Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019111001 Vitis vinifera HOM05D004859 ORTHO05D005807 7.9e-58 226.9 113 100.0
unitig_749.g13492 Utricularia gibba HOM05D004859 ORTHO05D005807 1.2e-48 196.4 104 89.4
Cpa.g.sc39.7 Carica papaya HOM05D004859 ORTHO05D005807 8.2e-47 190.3 104 86.5
PGR031G2676 Punica granatum HOM05D004859 ORTHO05D005807 1.8e-46 189.1 104 85.6
Sc06g0005050 Simmondsia chinensis HOM05D004859 ORTHO05D005807 4.1e-46 188.0 104 84.6
unitig_26.g9580 Utricularia gibba HOM05D000798 ORTHO05D000659 7.0e-46 187.2 105 86.7
Sc16g0010390 Simmondsia chinensis HOM05D004859 ORTHO05D005807 9.1e-46 186.8 104 85.6
Oeu020252.1 Olea europaea HOM05D004859 ORTHO05D005807 1.6e-45 186.0 104 82.7
CSS0011817 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 2.0e-45 185.7 104 85.6
QL01p048380 Quercus lobata HOM05D004859 ORTHO05D005807 2.0e-45 185.7 104 87.5
MBI18_g38869_MAGBIO Magnolia biondii HOM05D004859 ORTHO05D005807 3.5e-45 184.9 104 84.6
CDE12G0839 Ceratophyllum demersum HOM05D004859 ORTHO05D005807 4.5e-45 184.5 104 83.7
Oeu062049.1 Olea europaea HOM05D004859 ORTHO05D005807 5.9e-45 184.1 104 82.7
Glyma.18G241900 Glycine max HOM05D004859 ORTHO05D005807 1.0e-44 183.3 104 84.6
Manes.12G005900 Manihot esculenta HOM05D004859 ORTHO05D005807 1.0e-44 183.3 104 85.6
HPP92_025926 Vanilla planifolia HOM05D004859 ORTHO05D005807 1.3e-44 183.0 103 86.4
TWI36G0708 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 1.7e-44 182.6 104 82.7
Duzib177G0866 Durio zibethinus HOM05D004859 ORTHO05D005807 2.2e-44 182.2 104 83.7
Cc09_g03620 Coffea canephora HOM05D004859 ORTHO05D005807 2.9e-44 181.8 110 80.9
Duzib128G0817 Durio zibethinus HOM05D004859 ORTHO05D005807 3.8e-44 181.4 104 84.6
Nn7g37400 Nelumbo nucifera HOM05D004859 ORTHO05D005807 3.8e-44 181.4 104 85.6
CSS0045397 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 6.5e-44 180.6 106 82.1
Gohir.D04G025700 Gossypium hirsutum HOM05D004859 ORTHO05D005807 6.5e-44 180.6 104 84.6
Gorai.012G028300 Gossypium raimondii HOM05D004859 ORTHO05D005807 6.5e-44 180.6 104 84.6
Glyma.09G250600 Glycine max HOM05D004859 ORTHO05D005807 8.5e-44 180.3 105 83.8
Gohir.A05G391600 Gossypium hirsutum HOM05D004859 ORTHO05D005807 8.5e-44 180.3 104 84.6
Hma1.2p1_0171F.1_g075510 Hydrangea macrophylla HOM05D004859 ORTHO05D005807 8.5e-44 180.3 104 82.7
Rhsim09G0129900 Rhododendron simsii HOM05D004859 ORTHO05D005807 1.1e-43 179.9 106 80.2
Migut.F02136 Erythranthe guttata HOM05D004859 ORTHO05D005807 1.5e-43 179.5 103 80.6
SalBow6G1022 Salvia bowleyana HOM05D004859 ORTHO05D005807 1.5e-43 179.5 104 83.7
