Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 9.2e-159 564.7 410 100.0
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 4.5e-89 333.2 444 66.7
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.0e-88 332.0 444 66.7
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.5e-87 327.4 429 68.5
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 3.6e-86 323.6 429 66.7
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 4.4e-84 316.6 448 65.2
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 8.2e-83 312.4 427 65.6
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.4e-82 310.8 443 63.9
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 4.2e-79 300.1 430 64.9
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.2e-78 298.5 444 63.5
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-78 298.1 450 63.1
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-78 298.1 450 63.1
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 2.1e-78 297.7 430 64.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 2.7e-78 297.4 430 64.4
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 3.0e-77 293.9 431 64.0
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 8.8e-77 292.4 383 69.2
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 8.8e-77 292.4 433 63.7
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 3.4e-76 290.4 448 61.8
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 4.4e-76 290.0 433 64.0
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.3e-75 288.5 392 65.1
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.3e-75 288.5 431 63.3
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 1.3e-75 288.5 385 66.2
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.2e-75 287.7 391 66.5
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 3.7e-75 287.0 451 61.4
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 4.8e-75 286.6 382 67.0
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 6.3e-75 286.2 361 65.4
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 7.0e-74 282.7 426 61.5
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 1.2e-73 282.0 447 61.5
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 3.5e-73 280.4 381 67.2
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.3e-72 278.5 386 67.1
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 2.2e-72 277.7 444 59.0
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 2.2e-72 277.7 391 62.7
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 1.9e-71 274.6 391 62.7
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 3.2e-71 273.9 389 66.3
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 3.2e-71 273.9 385 67.0
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 5.5e-71 273.1 391 65.2
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 7.2e-71 272.7 390 65.9
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 2.7e-70 270.8 207 65.7
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.0e-69 268.9 383 66.1
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.4e-69 268.5 402 63.9
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 1.4e-69 268.5 388 66.2
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.8e-69 268.1 402 63.9
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.8e-69 268.1 375 66.7
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.0e-69 267.3 385 65.7
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 6.8e-69 266.2 377 66.8
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.8e-69 266.2 385 65.5
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 8.8e-69 265.8 383 66.1
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 2.6e-68 264.2 385 65.5
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 2.6e-68 264.2 448 59.4
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 4.4e-68 263.5 391 61.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 5.7e-68 263.1 389 65.6
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 7.5e-68 262.7 389 65.0
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 1.7e-67 261.5 380 64.7
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.7e-67 261.5 383 65.3
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 2.8e-67 260.8 373 66.0
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 3.7e-67 260.4 386 66.3
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 1.1e-66 258.8 381 65.1
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 1.4e-66 258.5 381 65.4
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 2.4e-66 257.7 429 58.3
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 4.1e-66 256.9 387 64.3
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 5.4e-66 256.5 395 63.8
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 7.0e-66 256.1 386 65.5
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 5.9e-65 253.1 383 63.4
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 7.7e-65 252.7 390 63.1
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 2.9e-64 250.8 383 63.7
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 3.8e-64 250.4 390 62.8
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 5.0e-64 250.0 383 63.2
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 5.0e-64 250.0 383 63.2
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 6.6e-64 249.6 383 63.4
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 6.6e-64 249.6 390 62.6
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 3.3e-63 247.3 456 56.4
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 4.2e-63 246.9 389 41.1
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 5.5e-63 246.5 377 63.4
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 9.5e-63 245.7 383 62.9
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 2.1e-62 244.6 435 59.1
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.8e-61 241.5 391 62.1
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 4.0e-61 240.4 380 62.4
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.7e-60 236.5 468 36.1
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 2.9e-59 234.2 445 56.6
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.7e-59 233.8 389 56.3
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.4e-58 231.1 206 56.8
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 1.2e-57 228.8 372 59.1
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 2.0e-57 228.0 391 60.4
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.9e-56 223.8 205 56.6
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.6e-54 218.4 383 59.8
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 2.8e-54 217.6 383 60.1
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 6.1e-54 216.5 383 59.8
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 8.0e-54 216.1 370 56.2
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 3.2e-50 204.1 396 39.9
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 2.6e-44 184.5 370 54.9
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 3.1e-37 161.0 135 59.3
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 2.2e-35 154.8 267 65.9
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.6e-30 137.5 207 41.5
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 9.6e-23 112.8 166 39.2
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 3.8e-19 100.9 54 83.3
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 6.4e-19 100.1 54 83.3
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 1.1e-18 99.4 115 48.7
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.1e-18 99.4 54 81.5
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 3.2e-18 97.8 54 77.8
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.4e-18 97.1 54 79.6
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 1.6e-17 95.5 54 83.3
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 6.0e-17 93.6 51 80.4
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.0e-16 92.8 54 74.1
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 5.6e-15 87.0 54 72.2
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.0e-08 66.2 33 81.8
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.6e-06 58.9 148 27.0
Os12g0456100 Oryza sativa ssp. japonica HOM05D006596 ORTHO05D008497 8.1e-06 56.6 173 25.4


User provided reference genes

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