Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 6.8e-96 354.0 178 100.0
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 3.0e-83 312.0 178 88.2
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 2.5e-82 308.9 178 88.8
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 4.3e-82 308.1 178 86.0
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 9.5e-82 307.0 178 88.8
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 2.1e-81 305.8 178 87.1
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 2.1e-81 305.8 178 86.0
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 2.8e-81 305.4 180 86.1
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 1.8e-80 302.8 178 84.8
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 2.3e-80 302.4 179 86.6
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 3.1e-80 302.0 178 84.8
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 5.2e-80 301.2 181 86.2
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 5.8e-79 297.7 179 87.2
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 7.5e-79 297.4 177 84.7
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 9.9e-79 297.0 179 83.2
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 9.9e-79 297.0 179 83.8
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 9.9e-79 297.0 179 83.8
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 2.2e-78 295.8 176 84.7
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 1.9e-77 292.7 179 84.4
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 2.4e-77 292.4 166 88.0
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 3.2e-77 292.0 180 83.9
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 3.5e-76 288.5 171 84.8
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 3.5e-76 288.5 174 84.5
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 6.0e-76 287.7 171 84.8
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 1.0e-75 287.0 178 82.6
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 1.7e-75 286.2 178 84.3
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 1.7e-75 286.2 179 81.6
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 2.3e-75 285.8 180 81.7
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 3.0e-75 285.4 171 84.2
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 5.1e-75 284.6 171 83.6
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 5.1e-75 284.6 182 80.2
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 6.6e-75 284.3 178 79.2
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 6.6e-75 284.3 174 82.2
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 8.6e-75 283.9 178 82.0
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 2.5e-74 282.3 185 80.5
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 2.5e-74 282.3 185 80.5
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 4.3e-74 281.6 185 79.5
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 5.6e-74 281.2 171 81.3
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 5.6e-74 281.2 178 79.8
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.6e-73 279.6 179 81.0
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 1.6e-73 279.6 178 79.2
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 1.6e-73 279.6 178 79.2
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.1e-73 279.3 178 79.2
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 2.1e-73 279.3 171 80.7
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 2.1e-73 279.3 171 80.7
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 2.1e-73 279.3 185 79.5
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 3.6e-73 278.5 185 78.9
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 4.7e-73 278.1 194 77.3
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 1.4e-72 276.6 176 80.7
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.4e-72 276.6 171 80.1
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 2.3e-72 275.8 178 78.1
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 2.3e-72 275.8 178 80.9
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 3.1e-72 275.4 178 79.8
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 3.1e-72 275.4 178 79.8
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 3.1e-72 275.4 180 81.7
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 4.0e-72 275.0 174 79.3
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 4.0e-72 275.0 179 79.9
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 4.0e-72 275.0 178 79.2
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 4.0e-72 275.0 181 77.9
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 5.2e-72 274.6 178 79.2
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 5.2e-72 274.6 177 80.2
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 6.8e-72 274.2 178 79.2
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 6.8e-72 274.2 178 79.2
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 6.8e-72 274.2 173 80.3
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 2.0e-71 272.7 178 77.0
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 2.6e-71 272.3 185 76.2
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 2.6e-71 272.3 174 80.5
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 2.6e-71 272.3 178 78.1
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 2.6e-71 272.3 178 79.8
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 4.4e-71 271.6 178 78.7
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 4.4e-71 271.6 178 77.5
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 5.8e-71 271.2 171 80.7
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 9.9e-71 270.4 179 79.3
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 1.7e-70 269.6 181 76.2
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 2.9e-70 268.9 176 78.4
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 2.9e-70 268.9 180 76.7
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 3.8e-70 268.5 178 81.5
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 6.4e-70 267.7 178 75.8
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 8.4e-70 267.3 165 82.4
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 1.9e-69 266.2 179 76.5
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 1.2e-68 263.5 173 78.6
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 2.1e-68 262.7 175 80.0
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 3.5e-68 261.9 178 79.2