ATR0568G125 Amborella trichopoda HOM05D004859 ORTHO05D005807 2.5e-43 178.7 106 82.1
Potri.019G053500 Populus trichocarpa HOM05D004859 ORTHO05D005807 2.5e-43 178.7 103 84.5
VMungo1383G1359 Vigna mungo HOM05D004859 ORTHO05D005807 2.5e-43 178.7 104 81.7
Ca_07986_v3 Cicer arietinum L. HOM05D004859 ORTHO05D005807 3.2e-43 178.3 104 83.7
Nitab4.5_0000083g0160 Nicotiana tabacum HOM05D004859 ORTHO05D005807 3.2e-43 178.3 106 79.2
PGSC0003DMG400007259 Solanum tuberosum HOM05D004859 ORTHO05D005807 3.2e-43 178.3 105 81.0
TAR629G2726 Trochodendron aralioides HOM05D004859 ORTHO05D005807 3.2e-43 178.3 104 80.8
Solyc04g056350.1 Solanum lycopersicum HOM05D004859 ORTHO05D005807 4.2e-43 177.9 105 81.0
Lalb_Chr01g0020391 Lupinus albus HOM05D004859 ORTHO05D005807 5.5e-43 177.6 105 80.0
Manes.13G005600 Manihot esculenta HOM05D004859 ORTHO05D005807 5.5e-43 177.6 104 82.7
Phvul.008G054200 Phaseolus vulgaris HOM05D004859 ORTHO05D005807 5.5e-43 177.6 108 79.6
Sopen04g025250 Solanum pennellii HOM05D004859 ORTHO05D005807 5.5e-43 177.6 105 81.0
Nitab4.5_0001435g0020 Nicotiana tabacum HOM05D004859 ORTHO05D005807 7.2e-43 177.2 106 78.3
TWI18G1000 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 7.2e-43 177.2 104 79.8
Ah.06g195490 Amaranthus hybridus HOM05D004859 ORTHO05D005807 9.4e-43 176.8 104 78.8
Ciclev10013411m.g Citrus clementina HOM05D004859 ORTHO05D005807 9.4e-43 176.8 105 81.9
TPR.G30708 Trifolium pratense HOM05D004859 ORTHO05D005807 9.4e-43 176.8 104 82.7
CAN.G217.12 Capsicum annuum HOM05D004859 ORTHO05D005807 1.2e-42 176.4 105 80.0
CiPaw.07G080000 Carya illinoinensis HOM05D004859 ORTHO05D005807 1.6e-42 176.0 104 81.7
Haze_04552 Corylus avellana HOM05D004859 ORTHO05D005807 2.7e-42 175.3 104 79.8
Gohir.A13G154200 Gossypium hirsutum HOM05D004859 ORTHO05D005807 3.6e-42 174.9 104 79.8
Gohir.D13G158900 Gossypium hirsutum HOM05D004859 ORTHO05D005807 3.6e-42 174.9 104 79.8
Gorai.013G179600 Gossypium raimondii HOM05D004859 ORTHO05D005807 3.6e-42 174.9 104 79.8
THA.LOC104827174 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 6.1e-42 174.1 104 78.8
CANSAT35G0417 Cannabis sativa HOM05D004859 ORTHO05D005807 8.0e-42 173.7 106 82.1
Lj1g0018632 Lotus japonicus HOM05D004859 ORTHO05D005807 8.0e-42 173.7 105 81.0
THA.LOC104802953 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 8.0e-42 173.7 104 78.8
Thecc.05G199300 Theobroma cacao HOM05D004859 ORTHO05D005807 8.0e-42 173.7 104 80.8
Cfa006265 Carpinus fangiana HOM05D004859 ORTHO05D005807 1.0e-41 173.3 104 79.8
Gorai.004G261900 Gossypium raimondii HOM05D004859 ORTHO05D005807 1.0e-41 173.3 104 79.8
