Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.3e-134 483.0 244 100.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.5e-119 431.8 235 90.6
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.7e-118 429.5 235 90.2
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 5.6e-117 424.5 240 86.2
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.4e-115 419.9 240 85.8
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 6.9e-115 417.5 240 83.8
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.0e-114 416.0 241 83.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 7.6e-114 414.1 233 86.3
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 2.9e-113 412.1 245 85.7
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 6.4e-113 411.0 240 82.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 3.2e-112 408.7 240 82.5
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 4.2e-112 408.3 236 83.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 7.1e-112 407.5 240 84.2
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.3e-112 407.1 237 81.4
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.2e-111 406.8 240 81.2
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 2.7e-111 405.6 231 85.3
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 4.6e-111 404.8 240 80.8
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 4.6e-111 404.8 240 82.5
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.6e-111 404.8 240 80.4
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 4.6e-111 404.8 240 82.5
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.0e-110 403.7 240 80.0
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 1.7e-110 402.9 236 80.5
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.3e-110 402.5 240 80.8
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.3e-110 402.5 240 80.8
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 3.9e-110 401.7 236 80.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 6.6e-110 401.0 233 82.4
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 6.6e-110 401.0 221 88.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 3.3e-109 398.7 240 80.8
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 4.3e-109 398.3 238 82.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 5.6e-109 397.9 240 82.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 5.6e-109 397.9 240 80.0
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 5.6e-109 397.9 237 81.9
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 5.6e-109 397.9 254 79.9
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.1e-108 396.0 252 77.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.8e-108 395.6 240 80.0
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 3.6e-108 395.2 240 79.6
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 3.6e-108 395.2 240 80.4
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 4.8e-108 394.8 240 80.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 6.2e-108 394.4 263 76.4
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 8.1e-108 394.0 240 80.0
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.1e-107 393.7 236 81.4
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.4e-107 393.3 240 79.2
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.4e-107 393.3 240 79.2
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.8e-107 392.9 240 78.8
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.8e-107 392.9 248 78.2
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.8e-107 392.9 233 80.7
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 3.1e-107 392.1 241 77.6
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 4.5e-106 388.3 233 79.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.6e-106 387.5 240 77.1
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 7.6e-106 387.5 229 82.1
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.3e-105 386.7 233 79.0
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.3e-105 386.7 263 72.2
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.2e-105 386.0 241 80.1
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.8e-105 385.2 240 77.1
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 4.9e-105 384.8 240 77.9
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.9e-105 384.8 240 76.7
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.9e-105 384.8 240 76.7
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 4.9e-105 384.8 240 77.9
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.4e-105 384.4 240 76.7
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 6.4e-105 384.4 240 76.7
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 8.4e-105 384.0 240 76.7
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 8.4e-105 384.0 239 77.0
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 78.8
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.9e-104 382.9 240 76.2
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.2e-104 382.1 240 77.1
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.2e-104 382.1 240 76.2
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.4e-104 381.3 223 80.3
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.7e-103 379.0 241 77.6
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 6.0e-103 377.9 229 79.5
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.0e-102 377.1 237 78.1
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.8e-102 376.3 233 75.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.3e-102 375.9 229 78.6
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.7e-102 374.4 232 81.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 8.7e-102 374.0 242 74.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 9.6e-101 370.5 241 75.1
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.2e-100 367.9 238 73.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.2e-98 363.6 240 70.8
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.5e-98 363.2 240 75.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.5e-98 363.2 282 66.0
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 7.6e-98 360.9 209 85.6
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.4e-97 357.8 261 68.6
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.4e-96 356.7 227 75.3
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.9e-96 356.3 227 74.9
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.2e-96 355.1 227 74.9
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 7.1e-96 354.4 210 83.3
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.2e-95 353.6 238 74.8
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 9.6e-93 344.0 249 68.7
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 3.7e-92 342.0 240 71.2
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.1e-91 339.0 258 65.9
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.8e-86 323.2 242 71.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.3e-85 318.5 191 82.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 9.7e-85 317.4 268 64.6
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.3e-84 317.0 195 77.4
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 8.2e-84 314.3 234 63.7
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.4e-83 313.5 232 69.0
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.8e-83 313.2 226 64.6
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 3.4e-82 308.9 195 78.5
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 9.4e-80 300.8 211 70.1
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.8e-76 289.3 196 75.5
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.1e-75 285.8 306 52.3
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.0e-74 283.1 238 58.4
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 3.4e-74 282.3 177 79.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 3.9e-70 268.9 225 59.1
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 3.1e-67 259.2 225 56.0
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-66 256.1 231 60.6
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 6.5e-65 251.5 160 75.0
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.5e-64 249.6 196 67.9
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-62 242.7 184 67.9
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-62 242.7 184 67.9
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-60 237.3 151 77.5
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 7.0e-59 231.5 220 50.9
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 7.7e-50 201.4 122 78.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.4e-45 186.0 128 73.4
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.5e-40 169.9 164 56.1
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.5e-37 160.6 93 88.2
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 4.4e-37 159.1 121 66.9
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 7.5e-29 131.7 92 72.8
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.1e-27 125.9 91 73.6
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.6e-26 124.0 61 96.7
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.1e-24 117.9 71 74.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 2.3e-22 110.2 55 90.9
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 9.8e-21 104.8 104 58.7
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.9e-17 92.8 65 70.8
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 9.9e-13 78.2 152 31.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.0e-09 68.2 77 49.4


User provided reference genes

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