Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.1e-110 401.7 193 100.0
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.5e-59 233.4 184 66.8
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.9e-59 233.0 137 81.0
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 7.2e-59 231.1 207 63.8
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.3e-57 226.1 174 70.7
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 3.0e-57 225.7 168 68.5
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 3.0e-57 225.7 168 68.5
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 3.9e-57 225.3 186 64.5
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.9e-57 225.3 174 70.7
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 5.2e-57 224.9 189 66.1
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 6.7e-57 224.6 139 77.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 6.7e-57 224.6 190 64.2
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 8.8e-57 224.2 193 62.7
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.8e-55 219.2 128 78.1
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.7e-55 218.8 172 69.2
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.8e-54 216.5 180 65.0
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.4e-54 216.1 176 64.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 2.4e-54 216.1 196 62.2
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 9.1e-54 214.2 181 62.4
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-53 213.8 143 74.1
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.6e-53 213.4 192 58.9
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.6e-53 212.6 121 81.8
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 4.5e-53 211.8 164 66.5
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 4.5e-53 211.8 185 62.7
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 5.9e-53 211.5 189 60.8
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 5.9e-53 211.5 122 81.1
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.7e-52 209.9 122 79.5
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.2e-52 209.5 156 69.2
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 2.2e-52 209.5 115 84.3
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 3.8e-52 208.8 153 69.9
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 5.0e-52 208.4 175 62.3
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.1e-51 207.2 182 62.1
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.5e-51 206.8 181 60.2
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 1.9e-51 206.5 185 62.7
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 5.5e-51 204.9 184 59.8
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 7.2e-51 204.5 184 59.8
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 9.4e-51 204.1 132 70.5
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.2e-50 203.8 181 59.7
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 1.6e-50 203.4 181 58.6
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 2.1e-50 203.0 174 62.6
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 2.7e-50 202.6 174 60.9
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.7e-50 202.6 181 59.7
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 2.7e-50 202.6 206 55.8
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 3.6e-50 202.2 199 58.8
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 3.6e-50 202.2 121 78.5
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 1.0e-49 200.7 187 61.0
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.4e-49 200.3 185 58.4
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.8e-49 199.9 174 59.2
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.8e-49 199.9 147 66.7
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.8e-49 199.9 135 68.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 2.3e-49 199.5 158 63.9
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.3e-49 199.5 167 59.9
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 4.0e-49 198.7 159 63.5
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 5.2e-49 198.4 130 73.8
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 5.2e-49 198.4 189 57.7
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 6.8e-49 198.0 181 58.0
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 6.8e-49 198.0 182 57.7
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 8.8e-49 197.6 179 62.0
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.2e-48 197.2 175 60.0
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 1.2e-48 197.2 176 59.7
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.2e-48 197.2 111 81.1
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.2e-48 197.2 111 81.1
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.0e-48 196.4 113 80.5
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.6e-48 196.1 139 66.2
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-48 196.1 183 59.0
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 3.4e-48 195.7 183 56.3
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 3.4e-48 195.7 183 56.3
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 4.4e-48 195.3 183 56.3
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 4.4e-48 195.3 185 57.8
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 7.5e-48 194.5 138 67.4
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 9.7e-48 194.1 186 57.5
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.3e-47 193.7 151 67.5
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.3e-47 193.7 182 61.0
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 1.7e-47 193.4 185 55.7
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 1.7e-47 193.4 185 55.7
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 1.7e-47 193.4 193 56.5
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.2e-47 193.0 111 82.9
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.8e-47 191.8 194 54.1
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 1.1e-46 190.7 113 80.5
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.4e-46 190.3 130 70.8
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.8e-46 189.9 170 60.0
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 4.1e-46 188.7 190 56.8
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 7.0e-46 188.0 125 71.2
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 9.1e-46 187.6 112 77.7
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 2.0e-45 186.4 159 61.6
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 1.7e-44 183.3 171 59.6
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 2.9e-44 182.6 160 60.0
