Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019275001 Vitis vinifera HOM05D004351 ORTHO05D005196 1.3e-69 266.2 129 100.0
GSVIVG01027881001 Vitis vinifera HOM05D003070 ORTHO05D003567 1.3e-27 126.7 113 63.7
GSVIVG01037327001 Vitis vinifera HOM05D004351 ORTHO05D005196 2.8e-14 82.4 74 56.8
PSO339G1418 Papaver somniferum HOM05D004351 ORTHO05D005196 3.1e-13 79.0 74 55.4
TAR633G2420 Trochodendron aralioides HOM05D004351 ORTHO05D005196 3.1e-13 79.0 74 55.4
Ciclev10014772m.g Citrus clementina HOM05D004351 ORTHO05D005196 4.0e-13 78.6 74 54.1
Gohir.A07G119100 Gossypium hirsutum HOM05D004351 ORTHO05D005196 6.8e-13 77.8 74 54.1
Gohir.D07G123400 Gossypium hirsutum HOM05D004351 ORTHO05D005196 6.8e-13 77.8 74 54.1
Gorai.001G133200 Gossypium raimondii HOM05D004351 ORTHO05D005196 6.8e-13 77.8 74 54.1
Manes.02G136500 Manihot esculenta HOM05D004351 ORTHO05D005196 6.8e-13 77.8 74 54.1
PSO211G0001 Papaver somniferum HOM05D004351 ORTHO05D005196 8.9e-13 77.4 74 54.1
PSO384G0035 Papaver somniferum HOM05D004351 ORTHO05D005196 8.9e-13 77.4 74 54.1
Sabra09G0050700 Salix brachista HOM05D004351 ORTHO05D005196 1.2e-12 77.0 74 52.7
Sed0012563 Sechium edule HOM05D004351 ORTHO05D005196 1.2e-12 77.0 74 54.1
Thecc.09G247500 Theobroma cacao HOM05D004351 ORTHO05D005196 1.2e-12 77.0 74 54.1
Duzib168G2208 Durio zibethinus HOM05D004351 ORTHO05D005196 1.5e-12 76.6 74 54.1
Lalb_Chr17g0347771 Lupinus albus HOM05D004351 ORTHO05D005196 1.5e-12 76.6 74 55.4
Zm00001eb150370 Zea mays HOM05D004351 ORTHO05D005196 1.5e-12 76.6 80 53.8
Dinv15025 Davidia involucrata HOM05D004351 ORTHO05D005196 2.0e-12 76.3 74 54.1
Nn7g36761 Nelumbo nucifera HOM05D004351 ORTHO05D005196 2.0e-12 76.3 74 54.1
HPP92_018205 Vanilla planifolia HOM05D004351 ORTHO05D005196 2.0e-12 76.3 80 48.8
Eucgr.J00682 Eucalyptus grandis HOM05D004351 ORTHO05D005196 2.6e-12 75.9 74 52.7
Medtr5g089280 Medicago truncatula HOM05D004351 ORTHO05D005196 2.6e-12 75.9 74 54.1
Actinidia24469 Actinidia chinensis HOM05D004351 ORTHO05D005196 3.4e-12 75.5 74 54.1
Ca_06202_v3 Cicer arietinum L. HOM05D004351 ORTHO05D005196 3.4e-12 75.5 74 54.1
Hma1.2p1_0460F.1_g157450 Hydrangea macrophylla HOM05D004351 ORTHO05D005196 3.4e-12 75.5 74 52.7
SalBow6G0501 Salvia bowleyana HOM05D004351 ORTHO05D005196 3.4e-12 75.5 77 53.2
Sed0017489 Sechium edule HOM05D004351 ORTHO05D005196 3.4e-12 75.5 74 52.7
LjContig00564g0010016 Lotus japonicus HOM05D004351 ORTHO05D005196 4.4e-12 75.1 53 67.9
TWI31G0625 Tripterygium wilfordii HOM05D004351 ORTHO05D005196 4.4e-12 75.1 74 51.4
CANSAT80G2609 Cannabis sativa HOM05D004351 ORTHO05D005196 5.8e-12 74.7 74 52.7
ClCG02G022760 Citrullus lanatus HOM05D004351 ORTHO05D005196 5.8e-12 74.7 74 52.7
