Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018579001 Vitis vinifera HOM05D001068 ORTHO05D020111 1.0e-31 139.4 71 100.0
GSVIVG01018581001 Vitis vinifera HOM05D001068 ORTHO05D020111 1.0e-31 139.4 71 100.0
GSVIVG01016325001 Vitis vinifera HOM05D001068 ORTHO05D020111 1.2e-30 136.0 71 97.2
GSVIVG01020650001 Vitis vinifera HOM05D001068 ORTHO05D002190 1.9e-28 128.6 70 92.9
CSS0000404 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D002190 6.8e-23 110.2 70 77.1
Actinidia10988 Actinidia chinensis HOM05D001068 ORTHO05D002190 1.2e-22 109.4 70 75.7
CSS0049947 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D002190 1.5e-22 109.0 70 75.7
Rhsim06G0135500 Rhododendron simsii HOM05D001068 ORTHO05D002190 4.4e-22 107.5 70 74.3
Dinv02425 Davidia involucrata HOM05D001068 ORTHO05D002190 1.3e-21 105.9 70 74.3
TAR627G0187 Trochodendron aralioides HOM05D001068 ORTHO05D002190 2.9e-21 104.8 70 72.9
CiPaw.03G183200 Carya illinoinensis HOM05D001068 ORTHO05D002190 6.4e-21 103.6 70 71.4
Oeu000574.1 Olea europaea HOM05D001068 ORTHO05D002190 1.1e-20 102.8 70 71.4
SalBow7G1339 Salvia bowleyana HOM05D001068 ORTHO05D002190 1.1e-20 102.8 70 71.4
Cfa014679 Carpinus fangiana HOM05D001068 ORTHO05D002190 1.4e-20 102.4 70 72.9
Haze_13278 Corylus avellana HOM05D001068 ORTHO05D002190 1.4e-20 102.4 70 72.9
Gohir.A03G153650 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.4e-20 101.7 70 72.9
THA.LOC104800850 Tarenaya hassleriana HOM05D001068 ORTHO05D002190 2.4e-20 101.7 70 71.4
Lj8A106G57 Lonicera japonica HOM05D001068 ORTHO05D002190 3.2e-20 101.3 70 70.0
Sopen10g003980 Solanum pennellii HOM05D001068 ORTHO05D002190 3.2e-20 101.3 70 71.4
vmacro12355 Vaccinium macrocarpon HOM05D001068 ORTHO05D002190 3.2e-20 101.3 70 71.4
CANSAT64G0075 Cannabis sativa HOM05D001068 ORTHO05D002190 5.4e-20 100.5 70 70.0
Prupe.3G127000 Prunus persica HOM05D001068 ORTHO05D002190 5.4e-20 100.5 70 68.6
TWI59G1279 Tripterygium wilfordii HOM05D001068 ORTHO05D002190 5.4e-20 100.5 70 68.6
Ciclev10014502m.g Citrus clementina HOM05D001068 ORTHO05D002190 7.0e-20 100.1 70 68.6
Gorai.008G155500 Gossypium raimondii HOM05D001068 ORTHO05D002190 7.0e-20 100.1 70 67.1
MBI07_g06445_MAGBIO Magnolia biondii HOM05D001068 ORTHO05D002190 7.0e-20 100.1 70 70.0
Oeu064840.1 Olea europaea HOM05D001068 ORTHO05D002190 7.0e-20 100.1 70 68.6
PGSC0003DMG400010548 Solanum tuberosum HOM05D001068 ORTHO05D002190 7.0e-20 100.1 70 70.0
CARHR005870 Cardamine hirsuta HOM05D001068 ORTHO05D002190 1.2e-19 99.4 70 68.6
Aa31LG1G7310 Aethionema arabicum HOM05D001068 ORTHO05D002190 1.6e-19 99.0 70 67.1
Migut.M00195 Erythranthe guttata HOM05D001068 ORTHO05D002190 1.6e-19 99.0 70 67.1
Solyc10g008110.4 Solanum lycopersicum HOM05D001068 ORTHO05D002190 1.6e-19 99.0 70 70.0
Ca_18909_v3 Cicer arietinum L. HOM05D001068 ORTHO05D002190 2.1e-19 98.6 70 67.1
Gohir.A12G139700 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.1e-19 98.6 70 67.1
Gohir.D12G144200 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.1e-19 98.6 70 65.7
MD17G1234100 Malus domestica HOM05D001068 ORTHO05D002190 2.1e-19 98.6 70 68.6
