Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 1.1e-206 723.0 364 100.0
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 1.4e-148 530.0 332 79.5
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 5.4e-148 528.1 355 76.1
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 6.6e-146 521.2 319 80.3
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 8.0e-144 514.2 369 72.4
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 2.3e-143 512.7 307 82.4
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 4.0e-143 511.9 355 74.1
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 6.8e-143 511.1 357 73.4
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 2.6e-142 509.2 356 72.8
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 5.8e-142 508.1 363 71.6
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 1.3e-141 506.9 363 71.1
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 1.3e-141 506.9 352 72.4
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 3.7e-141 505.4 311 80.4
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 4.9e-141 505.0 363 70.5
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 8.3e-141 504.2 365 72.1
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 8.3e-141 504.2 363 71.1
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 1.1e-140 503.8 370 69.7
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 1.4e-140 503.4 310 80.3
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 5.4e-140 501.5 368 70.1
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 7.0e-140 501.1 364 72.3
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 2.7e-139 499.2 356 71.3
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 3.5e-139 498.8 371 70.4
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 3.5e-139 498.8 306 80.4
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 7.8e-139 497.7 364 71.2
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 1.0e-138 497.3 362 70.7
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 2.3e-138 496.1 357 72.3
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 6.6e-138 494.6 365 70.7
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 2.5e-137 492.7 364 70.1
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 4.3e-137 491.9 364 70.1
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 5.6e-137 491.5 373 68.6
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 4.7e-136 488.4 364 68.4
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 8.0e-136 487.6 364 67.9
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 2.3e-135 486.1 360 68.3
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 4.0e-135 485.3 360 68.3
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 4.4e-134 481.9 363 67.8
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 4.4e-134 481.9 315 76.5
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 5.8e-134 481.5 304 77.3
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 7.5e-134 481.1 312 74.4
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 9.8e-134 480.7 361 67.9
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 8.3e-133 477.6 362 70.7
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 1.4e-132 476.9 306 75.5
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 2.4e-132 476.1 302 77.2
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 3.2e-132 475.7 306 75.8
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 7.0e-132 474.6 307 76.5
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 1.2e-131 473.8 353 70.3
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 1.6e-131 473.4 365 66.6
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 2.7e-131 472.6 307 76.2
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 2.7e-131 472.6 307 76.2
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 7.8e-131 471.1 303 75.6
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 1.0e-130 470.7 394 62.7
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 1.7e-130 469.9 355 70.4
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 3.0e-130 469.2 303 74.3
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 3.0e-130 469.2 356 68.0
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 3.0e-130 469.2 356 68.5
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 3.0e-130 469.2 300 75.3
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 5.1e-130 468.4 303 74.3
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 1.1e-129 467.2 369 66.1
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 1.1e-129 467.2 352 69.0
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 1.5e-129 466.8 303 74.9
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 4.3e-129 465.3 358 67.6
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 4.3e-129 465.3 361 68.1
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 2.1e-128 463.0 351 68.9
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 3.6e-128 462.2 305 74.4
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 8.1e-128 461.1 387 64.6
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 1.1e-127 460.7 350 68.3
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 6.8e-127 458.0 355 66.5
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 8.9e-127 457.6 366 66.4
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 1.2e-126 457.2 353 68.0
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 1.2e-126 457.2 355 66.5
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 2.0e-126 456.4 291 76.3
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 2.6e-126 456.1 357 67.2
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 2.6e-126 456.1 355 67.9
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 9.9e-126 454.1 354 66.7
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 9.9e-126 454.1 351 67.5
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 1.7e-125 453.4 286 77.6
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 4.9e-125 451.8 283 74.6
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 1.6e-123 446.8 364 62.6
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 2.7e-123 446.0 249 84.3
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 3.5e-123 445.7 308 70.8
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 3.0e-122 442.6 309 70.2
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 1.9e-121 439.9 357 66.1
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 5.6e-121 438.3 311 72.7
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 2.8e-120 436.0 398 57.3
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 2.8e-120 436.0 330 63.9
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 2.8e-120 436.0 356 66.3
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 2.8e-120 436.0 307 69.1
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 1.3e-117 427.2 355 63.4
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 1.3e-117 427.2 346 65.9
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 3.9e-114 415.6 300 67.3
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 4.3e-113 412.1 365 61.9
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 5.3e-111 405.2 290 72.4
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 2.9e-109 399.4 297 68.0
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 1.9e-108 396.7 361 59.0
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 3.3e-105 386.0 245 77.1
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 9.6e-105 384.4 264 69.3
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 6.4e-101 371.7 278 66.2
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 3.0e-98 362.8 300 61.0
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 8.7e-90 334.7 342 52.9
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 1.9e-89 333.6 325 56.6
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 3.7e-88 329.3 305 53.8
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 4.8e-88 328.9 308 57.1
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 7.6e-86 321.6 341 55.1
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 5.1e-82 308.9 363 52.3
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 7.7e-78 295.0 325 49.5
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 2.2e-77 293.5 281 54.4
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 3.8e-77 292.7 320 52.5
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 1.8e-74 283.9 246 60.6
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 5.9e-70 268.9 208 65.4
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 2.7e-67 260.0 169 76.3
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 7.2e-60 235.3 171 68.4
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 1.8e-58 230.7 200 64.0
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 2.7e-51 206.8 368 37.0
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 2.0e-49 200.7 213 53.5
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 2.0e-46 190.7 341 35.5
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 3.2e-44 183.3 232 49.6
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 1.8e-42 177.6 183 55.2
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 9.8e-41 171.8 169 57.4
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 1.3e-29 134.8 80 81.2
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 1.3e-13 81.6 83 44.6
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 1.3e-13 81.6 61 59.0
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 9.5e-12 75.5 45 68.9
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.1e-11 74.3 47 76.6
arahy.Tifrunner.gnm1.ann1.Y836FI Arachis hypogaea HOM05D000158 ORTHO05D000197 1.8e-10 71.2 39 79.5
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.3e-10 70.9 53 67.9
AUR62038172 Chenopodium quinoa HOM05D006503 ORTHO05D008116 3.1e-10 70.5 103 40.8
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 5.2e-10 69.7 88 52.3
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 6.8e-10 69.3 73 49.3
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 2.4e-07 60.8 38 84.2


User provided reference genes

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