Glyma.15G055500 Glycine max HOM05D004351 ORTHO05D005196 5.8e-12 74.7 74 54.1
VMungo0540G1132 Vigna mungo HOM05D004351 ORTHO05D005196 5.8e-12 74.7 74 54.1
CSS0023003 Camellia sinensis var. sinensis HOM05D004351 ORTHO05D005196 7.5e-12 74.3 74 52.7
EL10Ac4g10103 Beta vulgaris HOM05D004351 ORTHO05D005196 9.8e-12 73.9 74 51.4
CiPaw.14G111600 Carya illinoinensis HOM05D004351 ORTHO05D005196 9.8e-12 73.9 59 61.0
COL.COLO4_24484 Corchorus olitorius HOM05D004351 ORTHO05D005196 9.8e-12 73.9 62 58.1
CsaV3_6G038890 Cucumis sativus L. HOM05D004351 ORTHO05D005196 9.8e-12 73.9 74 51.4
HanXRQChr13g0418801 Helianthus annuus HOM05D004351 ORTHO05D005196 9.8e-12 73.9 74 52.7
PGR119G2369 Punica granatum HOM05D004351 ORTHO05D005196 9.8e-12 73.9 74 51.4
Sp6g31440 Schrenkiella parvula HOM05D004351 ORTHO05D005196 9.8e-12 73.9 69 56.5
CDE09G1005 Ceratophyllum demersum HOM05D004351 ORTHO05D005196 1.3e-11 73.6 74 50.0
Ca_06205_v3 Cicer arietinum L. HOM05D004351 ORTHO05D005196 1.3e-11 73.6 53 66.0
Lj2C622G21 Lonicera japonica HOM05D004351 ORTHO05D005196 1.3e-11 73.6 74 52.7
Phvul.006G204400 Phaseolus vulgaris HOM05D004351 ORTHO05D005196 1.3e-11 73.6 59 61.0
Phvul.008G202200 Phaseolus vulgaris HOM05D004351 ORTHO05D005196 1.3e-11 73.6 59 62.7
RcHm_v2.0_Chr5g0050371 Rosa chinensis HOM05D004351 ORTHO05D005196 1.3e-11 73.6 80 50.0
Atru.chr3.3000 Acer truncatum HOM05D004351 ORTHO05D005196 1.7e-11 73.2 74 50.0
CiPaw.13G149200 Carya illinoinensis HOM05D004351 ORTHO05D005196 1.7e-11 73.2 74 50.0
DCAR_023830 Daucus carota HOM05D004351 ORTHO05D005196 1.7e-11 73.2 74 51.4
Potri.009G067700 Populus trichocarpa HOM05D004351 ORTHO05D005196 1.7e-11 73.2 74 50.0
SEGI_39462 Sequoiadendron giganteum HOM05D004351 ORTHO05D005196 1.7e-11 73.2 74 51.4
MD03G1164800 Malus domestica HOM05D004351 ORTHO05D005196 2.2e-11 72.8 74 51.4
Potri.001G273400 Populus trichocarpa HOM05D004351 ORTHO05D005196 2.2e-11 72.8 74 51.4
Dinv36161 Davidia involucrata HOM05D004351 ORTHO05D005196 2.9e-11 72.4 74 51.4
Rhsim13G0210400 Rhododendron simsii HOM05D004351 ORTHO05D005196 2.9e-11 72.4 53 64.2
THA.LOC104811202 Tarenaya hassleriana HOM05D004351 ORTHO05D005196 2.9e-11 72.4 59 61.0
TWI79G1476 Tripterygium wilfordii HOM05D004351 ORTHO05D005196 2.9e-11 72.4 74 50.0
Aa31LG3G15030 Aethionema arabicum HOM05D004351 ORTHO05D005196 3.7e-11 72.0 69 55.1
Cfa009892 Carpinus fangiana HOM05D004351 ORTHO05D005196 3.7e-11 72.0 53 62.3
FvH4_3g27770 Fragaria vesca HOM05D004351 ORTHO05D005196 3.7e-11 72.0 80 48.8
FAN11G3899 Fragaria x ananassa HOM05D004351 ORTHO05D005196 3.7e-11 72.0 80 48.8
FAN21G2561 Fragaria x ananassa HOM05D004351 ORTHO05D005196 3.7e-11 72.0 80 48.8
QL05p016402 Quercus lobata HOM05D004351 ORTHO05D005196 3.7e-11 72.0 74 50.0