ClCG02G010170 Citrullus lanatus HOM05D001068 ORTHO05D002190 2.7e-19 98.2 70 67.1
Gohir.D02G176600 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.7e-19 98.2 70 70.0
Gorai.005G198300 Gossypium raimondii HOM05D001068 ORTHO05D002190 2.7e-19 98.2 70 70.0
Nn1g04278 Nelumbo nucifera HOM05D001068 ORTHO05D002190 2.7e-19 98.2 70 67.1
Duzib052G0179 Durio zibethinus HOM05D001068 ORTHO05D002190 3.5e-19 97.8 70 65.7
RcHm_v2.0_Chr2g0128641 Rosa chinensis HOM05D001068 ORTHO05D002190 3.5e-19 97.8 70 67.1
AT1G06290 Arabidopsis thaliana HOM05D001068 ORTHO05D002190 4.6e-19 97.4 70 67.1
CsaV3_2G034560 Cucumis sativus L. HOM05D001068 ORTHO05D002190 4.6e-19 97.4 70 68.6
Potri.019G092600 Populus trichocarpa HOM05D001068 ORTHO05D002190 7.8e-19 96.7 70 70.0
AL1G16310 Arabidopsis lyrata HOM05D001068 ORTHO05D002190 1.0e-18 96.3 70 65.7
FvH4_6g26900 Fragaria vesca HOM05D001068 ORTHO05D002190 1.0e-18 96.3 70 67.1
FAN05G5054 Fragaria x ananassa HOM05D001068 ORTHO05D002190 1.0e-18 96.3 70 67.1
FAN14G5876 Fragaria x ananassa HOM05D001068 ORTHO05D002190 1.0e-18 96.3 70 67.1
TPR.G34856 Trifolium pratense HOM05D001068 ORTHO05D002190 1.0e-18 96.3 70 67.1
Aqoxy1G02246_Aqoxy1G02247 Aquilegia oxysepala HOM05D001068 ORTHO05D002190 1.3e-18 95.9 70 68.6
Sp1g05100 Schrenkiella parvula HOM05D001068 ORTHO05D002190 1.3e-18 95.9 70 65.7
Carub.0001s0566 Capsella rubella HOM05D001068 ORTHO05D002190 1.7e-18 95.5 70 67.1
Lj3g0009326 Lotus japonicus HOM05D001068 ORTHO05D002190 1.7e-18 95.5 70 67.1
Lj3g0024792 Lotus japonicus HOM05D001068 ORTHO05D002190 1.7e-18 95.5 70 68.6
Medtr4g079290 Medicago truncatula HOM05D001068 ORTHO05D002190 1.7e-18 95.5 70 67.1
AT3G06690 Arabidopsis thaliana HOM05D001068 ORTHO05D013681 2.3e-18 95.1 65 69.2
COL.COLO4_04707 Corchorus olitorius HOM05D001068 ORTHO05D002190 2.3e-18 95.1 70 64.3
Lalb_Chr03g0029731 Lupinus albus HOM05D001068 ORTHO05D002190 2.3e-18 95.1 70 68.6
Manes.12G092800 Manihot esculenta HOM05D001068 ORTHO05D002190 3.0e-18 94.7 70 65.7
Sabra19G0105800 Salix brachista HOM05D001068 ORTHO05D002190 3.0e-18 94.7 70 68.6
Sed0001164 Sechium edule HOM05D001068 ORTHO05D002190 3.0e-18 94.7 70 62.9
Sed0007318 Sechium edule HOM05D001068 ORTHO05D002190 3.0e-18 94.7 70 62.9
CAN.G782.15 Capsicum annuum HOM05D001068 ORTHO05D002190 3.9e-18 94.4 70 65.7
Oeu000573.1 Olea europaea HOM05D001068 ORTHO05D002190 3.9e-18 94.4 70 67.1
BcaB02g06807 Brassica carinata HOM05D001068 ORTHO05D002190 5.1e-18 94.0 70 62.9
Thhalv10006988m.g Eutrema salsugineum HOM05D001068 ORTHO05D002190 5.1e-18 94.0 70 64.3
Thecc.02G188700 Theobroma cacao HOM05D001068 ORTHO05D002190 6.6e-18 93.6 70 65.7
MELO3C019320.2 Cucumis melo HOM05D001068 ORTHO05D002190 8.6e-18 93.2 70 64.3
Lsat_1_v5_gn_4_28520 Lactuca sativa HOM05D001068 ORTHO05D002190 8.6e-18 93.2 70 65.7
Hma1.2p1_0002F.1_g002410 Hydrangea macrophylla HOM05D001068 ORTHO05D002190 1.1e-17 92.8 70 67.1
Cc05_g07930 Coffea canephora HOM05D001068 ORTHO05D002190 2.5e-17 91.7 70 64.3
DCAR_021268 Daucus carota HOM05D001068 ORTHO05D002190 2.5e-17 91.7 70 65.7
ECA234G1381 Erigeron canadensis HOM05D001068 ORTHO05D002190 2.5e-17 91.7 70 62.9