MELO3C010059.2 Cucumis melo HOM05D004859 ORTHO05D005807 1.4e-41 172.9 105 80.0
Gohir.D08G245400 Gossypium hirsutum HOM05D004859 ORTHO05D005807 1.4e-41 172.9 104 79.8
Potri.013G086400 Populus trichocarpa HOM05D004859 ORTHO05D005807 1.8e-41 172.6 104 80.8
Actinidia38902 Actinidia chinensis HOM05D004859 ORTHO05D005807 5.2e-41 171.0 99 82.8
CANSAT54G1839 Cannabis sativa HOM05D004859 ORTHO05D005807 5.2e-41 171.0 104 78.8
Lalb_Chr03g0038491 Lupinus albus HOM05D004859 ORTHO05D005807 5.2e-41 171.0 105 77.1
Sed0011478 Sechium edule HOM05D004859 ORTHO05D005807 6.8e-41 170.6 105 78.1
AUR62000312 Chenopodium quinoa HOM05D004859 ORTHO05D005807 8.8e-41 170.2 104 76.0
COL.COLO4_19821 Corchorus olitorius HOM05D004859 ORTHO05D005807 8.8e-41 170.2 106 79.2
CsaV3_1G044540 Cucumis sativus L. HOM05D004859 ORTHO05D005807 8.8e-41 170.2 105 80.0
ECA238G2179 Erigeron canadensis HOM05D004859 ORTHO05D005807 8.8e-41 170.2 105 78.1
Eucgr.H01388 Eucalyptus grandis HOM05D004859 ORTHO05D005807 8.8e-41 170.2 107 79.4
Peaxi162Scf00344g00092 Petunia axillaris HOM05D004859 ORTHO05D005807 8.8e-41 170.2 106 75.5
SHI13720 Sapria himalayana HOM05D004859 ORTHO05D005807 8.8e-41 170.2 104 77.9
ClCG03G010710 Citrullus lanatus HOM05D004859 ORTHO05D005807 1.2e-40 169.9 105 78.1
Aqoxy7G00303 Aquilegia oxysepala HOM05D004859 ORTHO05D005807 1.5e-40 169.5 112 72.3
EL10Ac4g09966 Beta vulgaris HOM05D004859 ORTHO05D005807 1.5e-40 169.5 100 77.0
DCAR_029983 Daucus carota HOM05D004859 ORTHO05D005807 1.5e-40 169.5 105 78.1
DCAR_024584 Daucus carota HOM05D004859 ORTHO05D005807 2.0e-40 169.1 106 77.4
Gohir.A08G225000 Gossypium hirsutum HOM05D004859 ORTHO05D005807 2.0e-40 169.1 100 81.0
MD04G1244600 Malus domestica HOM05D004859 ORTHO05D005807 2.0e-40 169.1 111 74.8
Lsat_1_v5_gn_2_18260 Lactuca sativa HOM05D004859 ORTHO05D005807 4.4e-40 167.9 106 76.4
Psat3g138280 Pisum sativum HOM05D004859 ORTHO05D005807 4.4e-40 167.9 106 79.2
Aa31LG5G13260 Aethionema arabicum HOM05D004859 ORTHO05D005807 5.7e-40 167.5 106 75.5
MD12G1260500 Malus domestica HOM05D004859 ORTHO05D005807 5.7e-40 167.5 110 74.5
Pp3c26_1250 Physcomitrium patens HOM05D004859 ORTHO05D005807 5.7e-40 167.5 105 78.1
Atru.chr12.1788 Acer truncatum HOM05D004859 ORTHO05D005807 7.5e-40 167.2 106 77.4
Prupe.6G361200 Prunus persica HOM05D004859 ORTHO05D005807 7.5e-40 167.2 115 73.0
AUR62006657 Chenopodium quinoa HOM05D004859 ORTHO05D005807 9.8e-40 166.8 104 76.0
ECA233G5366 Erigeron canadensis HOM05D004859 ORTHO05D005807 9.8e-40 166.8 105 77.1
HanXRQChr11g0333601 Helianthus annuus HOM05D004859 ORTHO05D005807 9.8e-40 166.8 105 78.1
