Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 7.6e-255 883.2 423 100.0
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 4.0e-195 684.9 423 75.2
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.0e-190 670.2 423 74.2
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.0e-190 670.2 423 74.5
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 6.8e-187 657.5 425 72.0
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.1e-181 640.2 421 71.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.3e-181 638.6 422 70.6
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 3.3e-181 638.6 423 71.4
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 4.3e-181 638.3 426 69.7
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.8e-180 635.6 435 68.0
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.1e-179 632.1 413 71.4
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 1.5e-178 629.8 431 68.0
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.0e-178 629.4 427 69.6
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 5.8e-178 627.9 441 67.8
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 7.6e-178 627.5 481 63.8
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.7e-177 626.3 424 70.3
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 2.2e-177 625.9 441 67.6
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 8.4e-177 624.0 422 69.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 8.4e-177 624.0 489 63.0
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.4e-176 622.5 423 67.8
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 2.1e-175 619.4 452 65.0
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.1e-175 619.4 423 68.3
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 1.0e-174 617.1 428 67.8
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.1e-173 613.6 424 67.0
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.9e-173 612.8 425 68.2
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 7.3e-173 610.9 424 66.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 7.3e-173 610.9 431 67.3
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 2.1e-172 609.4 424 65.6
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 7.6e-170 600.9 441 63.0
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 4.9e-169 598.2 431 64.3
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.1e-168 597.0 423 66.0
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 3.2e-168 595.5 416 66.3
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 5.4e-168 594.7 431 64.5
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 5.4e-168 594.7 435 64.4
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 7.1e-168 594.3 425 65.2
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 2.7e-167 592.4 421 65.8
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 6.0e-167 591.3 429 65.0
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 6.0e-167 591.3 372 74.2
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 7.8e-167 590.9 431 64.5
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 3.0e-166 589.0 426 64.8
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 3.9e-166 588.6 434 63.6
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 8.7e-166 587.4 426 64.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 9.0e-163 577.4 427 63.2
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.2e-162 577.0 453 60.7
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.5e-162 576.6 427 63.0
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.4e-162 575.5 424 63.2
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.4e-162 575.5 424 63.2
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 7.6e-162 574.3 424 63.2
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 9.9e-162 573.9 429 62.2
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.3e-161 573.5 423 63.1
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 2.2e-161 572.8 432 60.9
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.1e-160 570.5 423 62.6
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.1e-160 570.5 414 64.3
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.4e-160 570.1 424 62.7
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.4e-160 570.1 424 62.7
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.6e-159 566.6 423 62.4
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 3.5e-159 565.5 464 58.6
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 4.6e-159 565.1 428 62.4
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.3e-158 563.5 424 62.0
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 5.1e-158 561.6 417 63.1
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 3.3e-157 558.9 426 61.0
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 4.3e-157 558.5 426 62.2
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 5.6e-157 558.1 426 62.2
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 8.1e-156 554.3 424 61.6
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.4e-155 553.5 458 57.9
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.5e-154 550.1 435 60.2
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 1.4e-152 543.5 435 60.0
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.7e-151 539.3 429 60.6
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 4.3e-149 531.9 424 59.4
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 5.3e-147 525.0 347 70.9
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.4e-146 522.3 442 57.0
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.5e-146 521.9 421 57.7
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.4e-145 517.7 421 57.2
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.1e-144 517.3 424 59.4
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 5.5e-144 515.0 421 57.0
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.9e-142 508.8 429 56.4
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 3.8e-137 492.3 344 66.6
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.1e-136 490.7 429 55.0
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 5.1e-134 481.9 424 54.7
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.2e-132 476.5 425 55.8
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.2e-132 476.5 425 55.8
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-131 474.2 465 54.0
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 2.5e-128 463.0 385 57.1
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 8.2e-124 448.0 409 50.6
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-123 447.6 347 61.7
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.8e-121 439.1 335 61.5
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-120 436.8 436 47.9
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.5e-109 400.6 427 44.0
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 3.3e-109 399.4 449 42.8
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 2.9e-105 386.3 490 40.2
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.2e-103 380.9 414 44.7
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 3.5e-90 336.3 249 62.2
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 7.3e-88 328.6 212 71.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.1e-86 323.2 388 42.0
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 4.6e-82 309.3 212 67.0
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 7.5e-77 292.0 180 73.9
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 2.4e-75 287.0 186 71.0
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.5e-64 251.1 186 61.8
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 9.5e-64 248.4 185 63.8
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 9.2e-59 231.9 159 63.5
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 5.6e-48 196.1 156 62.8
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.1e-47 194.1 123 72.4
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 2.1e-47 194.1 156 62.2
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 6.2e-47 192.6 156 61.5
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.4e-46 190.7 147 56.5
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 5.3e-46 189.5 144 65.3
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 5.4e-43 179.5 106 77.4
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 2.7e-42 177.2 152 55.3
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.3e-41 174.1 120 64.2
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 4.3e-40 169.9 126 66.7
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.6e-39 167.9 126 61.1
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.4e-38 164.9 112 67.0
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 5.8e-37 159.5 101 69.3
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 5.3e-30 136.3 88 73.9
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 4.5e-29 133.3 83 68.7
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 7.6e-29 132.5 85 70.6
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 4.9e-28 129.8 75 72.0
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.1e-27 128.6 75 73.3
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.1e-27 125.9 126 49.2
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.8e-23 114.0 80 57.5
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 3.7e-23 113.6 118 51.7
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 3.4e-21 107.1 61 70.5
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 4.5e-21 106.7 59 74.6
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.4e-19 101.7 88 50.0
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.1e-16 92.0 172 32.6
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 2.2e-15 87.8 70 54.3
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 6.3e-15 86.3 53 67.9
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.1e-14 85.5 63 66.7
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 2.6e-13 80.9 52 67.3
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 6.1e-10 69.7 42 73.8
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.8e-09 68.2 37 73.0
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 3.0e-09 67.4 42 71.4
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 4.4e-08 63.5 42 64.3
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 2.8e-07 60.8 101 35.6
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 6.3e-07 59.7 101 35.6
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 1.8e-06 58.2 101 35.6


User provided reference genes

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