G1730 Papaver somniferum HOM05D002230 ORTHO05D002441 4.5e-11 71.2 84 44.0
PSO455G0070 Papaver somniferum HOM05D002230 ORTHO05D002441 4.5e-11 71.2 85 42.4
PSO332G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 5.9e-11 70.9 90 44.4
PSO421G0346 Papaver somniferum HOM05D002230 ORTHO05D002441 5.9e-11 70.9 90 44.4
PSO173G0025 Papaver somniferum HOM05D002230 ORTHO05D002441 7.8e-11 70.5 86 40.7
PSO081G0126 Papaver somniferum HOM05D002230 ORTHO05D002441 2.3e-10 68.9 81 43.2
PSO673G0035 Papaver somniferum HOM05D002230 ORTHO05D002441 5.0e-10 67.8 86 39.5
PSO017G6673 Papaver somniferum HOM05D002230 ORTHO05D002441 8.6e-10 67.0 72 47.2
PSO173G0158 Papaver somniferum HOM05D002230 ORTHO05D002441 2.5e-09 65.5 86 39.5
PSO673G0018 Papaver somniferum HOM05D002230 ORTHO05D002441 2.5e-09 65.5 90 41.1
PSO421G0277 Papaver somniferum HOM05D002230 ORTHO05D002441 3.3e-09 65.1 90 41.1
PSO675G3184 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO781G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO781G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO781G0106 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO781G0261 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO781G0262 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-09 64.3 80 42.5
PSO063G2588 Papaver somniferum HOM05D002230 ORTHO05D002441 7.3e-09 63.9 85 40.0
PSO339G3879 Papaver somniferum HOM05D002230 ORTHO05D002441 4.7e-08 61.2 72 45.8
PSO017G0406 Papaver somniferum HOM05D002230 ORTHO05D002441 4.0e-07 58.2 72 43.1
PSO017G5853 Papaver somniferum HOM05D002230 ORTHO05D002441 4.0e-07 58.2 72 43.1
PSO017G6950 Papaver somniferum HOM05D002230 ORTHO05D002441 4.0e-07 58.2 72 43.1
PSO017G7100 Papaver somniferum HOM05D002230 ORTHO05D002441 4.0e-07 58.2 72 43.1
PSO170G2940 Papaver somniferum HOM05D002230 ORTHO05D002441 5.2e-07 57.8 74 40.5
PSO170G5913 Papaver somniferum HOM05D041942 ORTHO05D002441 3.4e-06 55.1 85 35.3
PSO017G1206 Papaver somniferum HOM05D002230 ORTHO05D002441 5.7e-06 54.3 72 41.7


User provided reference genes

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