Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 1.5e-33 145.6 71 100.0
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 1.6e-32 142.1 71 97.2
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 7.0e-20 100.1 58 79.3
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 7.0e-20 100.1 63 71.4
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 9.2e-20 99.8 59 78.0
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 9.2e-20 99.8 58 79.3
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.2e-19 99.4 57 78.9
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 1.6e-19 99.0 58 77.6
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 1.6e-19 99.0 58 77.6
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 1.6e-19 99.0 58 77.6
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.1e-19 98.6 58 75.9
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.1e-19 98.6 58 75.9
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 2.7e-19 98.2 58 74.1
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 2.7e-19 98.2 58 75.9
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 3.5e-19 97.8 56 78.6
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 3.5e-19 97.8 58 75.9
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 3.5e-19 97.8 58 75.9
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 4.6e-19 97.4 58 75.9
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 4.6e-19 97.4 57 77.2
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.6e-19 97.4 59 74.6
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.6e-19 97.4 59 74.6
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 4.6e-19 97.4 57 77.2
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 4.6e-19 97.4 59 74.6
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 6.0e-19 97.1 58 74.1
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 6.0e-19 97.1 59 74.6
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 6.0e-19 97.1 58 74.1
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 6.0e-19 97.1 58 74.1
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 6.0e-19 97.1 57 77.2
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 6.0e-19 97.1 63 68.3
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 6.0e-19 97.1 56 76.8
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 7.8e-19 96.7 59 72.9
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 7.8e-19 96.7 58 75.9
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 7.8e-19 96.7 57 75.4
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 7.8e-19 96.7 58 74.1
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 7.8e-19 96.7 58 74.1
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 7.8e-19 96.7 58 74.1
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 1.0e-18 96.3 63 68.3
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 1.0e-18 96.3 63 68.3
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 1.0e-18 96.3 58 74.1
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.3e-18 95.9 56 78.6
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 1.3e-18 95.9 59 72.9
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 1.3e-18 95.9 58 72.4
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 1.3e-18 95.9 58 72.4
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 1.3e-18 95.9 58 72.4
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 1.7e-18 95.5 57 75.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.7e-18 95.5 57 75.4
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.7e-18 95.5 57 75.4
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.7e-18 95.5 57 75.4
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 1.7e-18 95.5 58 72.4
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 1.7e-18 95.5 59 69.5
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 1.7e-18 95.5 58 72.4
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 1.7e-18 95.5 58 72.4
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 1.7e-18 95.5 58 74.1
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 2.3e-18 95.1 57 73.7
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 2.3e-18 95.1 59 72.9
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 3.0e-18 94.7 57 71.9
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 3.0e-18 94.7 58 74.1
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 3.0e-18 94.7 57 73.7
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 3.9e-18 94.4 57 71.9
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 70.7
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 70.7
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 72.4
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 3.9e-18 94.4 56 73.2
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 72.4
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 72.4
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 72.4
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 3.9e-18 94.4 59 72.9
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 3.9e-18 94.4 58 74.1
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 5.1e-18 94.0 58 70.7
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 5.1e-18 94.0 58 70.7
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 6.6e-18 93.6 58 69.0
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 6.6e-18 93.6 61 72.1
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 6.6e-18 93.6 57 70.2
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 6.6e-18 93.6 58 70.7
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 6.6e-18 93.6 58 69.0
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 8.6e-18 93.2 56 73.2
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 8.6e-18 93.2 57 68.4
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 8.6e-18 93.2 53 79.2
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 8.6e-18 93.2 57 71.9
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 8.6e-18 93.2 57 73.7
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 8.6e-18 93.2 57 71.9
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 8.6e-18 93.2 58 69.0
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 8.6e-18 93.2 57 71.9
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 1.1e-17 92.8 58 69.0
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 1.1e-17 92.8 56 71.4
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 1.1e-17 92.8 57 70.2
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 1.1e-17 92.8 58 70.7
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 1.1e-17 92.8 58 72.4
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 1.5e-17 92.4 57 68.4
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 1.5e-17 92.4 57 68.4
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.5e-17 92.4 56 71.4
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 1.5e-17 92.4 58 72.4
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.5e-17 92.4 59 71.2
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.5e-17 92.4 58 69.0
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 1.5e-17 92.4 59 71.2
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.9e-17 92.0 57 68.4
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.9e-17 92.0 59 71.2
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 2.5e-17 91.7 58 67.2
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 2.5e-17 91.7 63 61.9
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 2.5e-17 91.7 55 76.4
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.5e-17 91.7 58 69.0
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 3.3e-17 91.3 56 69.6
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 4.3e-17 90.9 54 68.5
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 4.3e-17 90.9 58 69.0
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 5.6e-17 90.5 57 68.4
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 5.6e-17 90.5 57 68.4
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 7.3e-17 90.1 58 65.5
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.6e-16 89.0 53 71.7
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.6e-16 89.0 56 67.9
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 2.8e-16 88.2 56 66.1
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 1.2e-14 82.8 57 59.6
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 2.6e-14 81.6 50 66.0
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 3.4e-14 81.3 54 61.1
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 7.1e-12 73.6 45 75.6
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.1e-11 72.0 54 63.0
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 7.3e-09 63.5 40 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 9.5e-09 63.2 89 34.8
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 2.8e-08 61.6 44 59.1
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 2.4e-07 58.5 40 67.5
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 6.8e-07 57.0 37 67.6


User provided reference genes

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