Pp3c9_1130 Physcomitrium patens HOM05D004859 ORTHO05D005807 1.3e-39 166.4 104 76.0
Medtr7g079990 Medicago truncatula HOM05D004859 ORTHO05D005807 1.7e-39 166.0 106 78.3
Mapoly0153s0037 Marchantia polymorpha HOM05D004859 ORTHO05D005807 2.2e-39 165.6 106 76.4
RcHm_v2.0_Chr3g0447891 Rosa chinensis HOM05D004859 ORTHO05D005807 2.2e-39 165.6 105 77.1
SEGI_19955 Sequoiadendron giganteum HOM05D004859 ORTHO05D005807 2.2e-39 165.6 104 74.0
Zm00001eb272650 Zea mays HOM05D004859 ORTHO05D005807 2.8e-39 165.2 108 75.9
PSO675G0300 Papaver somniferum HOM05D004859 ORTHO05D005807 3.7e-39 164.9 106 75.5
PSO675G8596 Papaver somniferum HOM05D004859 ORTHO05D005807 3.7e-39 164.9 106 75.5
Os06g0708600 Oryza sativa ssp. japonica HOM05D004859 ORTHO05D005807 4.8e-39 164.5 114 72.8
Zm00001eb227470 Zea mays HOM05D004859 ORTHO05D005807 1.1e-38 163.3 118 70.3
Lsat_1_v5_gn_8_2360 Lactuca sativa HOM05D004859 ORTHO05D005807 1.8e-38 162.5 101 77.2
FAN05G4796 Fragaria x ananassa HOM05D004859 ORTHO05D005807 2.4e-38 162.2 105 76.2
Pp3c15_1090 Physcomitrium patens HOM05D004859 ORTHO05D005807 2.4e-38 162.2 104 74.0
Sabra13G0077700 Salix brachista HOM05D004859 ORTHO05D005807 2.4e-38 162.2 97 79.4
Carub.0003s0189 Capsella rubella HOM05D004859 ORTHO05D005807 3.1e-38 161.8 105 75.2
FvH4_6g00510 Fragaria vesca HOM05D004859 ORTHO05D005807 4.1e-38 161.4 107 74.8
FAN09G3430 Fragaria x ananassa HOM05D004859 ORTHO05D005807 4.1e-38 161.4 107 74.8
FAN14G1059 Fragaria x ananassa HOM05D004859 ORTHO05D005807 4.1e-38 161.4 107 74.8
BcaC05g30510 Brassica carinata HOM05D004859 ORTHO05D005807 5.4e-38 161.0 105 73.3
C09p75910 Brassica napus HOM05D004859 ORTHO05D005807 5.4e-38 161.0 105 73.3
Sp3g01820 Schrenkiella parvula HOM05D004859 ORTHO05D005807 5.4e-38 161.0 105 74.3
A02p03550 Brassica napus HOM05D004859 ORTHO05D005807 9.1e-38 160.2 105 75.2
BcaC05g30507 Brassica carinata HOM05D004859 ORTHO05D005807 1.2e-37 159.8 105 73.3
BraA02t05326Z Brassica rapa HOM05D004859 ORTHO05D005807 1.2e-37 159.8 105 75.2
CARHR076800 Cardamine hirsuta HOM05D004859 ORTHO05D005807 1.6e-37 159.5 105 73.3
AL3G12200 Arabidopsis lyrata HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 73.3
BcaB08g36850 Brassica carinata HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
BcaC04g18876 Brassica carinata HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
C09p60710 Brassica napus HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
BolC9t58902H Brassica oleracea HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
Thhalv10015095m.g Eutrema salsugineum HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
