Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 5.9e-92 340.9 177 100.0
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 1.4e-37 160.2 175 50.9
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 7.1e-37 157.9 172 55.2
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 7.9e-36 154.5 166 51.8
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.3e-35 153.7 177 50.3
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 2.3e-35 152.9 178 53.4
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 3.0e-35 152.5 179 49.7
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 3.9e-35 152.1 177 49.7
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 6.6e-35 151.4 159 54.7
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.5e-34 150.2 152 58.6
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 1.9e-34 149.8 179 49.7
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 7.3e-34 147.9 182 49.5
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.3e-33 147.1 176 48.3
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 1.6e-33 146.7 176 48.3
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 2.1e-33 146.4 175 45.1
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 4.8e-33 145.2 177 47.5
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 6.2e-33 144.8 173 48.0
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 1.1e-32 144.1 169 49.7
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 1.1e-32 144.1 178 47.8
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.4e-32 143.7 179 48.0
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 1.4e-32 143.7 175 45.1
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 4.0e-32 142.1 178 48.3
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 4.0e-32 142.1 180 47.2
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 5.3e-32 141.7 176 48.9
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 6.9e-32 141.4 175 44.6
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 6.9e-32 141.4 175 44.0
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 9.0e-32 141.0 165 47.9
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.2e-31 140.6 169 48.5
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 4.5e-31 138.7 169 49.1
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 5.8e-31 138.3 174 45.4
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.8e-31 138.3 163 48.5
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.8e-31 138.3 163 48.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.3e-30 137.1 175 49.7
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 2.2e-30 136.3 181 47.0
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 2.2e-30 136.3 170 47.6
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.9e-30 136.0 163 47.2
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 8.4e-30 134.4 172 48.8
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 8.4e-30 134.4 144 50.7
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.1e-29 134.0 169 48.5
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.1e-29 134.0 169 48.5
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.1e-29 134.0 169 48.5
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.4e-29 133.7 178 43.8
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.9e-29 133.3 149 49.7
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 3.2e-29 132.5 178 43.8
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 4.2e-29 132.1 155 47.1
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 5.4e-29 131.7 173 46.2
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 5.4e-29 131.7 163 46.6
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 9.3e-29 131.0 181 43.6
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 9.3e-29 131.0 177 46.9
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.2e-28 130.6 169 46.7
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 1.2e-28 130.6 169 46.7
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.6e-28 130.2 165 47.3
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 2.1e-28 129.8 169 47.3
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 2.7e-28 129.4 173 43.9
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 6.0e-28 128.3 166 47.6
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 7.9e-28 127.9 155 47.7
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.0e-27 127.5 169 45.0
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 1.0e-27 127.5 163 45.4
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.8e-27 126.7 150 48.7
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.3e-27 126.3 163 46.6
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 3.0e-27 125.9 177 44.6
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 3.9e-27 125.6 161 44.7
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 1.9e-26 123.2 156 47.4
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 1.9e-26 123.2 182 42.9
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 3.3e-26 122.5 168 43.5
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 3.3e-26 122.5 138 51.4
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 4.3e-26 122.1 170 45.3
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 7.4e-26 121.3 193 39.9
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 9.6e-26 120.9 149 47.0
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 2.1e-25 119.8 152 46.1
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 2.8e-25 119.4 178 43.8
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 2.8e-25 119.4 150 46.7
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 4.8e-25 118.6 151 44.4
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 6.2e-25 118.2 158 44.9
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 6.2e-25 118.2 150 44.7
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 8.1e-25 117.9 166 42.2
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 8.1e-25 117.9 160 43.1
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 1.4e-24 117.1 163 44.2
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 3.1e-24 115.9 161 42.2
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 5.3e-24 115.2 160 43.8
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 6.9e-24 114.8 182 38.5
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.0e-23 113.2 166 43.4
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 4.5e-23 112.1 134 50.7
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 4.5e-23 112.1 180 38.9
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 4.5e-23 112.1 180 38.9
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 5.8e-23 111.7 157 44.6
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 7.6e-23 111.3 166 42.8
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.0e-22 110.9 176 42.0
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 8.4e-22 107.8 178 42.1
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.2e-21 105.9 166 41.6
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 3.5e-20 102.4 153 41.8
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.0e-19 100.9 139 43.9
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 8.7e-19 97.8 130 43.8
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 2.5e-18 96.3 162 38.9
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.3e-18 95.9 160 38.8
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.3e-17 94.0 166 40.4
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 1.1e-16 90.9 114 51.8
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.1e-16 90.9 87 55.2
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 3.1e-16 89.4 145 39.3
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.3e-14 84.0 101 48.5
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 8.4e-14 81.3 115 40.9
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 3.2e-13 79.3 90 46.7
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 9.3e-13 77.8 148 36.5
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.6e-12 77.0 148 36.5
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 6.7e-11 71.6 142 33.8
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.1e-10 70.9 129 38.8
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 9.0e-08 61.2 83 42.2
Os01g0773800 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D049898 2.6e-07 59.7 167 31.7
AL8G32820 Arabidopsis lyrata HOM05D004059 ORTHO05D004591 7.7e-07 58.2 71 45.1
Carub.0008s1744 Capsella rubella HOM05D004059 ORTHO05D004591 1.0e-06 57.8 71 46.5
AT5G56960 Arabidopsis thaliana HOM05D004059 ORTHO05D004591 1.7e-06 57.0 72 44.4
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 1.7e-06 57.0 119 33.6
Thecc.09G087400 Theobroma cacao HOM05D004059 ORTHO05D004591 1.7e-06 57.0 63 52.4
BcaB05g22300 Brassica carinata HOM05D004059 ORTHO05D004591 2.2e-06 56.6 76 46.1
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 2.2e-06 56.6 63 50.8
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 2.9e-06 56.2 110 32.7
BcaB08g36035 Brassica carinata HOM05D004059 ORTHO05D004591 3.8e-06 55.8 59 50.8
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 3.8e-06 55.8 81 43.2
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 3.8e-06 55.8 81 43.2
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 3.8e-06 55.8 81 43.2
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 3.8e-06 55.8 62 50.0
MELO3C015488.2 Cucumis melo HOM05D004059 ORTHO05D004591 5.0e-06 55.5 88 42.0
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 6.5e-06 55.1 63 49.2
CsaV3_1G040580 Cucumis sativus L. HOM05D004059 ORTHO05D004591 6.5e-06 55.1 88 42.0
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 6.5e-06 55.1 63 52.4
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 6.5e-06 55.1 84 41.7
Os01g0196300 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 6.5e-06 55.1 68 44.1
Sed0008144 Sechium edule HOM05D004059 ORTHO05D004591 6.5e-06 55.1 63 49.2
THA.LOC104811746 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 8.5e-06 54.7 83 42.2


User provided reference genes

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