unitig_62.g23874 Utricularia gibba HOM05D004351 ORTHO05D005196 3.7e-11 72.0 74 51.4
AL6G22990 Arabidopsis lyrata HOM05D004351 ORTHO05D005196 4.9e-11 71.6 69 55.1
arahy.Tifrunner.gnm1.ann1.A6ZB5M Arachis hypogaea HOM05D004351 ORTHO05D005196 4.9e-11 71.6 53 64.2
BcaNung06879 Brassica carinata HOM05D004351 ORTHO05D005196 4.9e-11 71.6 69 55.1
C09p64690 Brassica napus HOM05D004351 ORTHO05D005196 4.9e-11 71.6 69 55.1
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 4.9e-11 71.6 69 55.1
Cc00_g05710 Coffea canephora HOM05D004351 ORTHO05D005196 4.9e-11 71.6 53 66.0
TPR.G16412 Trifolium pratense HOM05D004351 ORTHO05D005196 4.9e-11 71.6 74 52.7
TAR636G2603 Trochodendron aralioides HOM05D004351 ORTHO05D005196 4.9e-11 71.6 74 50.0
VMungo0540G1052 Vigna mungo HOM05D004351 ORTHO05D005196 4.9e-11 71.6 111 41.4
Aqoxy2G00403 Aquilegia oxysepala HOM05D004351 ORTHO05D005196 6.4e-11 71.2 74 51.4
MSTRG.18468 Avicennia marina HOM05D004351 ORTHO05D005196 6.4e-11 71.2 80 48.8
A10p25600 Brassica napus HOM05D004351 ORTHO05D005196 6.4e-11 71.2 59 59.3
Thhalv10013212m.g Eutrema salsugineum HOM05D004351 ORTHO05D005196 6.4e-11 71.2 69 55.1
Glyma.02G278600 Glycine max HOM05D004351 ORTHO05D005196 6.4e-11 71.2 59 59.3
Glyma.14G036000 Glycine max HOM05D004351 ORTHO05D005196 6.4e-11 71.2 59 59.3
Lj2A623G23 Lonicera japonica HOM05D004351 ORTHO05D005196 6.4e-11 71.2 74 51.4
Os01g0807900 Oryza sativa ssp. japonica HOM05D004351 ORTHO05D005196 6.4e-11 71.2 65 53.8
Prupe.4G264100 Prunus persica HOM05D004351 ORTHO05D005196 6.4e-11 71.2 74 50.0
TPR.G16403 Trifolium pratense HOM05D004351 ORTHO05D005196 6.4e-11 71.2 74 50.0
CARHR200920 Cardamine hirsuta HOM05D004351 ORTHO05D005196 8.3e-11 70.9 69 55.1
Cfa009891 Carpinus fangiana HOM05D004351 ORTHO05D005196 8.3e-11 70.9 53 62.3
Migut.D00673 Erythranthe guttata HOM05D004351 ORTHO05D005196 8.3e-11 70.9 74 50.0
Oeu013460.1 Olea europaea HOM05D004351 ORTHO05D005196 8.3e-11 70.9 74 52.7
Peaxi162Scf00004g04314 Petunia axillaris HOM05D004351 ORTHO05D005196 8.3e-11 70.9 74 51.4
PGR119G0622 Punica granatum HOM05D004351 ORTHO05D005196 8.3e-11 70.9 59 57.6
AT5G12200 Arabidopsis thaliana HOM05D004351 ORTHO05D005196 1.1e-10 70.5 69 53.6
Gohir.D08G020300 Gossypium hirsutum HOM05D004351 ORTHO05D005196 1.1e-10 70.5 71 50.7
Psat2g020840 Pisum sativum HOM05D004351 ORTHO05D005196 1.1e-10 70.5 74 50.0
vmacro04977 Vaccinium macrocarpon HOM05D004351 ORTHO05D005196 1.1e-10 70.5 59 57.6
VMungo0647G2253 Vigna mungo HOM05D004351 ORTHO05D005196 1.1e-10 70.5 59 57.6
Ah.06g194690 Amaranthus hybridus HOM05D004351 ORTHO05D005196 1.4e-10 70.1 74 50.0
ATR1096G054 Amborella trichopoda HOM05D004351 ORTHO05D005196 1.4e-10 70.1 74 48.6