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 6.0e-68 261.2 169 79.9
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 2.3e-67 259.2 182 74.2
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 3.9e-67 258.5 175 73.1
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 5.1e-67 258.1 182 77.5
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 5.1e-67 258.1 182 77.5
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 5.1e-67 258.1 180 75.0
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 8.6e-67 257.3 176 75.0
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 5.6e-66 254.6 181 73.5
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 1.2e-65 253.4 173 78.0
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 1.6e-65 253.1 178 74.7
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 1.6e-65 253.1 183 71.0
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 1.6e-65 253.1 174 75.3
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 2.1e-65 252.7 173 72.8
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 2.1e-65 252.7 174 75.3
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 2.8e-65 252.3 182 72.5
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 4.7e-65 251.5 184 72.3
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 1.4e-64 250.0 179 73.7
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.4e-64 250.0 173 74.0
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.4e-64 250.0 173 74.0
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 1.4e-64 250.0 177 72.3
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 1.8e-64 249.6 179 71.5
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 3.1e-64 248.8 175 73.1
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 5.2e-64 248.1 174 71.8
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 5.2e-64 248.1 179 70.9
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 6.9e-64 247.7 173 74.6
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 1.2e-63 246.9 177 73.4
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 4.4e-63 245.0 178 68.5
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 9.9e-63 243.8 178 73.0
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 1.3e-62 243.4 179 70.4
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 2.2e-62 242.7 174 70.1
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 6.4e-62 241.1 174 71.3
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 7.1e-61 237.7 171 71.9
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 7.1e-61 237.7 179 69.3
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 9.3e-61 237.3 174 73.6
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 1.6e-60 236.5 142 81.0
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 3.5e-60 235.3 172 72.7
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 7.8e-60 234.2 180 69.4
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 1.0e-59 233.8 176 68.2
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 3.0e-59 232.3 158 75.9
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 3.0e-59 232.3 144 77.8
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 5.1e-59 231.5 174 70.1
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 6.6e-59 231.1 174 72.4
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 1.6e-57 226.5 137 81.8
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 2.8e-57 225.7 132 86.4
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 1.2e-55 220.3 194 66.5
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 2.6e-55 219.2 248 52.8
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 4.2e-53 211.8 165 69.1
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 4.6e-52 208.4 121 83.5
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 3.0e-51 205.7 179 64.2
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 5.6e-50 201.4 179 59.2
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 4.5e-47 191.8 143 62.9
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 5.8e-47 191.4 193 59.1
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 1.7e-46 189.9 184 57.1
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 6.4e-46 188.0 194 57.7
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 1.9e-45 186.4 157 59.2
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 3.0e-43 179.1 184 53.8
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 1.0e-38 164.1 182 52.2
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.5e-37 159.5 89 84.3
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 5.5e-37 158.3 117 72.6
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 2.1e-36 156.4 130 62.3
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.3e-35 153.7 173 51.4
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.9e-35 152.1 86 83.7
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.5e-34 149.4 86 81.4
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 1.8e-32 143.3 132 58.3
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 1.8e-32 143.3 89 80.9
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 1.2e-31 140.6 118 65.3
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 1.5e-31 140.2 133 59.4
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.2e-23 114.0 84 66.7
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 2.6e-23 112.8 104 60.6
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 2.6e-23 112.8 104 60.6
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 5.9e-23 111.7 127 48.0
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 6.5e-22 108.2 125 43.2
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 8.5e-22 107.8 85 64.7
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 9.4e-21 104.4 105 45.7
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 2.6e-18 96.3 157 36.3
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 4.1e-16 89.0 46 87.0
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 1.4e-13 80.5 65 63.1
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 9.4e-13 77.8 80 52.5
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 1.6e-12 77.0 77 57.1
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 8.0e-12 74.7 193 34.2
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 5.2e-11 72.0 89 39.3
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 1.8e-08 63.5 85 44.7


User provided reference genes

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