BcaC05g24277 Brassica carinata HOM05D001068 ORTHO05D002190 3.3e-17 91.3 70 62.9
A10p05020 Brassica napus HOM05D001068 ORTHO05D002190 3.3e-17 91.3 70 62.9
C05p04620 Brassica napus HOM05D001068 ORTHO05D002190 3.3e-17 91.3 70 62.9
BolC5t29234H Brassica oleracea HOM05D001068 ORTHO05D002190 3.3e-17 91.3 70 62.9
BraA10t42768Z Brassica rapa HOM05D001068 ORTHO05D002190 3.3e-17 91.3 70 62.9
RcHm_v2.0_Chr7g0206361 Rosa chinensis HOM05D001068 ORTHO05D020111 3.3e-17 91.3 72 65.3
Dinv19990 Davidia involucrata HOM05D001068 ORTHO05D002190 4.3e-17 90.9 81 60.5
HanXRQChr17g0565261 Helianthus annuus HOM05D001068 ORTHO05D002190 4.3e-17 90.9 70 60.0
AL1G16320 Arabidopsis lyrata HOM05D001068 ORTHO05D002190 7.3e-17 90.1 70 61.4
Cpa.g.sc50.2 Carica papaya HOM05D001068 ORTHO05D002190 1.2e-16 89.4 70 64.3
Glyma.06G285400 Glycine max HOM05D001068 ORTHO05D002190 1.2e-16 89.4 70 64.3
EL10Ac9g20848 Beta vulgaris HOM05D001068 ORTHO05D002190 2.1e-16 88.6 70 62.9
Thhalv10009440m.g Eutrema salsugineum HOM05D001068 ORTHO05D002190 2.1e-16 88.6 70 61.4
HanXRQChr17g0565241 Helianthus annuus HOM05D001068 ORTHO05D002190 2.1e-16 88.6 70 60.0
ECA236G4578 Erigeron canadensis HOM05D001068 ORTHO05D002190 2.8e-16 88.2 70 61.4
SGA_v2.0_scaffold258G45790 Striga asiatica HOM05D001068 ORTHO05D002190 2.8e-16 88.2 70 61.4
Gohir.D01G018400 Gossypium hirsutum HOM05D001068 ORTHO05D002190 3.6e-16 87.8 70 60.0
HPP92_027388 Vanilla planifolia HOM05D001068 ORTHO05D002190 3.6e-16 87.8 70 58.6
Sabra13G0102500 Salix brachista HOM05D001068 ORTHO05D002190 4.7e-16 87.4 70 65.7
VMungo1127G1906 Vigna mungo HOM05D001068 ORTHO05D002190 4.7e-16 87.4 70 61.4
Eucgr.K01080 Eucalyptus grandis HOM05D001068 ORTHO05D002190 6.2e-16 87.0 70 64.3
Glyma.12G120300 Glycine max HOM05D001068 ORTHO05D002190 6.2e-16 87.0 70 61.4
Gorai.002G020600 Gossypium raimondii HOM05D001068 ORTHO05D002190 6.2e-16 87.0 70 58.6
Potri.013G123500 Populus trichocarpa HOM05D001068 ORTHO05D002190 6.2e-16 87.0 70 64.3
Sed0014357 Sechium edule HOM05D001068 ORTHO05D002190 6.2e-16 87.0 70 60.0
ATR0602G078 Amborella trichopoda HOM05D001068 ORTHO05D002190 8.1e-16 86.7 70 60.0
AT1G06310 Arabidopsis thaliana HOM05D001068 ORTHO05D002190 8.1e-16 86.7 70 58.6
ECA234G0082 Erigeron canadensis HOM05D001068 ORTHO05D002190 8.1e-16 86.7 70 60.0
AUR62036085 Chenopodium quinoa HOM05D001068 ORTHO05D002190 1.1e-15 86.3 70 62.9
Gohir.A01G019800 Gossypium hirsutum HOM05D001068 ORTHO05D002190 1.1e-15 86.3 70 58.6
arahy.Tifrunner.gnm1.ann1.C7HVNL Arachis hypogaea HOM05D001068 ORTHO05D002190 1.4e-15 85.9 70 64.3
PGR142G0739 Punica granatum HOM05D001068 ORTHO05D002190 1.8e-15 85.5 70 64.3
Ah.01g003900 Amaranthus hybridus HOM05D001068 ORTHO05D002190 2.3e-15 85.1 70 62.9
Os06g0354500 Oryza sativa ssp. japonica HOM05D001068 ORTHO05D002190 2.3e-15 85.1 70 60.0
PSO541G4864 Papaver somniferum HOM05D001068 ORTHO05D002190 2.3e-15 85.1 70 58.6
arahy.Tifrunner.gnm1.ann1.JX5WJ5 Arachis hypogaea HOM05D001068 ORTHO05D002190 3.1e-15 84.7 70 62.9
BcaB02g06804 Brassica carinata HOM05D001068 ORTHO05D002190 3.1e-15 84.7 70 57.1