BraA10t44627Z Brassica rapa HOM05D004351 ORTHO05D005196 1.4e-10 70.1 59 57.6
Prupe.4G264000 Prunus persica HOM05D004351 ORTHO05D005196 1.4e-10 70.1 59 57.6
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 1.4e-10 70.1 53 62.3
TPR.G16392 Trifolium pratense HOM05D004351 ORTHO05D005196 1.4e-10 70.1 74 50.0
arahy.Tifrunner.gnm1.ann1.3AG2SN Arachis hypogaea HOM05D004351 ORTHO05D005196 1.9e-10 69.7 53 62.3
AUR62000207 Chenopodium quinoa HOM05D004351 ORTHO05D005196 1.9e-10 69.7 53 62.3
AUR62006553 Chenopodium quinoa HOM05D004351 ORTHO05D005196 1.9e-10 69.7 53 62.3
Carub.0006s1070 Capsella rubella HOM05D004351 ORTHO05D005196 3.2e-10 68.9 69 53.6
Nitab4.5_0009266g0060 Nicotiana tabacum HOM05D004351 ORTHO05D005196 4.1e-10 68.6 74 48.6
Sc09g0005690 Simmondsia chinensis HOM05D004351 ORTHO05D005196 4.1e-10 68.6 56 58.9
Sopen11g024720 Solanum pennellii HOM05D004351 ORTHO05D005196 4.1e-10 68.6 74 48.6
LjContig00564g0013946 Lotus japonicus HOM05D004351 ORTHO05D005196 5.4e-10 68.2 53 60.4
Nitab4.5_0006764g0060 Nicotiana tabacum HOM05D004351 ORTHO05D005196 5.4e-10 68.2 74 48.6
Solyc11g064920.2 Solanum lycopersicum HOM05D004351 ORTHO05D005196 5.4e-10 68.2 74 48.6
CAN.G468.6 Capsicum annuum HOM05D004351 ORTHO05D005196 7.0e-10 67.8 74 48.6
ECA240G3738 Erigeron canadensis HOM05D004351 ORTHO05D005196 7.0e-10 67.8 74 48.6
QL01p016827 Quercus lobata HOM05D004351 ORTHO05D005196 9.2e-10 67.4 53 60.4
Medtr5g089200 Medicago truncatula HOM05D004351 ORTHO05D005196 1.2e-09 67.0 74 48.6
Hund21970 Selenicereus undatus HOM05D004351 ORTHO05D005196 1.2e-09 67.0 45 68.9
SMO351G0214 Selaginella moellendorffii HOM05D004351 ORTHO05D005196 1.6e-09 66.6 74 48.6
MELO3C014554.2 Cucumis melo HOM05D004351 ORTHO05D005196 2.0e-09 66.2 83 45.8
Mapoly0086s0068 Marchantia polymorpha HOM05D004351 ORTHO05D005196 3.5e-09 65.5 74 48.6
AagrBONN_evm.TU.Sc2ySwM_344.922 Anthoceros agrestis HOM05D004351 ORTHO05D005196 6.0e-09 64.7 74 48.6
Sc09g0001080 Simmondsia chinensis HOM05D004351 ORTHO05D005196 7.8e-09 64.3 71 47.9
Cre02.g097000 Chlamydomonas reinhardtii HOM05D004351 ORTHO05D005196 1.0e-08 63.9 89 38.2
Actinidia06976 Actinidia chinensis HOM05D004351 ORTHO05D005196 3.0e-08 62.4 34 79.4
Pp3c24_19320 Physcomitrium patens HOM05D004351 ORTHO05D005196 5.0e-08 61.6 53 58.5
Eucgr.J00683 Eucalyptus grandis HOM05D004351 ORTHO05D005196 2.5e-07 59.3 39 66.7
Cc00_g05730 Coffea canephora HOM05D004351 ORTHO05D005196 7.3e-07 57.8 32 75.0
Haze_26934 Corylus avellana HOM05D004351 ORTHO05D005196 7.3e-07 57.8 44 54.5
CSS0045717 Camellia sinensis var. sinensis HOM05D004351 ORTHO05D005196 2.1e-06 56.2 42 64.3


User provided reference genes

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