Sp6g27710 Schrenkiella parvula HOM05D004859 ORTHO05D005807 2.7e-37 158.7 105 74.3
A10p22730 Brassica napus HOM05D004859 ORTHO05D005807 3.5e-37 158.3 105 74.3
BraA10t44336Z Brassica rapa HOM05D004859 ORTHO05D005807 3.5e-37 158.3 105 74.3
BolC5t35066H Brassica oleracea HOM05D004859 ORTHO05D005807 7.7e-37 157.1 105 72.4
AT3G02790 Arabidopsis thaliana HOM05D004859 ORTHO05D005807 2.2e-36 155.6 105 72.4
BolC2t06754H Brassica oleracea HOM05D004859 ORTHO05D005807 2.2e-36 155.6 105 73.3
Aa31LG11G13190 Aethionema arabicum HOM05D004859 ORTHO05D005807 3.8e-36 154.8 104 72.1
BcaB01g04980 Brassica carinata HOM05D004859 ORTHO05D005807 5.0e-36 154.5 107 72.0
BolC3t13398H Brassica oleracea HOM05D004859 ORTHO05D005807 5.0e-36 154.5 107 72.0
BcaC03g18492 Brassica carinata HOM05D004859 ORTHO05D005807 6.5e-36 154.1 106 73.6
A03p07800 Brassica napus HOM05D004859 ORTHO05D005807 6.5e-36 154.1 108 71.3
BraA03t10107Z Brassica rapa HOM05D004859 ORTHO05D005807 6.5e-36 154.1 108 71.3
HanXRQChr09g0244001 Helianthus annuus HOM05D004859 ORTHO05D005807 6.5e-36 154.1 105 72.4
CARHR196760 Cardamine hirsuta HOM05D004859 ORTHO05D005807 8.5e-36 153.7 106 73.6
SMO361G0285 Selaginella moellendorffii HOM05D004859 ORTHO05D005807 1.1e-35 153.3 107 73.8
AL6G27410 Arabidopsis lyrata HOM05D004859 ORTHO05D005807 1.6e-34 149.4 106 71.7
AT5G16470 Arabidopsis thaliana HOM05D004859 ORTHO05D005807 1.6e-34 149.4 106 71.7
Carub.0006s1467 Capsella rubella HOM05D004859 ORTHO05D005807 1.6e-34 149.4 106 71.7
VMungo0464G0653 Vigna mungo HOM05D004859 ORTHO05D005807 6.6e-28 127.5 80 75.0
A05p44330 Brassica napus HOM05D004859 ORTHO05D005807 8.9e-25 117.1 69 82.6
BraA06t23289Z Brassica rapa HOM05D004859 ORTHO05D005807 8.9e-25 117.1 69 82.6
Cre09.g416500 Chlamydomonas reinhardtii HOM05D004859 ORTHO05D005807 5.4e-22 107.8 102 61.8
Nn1g09361 Nelumbo nucifera HOM05D004859 ORTHO05D005807 2.5e-19 99.0 52 94.2
RcHm_v2.0_Chr1g0316641 Rosa chinensis HOM05D004859 ORTHO05D005807 5.6e-19 97.8 72 63.9
PRCOL_00002520 Prasinoderma coloniale HOM05D004859 ORTHO05D005807 8.0e-18 94.0 87 55.2
Nn1g01054 Nelumbo nucifera HOM05D004859 ORTHO05D005807 3.1e-17 92.0 56 80.4
AUR62006656 Chenopodium quinoa HOM05D004859 ORTHO05D005807 3.4e-16 88.6 87 50.6
BcaB08g36851 Brassica carinata HOM05D004859 ORTHO05D005807 1.1e-14 83.6 105 49.5
SHI22764 Sapria himalayana HOM05D004859 ORTHO05D005807 1.6e-10 69.7 81 48.1
Dinv29105 Davidia involucrata HOM05D004859 ORTHO05D005807 3.2e-06 55.5 28 96.4
SHI07073 Sapria himalayana HOM05D004859 ORTHO05D005807 4.1e-06 55.1 77 44.2


User provided reference genes

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