Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.3e-198 694.9 359 100.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.7e-152 542.3 351 78.9
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.0e-152 541.2 352 78.7
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 2.3e-151 539.3 353 76.8
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.1e-151 538.1 331 81.6
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.3e-150 535.4 348 77.0
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.8e-149 531.6 346 77.5
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.4e-148 530.0 337 80.1
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.8e-148 529.6 353 75.9
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.4e-148 529.3 361 75.3
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.1e-148 528.9 352 76.7
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 6.9e-148 527.7 327 80.4
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 6.9e-148 527.7 348 77.3
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 9.0e-148 527.3 333 80.5
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.2e-147 526.9 347 77.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.7e-147 524.2 348 76.7
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.0e-146 523.9 348 76.7
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.3e-146 523.5 348 76.4
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.2e-146 522.7 357 74.2
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 2.9e-146 522.3 348 76.1
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 3.8e-146 521.9 348 76.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 3.8e-146 521.9 348 76.7
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 3.8e-146 521.9 349 76.2
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 3.8e-146 521.9 353 76.2
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.4e-145 520.0 347 76.4
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 5.5e-145 518.1 353 75.9
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.5e-145 518.1 349 75.4
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.6e-144 516.5 355 73.5
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.1e-144 516.2 346 75.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.1e-144 516.2 335 77.3
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.6e-144 515.0 357 73.4
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 6.1e-144 514.6 353 75.4
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 6.1e-144 514.6 353 73.7
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.4e-143 513.5 354 74.6
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.3e-143 512.7 353 74.2
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.3e-143 512.7 349 74.5
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 3.0e-143 512.3 349 75.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 3.9e-143 511.9 352 75.3
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.1e-142 510.4 363 73.0
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 2.0e-142 509.6 328 77.7
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.0e-142 509.6 374 70.9
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.5e-142 509.2 326 79.8
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 4.3e-142 508.4 348 75.6
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.3e-142 508.4 345 74.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.7e-141 506.5 356 72.5
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.7e-141 505.4 348 74.4
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.8e-140 503.1 342 74.0
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.8e-140 503.1 357 70.9
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 2.4e-140 502.7 336 77.1
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.4e-140 502.7 320 78.1
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 2.4e-140 502.7 344 73.8
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.4e-140 502.7 347 73.5
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 4.1e-140 501.9 327 78.0
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.9e-140 501.1 352 71.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.5e-139 500.0 348 72.7
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.0e-139 499.6 324 77.2
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.6e-139 499.2 328 76.8
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 3.4e-139 498.8 347 72.3
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 4.5e-139 498.4 372 70.4
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 7.7e-139 497.7 353 72.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 2.2e-138 496.1 349 72.5
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.9e-138 495.7 344 73.3
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.9e-138 495.7 368 72.0
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 5.0e-138 495.0 363 70.5
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.9e-137 493.0 349 71.6
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 3.2e-137 492.3 301 82.1
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.2e-137 492.3 342 72.8
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 5.5e-137 491.5 332 73.2
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 7.2e-137 491.1 356 70.8
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 9.4e-137 490.7 326 75.5
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 9.4e-137 490.7 376 68.6
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.7e-136 489.2 349 71.1
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 3.6e-136 488.8 328 77.1
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.9e-136 487.6 353 71.1
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.4e-135 486.9 329 76.0
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.8e-135 486.5 350 71.4
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.3e-135 486.1 331 74.0
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.0e-135 485.7 328 74.4
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 3.0e-135 485.7 349 71.6
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.0e-135 485.7 345 71.0
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.5e-134 483.4 345 71.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 7.4e-134 481.1 349 68.8
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.3e-133 480.3 348 70.7
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 4.8e-133 478.4 333 73.3
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.3e-133 478.0 331 74.6
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.1e-132 477.2 344 70.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.4e-132 476.9 350 68.3
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.4e-132 476.9 350 68.6
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.8e-132 476.5 350 68.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.4e-132 476.1 329 72.9
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 5.3e-132 474.9 321 73.8
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 5.3e-132 474.9 321 73.2
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 7.0e-132 474.6 329 72.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.2e-131 473.8 321 73.2
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 4.5e-131 471.9 321 73.2
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.5e-131 471.9 321 72.9
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 5.9e-131 471.5 327 71.3
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 5.9e-131 471.5 399 63.2
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.3e-130 470.3 321 72.9
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.3e-130 470.3 332 73.8
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-130 469.9 337 71.2
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 5.0e-130 468.4 321 72.6
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 5.0e-130 468.4 355 67.3
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.1e-129 467.2 331 71.9
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.4e-129 466.8 321 71.7
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 9.4e-129 464.2 345 69.6
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 4.7e-128 461.8 306 78.1
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.0e-127 460.7 350 67.4
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.8e-127 459.9 332 72.3
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.3e-127 459.5 327 70.3
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 9.7e-126 454.1 327 69.1
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.2e-125 453.0 326 73.0
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 4.8e-125 451.8 348 67.5
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 6.3e-125 451.4 265 83.0
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 6.3e-125 451.4 358 65.6
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.4e-124 449.5 306 75.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 4.1e-124 448.7 325 69.8
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 3.5e-123 445.7 338 69.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.0e-122 444.1 336 66.7
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.0e-122 444.1 322 70.2
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.9e-121 439.9 307 73.9
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.5e-121 439.5 347 67.7
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 3.2e-121 439.1 354 64.7
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-118 430.3 525 48.8
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 7.5e-118 427.9 353 64.6
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.7e-117 426.8 322 66.1
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 9.1e-116 421.0 265 78.9
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 6.1e-112 408.3 343 62.4
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.4e-108 396.4 275 74.9
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 4.1e-108 395.6 282 73.8
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 3.3e-105 386.0 352 59.7
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.0e-103 380.9 287 70.0
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 9.5e-97 357.8 227 78.4
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-95 353.6 351 57.5
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 5.8e-94 348.6 348 52.6
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 7.0e-92 341.7 351 52.1
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 9.5e-89 331.3 193 86.5
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 8.0e-88 328.2 239 68.6
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.0e-86 323.6 210 78.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 3.4e-86 322.8 290 55.9
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 6.0e-83 312.0 217 73.7
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.3e-82 310.8 226 71.2
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.6e-72 277.3 162 85.2
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.7e-67 260.0 182 70.3
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.5e-67 259.6 170 76.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 2.3e-66 256.9 376 41.0
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.1e-65 254.6 213 63.4
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.5e-62 244.2 161 73.3
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.6e-56 224.2 161 68.9
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.6e-54 216.9 273 50.5
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.1e-52 211.5 162 67.9
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 5.3e-47 192.6 336 39.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.2e-46 191.4 193 54.4
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.1e-43 180.6 144 66.0
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-39 168.3 112 75.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.0e-29 132.9 255 36.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.3e-26 124.0 285 31.9
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.2e-24 117.5 62 88.7
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-23 114.8 112 54.5
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.2e-22 111.7 214 37.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-22 110.9 78 69.2
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 7.7e-22 109.0 339 30.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 7.2e-20 102.4 63 73.0
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.6e-17 94.0 57 77.2
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.7e-17 92.0 56 82.1
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.8e-13 80.1 70 60.0
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 5.9e-06 56.2 35 68.6


User provided reference genes

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