Phvul.011G116000 Phaseolus vulgaris HOM05D001068 ORTHO05D002190 3.1e-15 84.7 70 58.6
Hund00993 Selenicereus undatus HOM05D001068 ORTHO05D002190 4.0e-15 84.3 70 61.4
Gohir.A01G019900 Gossypium hirsutum HOM05D001068 ORTHO05D002190 5.2e-15 84.0 70 58.6
Zm00001eb148110 Zea mays HOM05D001068 ORTHO05D002190 5.2e-15 84.0 70 61.4
Duzib248G0800 Durio zibethinus HOM05D001068 ORTHO05D002190 1.2e-14 82.8 70 61.4
Gohir.D01G018500 Gossypium hirsutum HOM05D001068 ORTHO05D002190 1.2e-14 82.8 70 58.6
A10p05050 Brassica napus HOM05D001068 ORTHO05D002190 1.5e-14 82.4 71 57.7
BraA10t42771Z Brassica rapa HOM05D001068 ORTHO05D002190 1.5e-14 82.4 71 57.7
Gorai.002G020700 Gossypium raimondii HOM05D001068 ORTHO05D002190 1.5e-14 82.4 70 57.1
DCAR_010695 Daucus carota HOM05D001068 ORTHO05D002190 2.6e-14 81.6 70 62.9
BcaC05g24275 Brassica carinata HOM05D001068 ORTHO05D002190 3.4e-14 81.3 71 57.7
C05p04640 Brassica napus HOM05D001068 ORTHO05D002190 3.4e-14 81.3 71 57.7
BolC5t29237H Brassica oleracea HOM05D001068 ORTHO05D002190 3.4e-14 81.3 71 57.7
PSO675G3167 Papaver somniferum HOM05D001068 ORTHO05D002190 1.3e-13 79.3 70 57.1
DCAR_009762 Daucus carota HOM05D001068 ORTHO05D002190 2.2e-13 78.6 70 58.6
CDE08G0847 Ceratophyllum demersum HOM05D001068 ORTHO05D002190 4.9e-13 77.4 70 55.7
Sc06g0009140 Simmondsia chinensis HOM05D001068 ORTHO05D002190 8.3e-13 76.6 57 64.9
SEGI_20994 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 3.2e-12 74.7 70 58.6
SEGI_21730 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 3.2e-12 74.7 70 58.6
COL.COLO4_04705 Corchorus olitorius HOM05D001068 ORTHO05D002190 5.4e-12 73.9 70 57.1
HanXRQChr16g0526381 Helianthus annuus HOM05D001068 ORTHO05D002190 6.0e-11 70.5 62 56.5
SEGI_29810 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 7.8e-11 70.1 70 55.7
SEGI_33260 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 1.0e-10 69.7 70 55.7
BcaC05g24286 Brassica carinata HOM05D001068 ORTHO05D002190 1.7e-10 68.9 52 65.4
BcaB02g06806 Brassica carinata HOM05D001068 ORTHO05D002190 3.0e-10 68.2 93 40.9
Atru.chr6.2845 Acer truncatum HOM05D001068 ORTHO05D002190 8.6e-10 66.6 40 80.0
MD09G1241500 Malus domestica HOM05D001068 ORTHO05D013681 1.5e-09 65.9 48 64.6
Pp3c13_22370 Physcomitrium patens HOM05D001068 ORTHO05D002190 1.2e-08 62.8 70 47.1
Pp3c26_540 Physcomitrium patens HOM05D001068 ORTHO05D002190 1.6e-08 62.4 70 45.7
AagrBONN_evm.TU.Sc2ySwM_362.999 Anthoceros agrestis HOM05D001068 ORTHO05D002190 3.6e-08 61.2 70 45.7
Mapoly0007s0119 Marchantia polymorpha HOM05D001068 ORTHO05D002190 6.2e-08 60.5 70 45.7
Eucgr.L03435 Eucalyptus grandis HOM05D001068 ORTHO05D013681 1.4e-07 59.3 57 54.4
RcHm_v2.0_Chr6g0266281 Rosa chinensis HOM05D001068 ORTHO05D020111 1.4e-07 59.3 46 67.4
BcaC05g24278 Brassica carinata HOM05D001068 ORTHO05D020111 1.5e-06 55.8 51 52.9
SMO266G0061 Selaginella moellendorffii HOM05D001068 ORTHO05D002190 1.5e-06 55.8 62 46.8
Nitab4.5_0002196g0050 Nicotiana tabacum HOM05D001068 ORTHO05D002190 2.0e-06 55.5 70 47.1


User provided reference genes

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