Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.1e-201 704.9 351 100.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.2e-174 615.1 348 87.9
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.6e-173 612.8 348 87.4
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 2.4e-169 599.0 350 84.0
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.4e-169 599.0 348 85.1
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 4.5e-168 594.7 350 84.0
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 4.5e-168 594.7 350 84.0
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.3e-167 593.2 347 84.7
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.2e-167 592.4 353 84.1
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.9e-167 592.0 347 84.4
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 3.8e-167 591.7 347 85.6
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 3.8e-167 591.7 350 83.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 3.8e-167 591.7 350 83.4
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 8.5e-167 590.5 348 83.0
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.1e-166 590.1 349 84.5
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.4e-166 589.7 350 83.1
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.4e-166 589.7 351 84.3
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.9e-166 589.3 347 85.3
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 5.5e-166 587.8 348 84.8
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.5e-166 587.8 351 83.8
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.3e-164 582.4 348 83.9
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.9e-164 581.6 347 85.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.7e-164 580.9 351 82.6
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.1e-163 580.1 347 83.0
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.5e-163 579.7 347 84.7
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.0e-163 579.3 356 82.3
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.0e-163 579.3 349 82.8
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 4.4e-163 578.2 352 82.1
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 3.7e-162 575.1 345 83.5
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 4.1e-161 571.6 351 80.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 7.0e-161 570.9 333 85.3
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.2e-160 570.1 334 84.4
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.6e-160 569.7 363 80.2
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 5.9e-160 567.8 353 81.6
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.9e-159 565.5 346 81.2
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 5.0e-159 564.7 364 78.8
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 8.5e-159 563.9 351 80.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.5e-158 562.4 360 78.1
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.2e-158 561.6 349 79.4
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.7e-157 558.9 350 79.4
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 2.7e-157 558.9 382 74.3
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 4.7e-157 558.1 350 79.1
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.0e-156 557.0 350 78.6
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.3e-156 555.8 352 80.1
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.0e-156 555.1 350 78.6
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.2e-156 554.7 356 78.1
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.7e-156 554.3 356 77.5
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.5e-155 550.8 354 78.0
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.7e-154 549.7 350 77.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.7e-154 549.7 354 76.8
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.2e-154 549.3 350 79.1
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 3.7e-154 548.5 352 77.6
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.7e-154 548.5 329 84.2
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 4.8e-154 548.1 349 78.5
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.4e-153 546.6 348 77.9
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.4e-153 546.6 351 77.2
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.1e-153 545.4 343 78.7
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 3.1e-153 545.4 353 76.8
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 4.1e-153 545.0 351 76.1
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-151 539.7 350 77.4
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 2.2e-151 539.3 356 76.4
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 5.0e-151 538.1 352 75.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.5e-151 537.3 346 77.7
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.1e-150 537.0 351 76.4
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.9e-150 536.2 354 75.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.2e-150 535.0 327 80.4
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 7.2e-150 534.3 328 80.8
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 9.4e-150 533.9 348 77.0
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.2e-149 533.5 330 79.7
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.6e-149 533.1 354 76.0
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.6e-149 533.1 346 76.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.1e-149 532.7 323 80.8
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.8e-148 527.7 381 70.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.5e-147 526.6 307 87.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.6e-147 525.8 405 68.4
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.4e-147 525.0 334 79.0
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 8.3e-146 520.8 350 74.3
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-145 520.4 346 75.7
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 4.5e-144 515.0 350 72.9
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 7.7e-144 514.2 325 77.2
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.7e-143 513.1 325 77.2
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.7e-143 513.1 328 77.1
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.1e-142 510.4 326 78.5
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.9e-142 509.6 336 76.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 7.2e-142 507.7 325 75.4
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 2.8e-141 505.8 360 70.0
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.6e-141 505.4 325 76.3
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 8.0e-141 504.2 329 77.8
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.0e-140 503.8 347 74.6
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.0e-140 503.8 341 75.1
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.8e-139 497.3 327 76.1
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.2e-138 496.1 327 73.1
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.2e-138 496.1 367 70.6
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 3.7e-138 495.4 341 71.6
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.7e-138 495.4 349 73.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.7e-138 495.4 334 74.6
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 6.3e-138 494.6 341 71.3
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 8.3e-138 494.2 344 73.8
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-137 493.8 343 70.6
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 2.4e-137 492.7 323 74.6
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.4e-137 492.7 347 72.3
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 3.2e-137 492.3 322 73.9
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.0e-136 489.6 319 74.9
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.0e-136 489.6 344 70.3
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 2.7e-136 489.2 344 70.3
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.0e-135 487.3 319 74.9
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.3e-135 486.9 322 73.6
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.3e-135 486.9 322 73.9
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.7e-135 486.5 331 72.2
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.3e-135 486.1 323 74.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 5.0e-135 485.0 328 73.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.5e-134 482.6 346 71.7
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 4.3e-134 481.9 325 73.2
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.6e-134 481.5 349 70.5
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 6.1e-133 478.0 306 77.8
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 8.0e-133 477.6 356 69.1
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.0e-132 477.2 267 89.5
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.0e-132 477.2 364 67.0
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.0e-132 475.3 310 76.5
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 2.0e-131 473.0 346 70.8
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.5e-131 471.1 325 69.8
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.2e-130 469.5 327 72.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 3.2e-129 465.7 311 74.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 4.6e-128 461.8 336 68.5
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 6.0e-128 461.5 530 49.8
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 5.0e-127 458.4 327 70.9
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.1e-125 453.0 275 83.6
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.8e-125 452.6 350 68.3
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 5.4e-121 438.3 288 79.2
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.1e-120 436.4 268 81.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 4.7e-109 398.7 325 64.6
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.8e-101 372.9 353 56.4
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 7.6e-99 364.8 335 56.7
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 9.9e-99 364.4 227 78.4
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 2.7e-96 356.3 280 66.4
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 3.5e-96 355.9 243 73.3
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.1e-93 346.7 206 83.5
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.7e-90 337.0 230 73.5
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.2e-88 330.9 290 57.9
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.1e-88 330.1 267 64.8
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 1.5e-86 323.9 202 80.2
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 2.8e-85 319.7 230 71.3
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.4e-83 312.8 188 83.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.7e-74 283.9 163 85.9
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 5.3e-68 262.3 375 42.1
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 2.9e-66 256.5 214 62.6
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 5.0e-66 255.8 186 67.2
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 8.8e-63 245.0 186 68.3
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 7.4e-62 241.9 164 73.2
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 9.7e-62 241.5 161 73.9
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.1e-56 223.8 144 77.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.3e-55 220.3 270 48.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.0e-51 207.2 196 57.7
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 9.4e-49 198.4 329 41.0
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 5.9e-43 179.1 114 78.9
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.6e-32 143.3 154 51.3
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 3.8e-26 123.2 71 87.3
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 5.0e-26 122.9 392 30.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 4.2e-25 119.8 254 36.2
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 1.2e-24 118.2 285 31.9
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.5e-22 111.3 206 36.4
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 3.7e-21 106.7 65 75.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.7e-21 106.7 63 77.8
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.0e-18 98.6 56 85.7
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.3e-18 98.2 57 80.7
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.7e-18 97.8 92 56.5
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.4e-12 77.4 78 51.3
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.6e-11 74.7 49 63.3
VMungo1383G0961 Vigna mungo HOM05D001558 ORTHO05D005808 8.1e-08 62.4 59 55.9
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 2.6e-06 57.4 35 71.4


User provided reference genes

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