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 3.8e-44 182.2 172 59.9
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.0e-44 181.8 140 62.9
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 5.5e-43 178.3 114 74.6
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 5.5e-43 178.3 191 51.8
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.4e-41 173.7 111 74.8
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.8e-41 173.3 200 50.5
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.0e-37 159.8 103 68.9
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.3e-36 156.4 196 49.0
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 1.1e-35 154.1 114 65.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.1e-35 154.1 114 65.8
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 9.5e-35 151.0 93 75.3
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.0e-33 145.6 123 55.3
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 5.2e-33 145.2 120 56.7
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.7e-31 139.0 106 58.5
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.3e-31 138.3 137 50.4
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.4e-30 137.1 133 53.4
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.4e-30 136.3 125 54.4
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 7.0e-30 134.8 159 47.8
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.5e-29 132.5 104 57.7
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.5e-29 132.5 148 48.0
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 7.8e-29 131.3 130 50.8
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-28 131.0 163 46.0
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.3e-28 130.6 144 50.0
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.7e-28 130.2 105 54.3
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 2.3e-28 129.8 106 56.6
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.9e-28 129.4 106 56.6
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 3.9e-28 129.0 147 44.2
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 3.9e-28 129.0 112 55.4
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 3.9e-28 129.0 164 46.3
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.1e-27 127.5 109 54.1
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 1.1e-27 127.5 105 55.2
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.1e-27 127.5 105 56.2
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.1e-27 127.5 102 55.9
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 1.5e-27 127.1 111 52.3
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.9e-27 126.7 105 56.2
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 4.3e-27 125.6 137 48.9
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.3e-27 125.6 141 45.4
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.3e-27 125.6 105 57.1
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 7.3e-27 124.8 184 44.0
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 9.5e-27 124.4 135 48.9
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 9.5e-27 124.4 144 43.1
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.2e-26 124.0 103 54.4
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-26 124.0 62 90.3
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.2e-26 124.0 105 53.3
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-26 123.6 125 48.8
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.1e-26 123.2 105 53.3
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.8e-26 122.9 105 49.5
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 2.8e-26 122.9 104 55.8
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.6e-26 122.5 98 61.2
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 8.0e-26 121.3 105 54.3
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.0e-25 120.9 60 93.3
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 1.4e-25 120.6 105 53.3
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.4e-25 120.6 105 53.3
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.3e-25 119.8 108 50.0
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.8e-25 118.2 105 53.3
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 8.9e-25 117.9 165 40.6
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.0e-24 116.7 173 37.6
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.6e-24 116.3 105 50.5
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.6e-24 116.3 105 52.4
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.4e-24 115.9 176 38.6
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 4.4e-24 115.5 131 46.6
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 7.5e-24 114.8 100 57.0
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.9e-23 112.8 190 38.4
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.7e-23 112.5 134 41.0
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 3.7e-23 112.5 106 49.1
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 4.9e-23 112.1 97 53.6
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 4.9e-23 112.1 121 48.8
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 8.3e-23 111.3 115 48.7
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 1.1e-22 110.9 104 50.0
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.6e-21 107.1 108 52.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 6.6e-20 101.7 113 46.9
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 6.6e-20 101.7 113 46.9
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.9e-19 100.1 58 75.9
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-18 97.4 65 69.2
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.6e-18 95.9 115 50.4
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-17 93.2 223 30.5
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 4.4e-16 89.0 107 42.1
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 5.8e-16 88.6 178 39.9
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 4.9e-15 85.5 91 45.1
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-14 84.3 246 27.6
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 1.4e-14 84.0 59 67.8
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 4.1e-14 82.4 59 62.7
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.1e-09 66.2 78 44.9
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 2.6e-08 63.2 120 30.8
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.7e-07 60.5 71 42.3
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 2.2e-07 60.1 47 55.3
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 5.4e-06 55.5 48 47.9


User provided reference genes

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