Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015866001 Vitis vinifera HOM05D000660 ORTHO05D022875 8.9e-53 209.9 100 100.0
GSVIVG01015861001 Vitis vinifera HOM05D000660 ORTHO05D022875 1.2e-49 199.5 100 96.0
GSVIVG01017670001 Vitis vinifera HOM05D000660 ORTHO05D000766 3.8e-27 124.8 78 75.6
Dinv29529 Davidia involucrata HOM05D000660 ORTHO05D000766 3.6e-22 108.2 81 58.0
TAR365G0600 Trochodendron aralioides HOM05D000660 ORTHO05D000766 6.2e-22 107.5 67 71.6
CiPaw.02G071100 Carya illinoinensis HOM05D000660 ORTHO05D000766 5.3e-21 104.4 82 61.0
Thecc.04G310200 Theobroma cacao HOM05D000660 ORTHO05D000766 6.9e-21 104.0 63 74.6
CSS0032960 Camellia sinensis var. sinensis HOM05D000660 ORTHO05D000766 2.6e-20 102.1 61 73.8
Manes.03G210600 Manihot esculenta HOM05D000660 ORTHO05D000766 2.6e-20 102.1 64 70.3
Hma1.2p1_0013F.1_g007980 Hydrangea macrophylla HOM05D000660 ORTHO05D000766 3.4e-20 101.7 77 59.7
Potri.010G153100 Populus trichocarpa HOM05D000660 ORTHO05D000766 7.6e-20 100.5 63 69.8
Duzib151G0390 Durio zibethinus HOM05D000660 ORTHO05D000766 2.9e-19 98.6 63 69.8
Sabra10G0117700 Salix brachista HOM05D000660 ORTHO05D000766 2.9e-19 98.6 63 68.3
TAR362G0770 Trochodendron aralioides HOM05D000660 ORTHO05D000766 1.4e-18 96.3 76 67.1
Aqoxy2G02561 Aquilegia oxysepala HOM05D000660 ORTHO05D000766 5.4e-18 94.4 65 66.2
Cfa015716 Carpinus fangiana HOM05D000660 ORTHO05D000766 5.4e-18 94.4 58 72.4
Haze_00797 Corylus avellana HOM05D000660 ORTHO05D000766 5.4e-18 94.4 58 72.4
Rhsim04G0246900 Rhododendron simsii HOM05D000660 ORTHO05D000766 7.1e-18 94.0 50 82.0
Actinidia18500 Actinidia chinensis HOM05D000660 ORTHO05D000766 1.2e-17 93.2 82 59.8
Nn3g21872 Nelumbo nucifera HOM05D000660 ORTHO05D000766 1.2e-17 93.2 59 72.9
Gorai.011G204700 Gossypium raimondii HOM05D000660 ORTHO05D000766 1.6e-17 92.8 59 69.5
QL06p013787 Quercus lobata HOM05D000660 ORTHO05D000766 1.6e-17 92.8 84 54.8
TAR636G1649 Trochodendron aralioides HOM05D000660 ORTHO05D000766 2.7e-17 92.0 59 71.2
Cpa.g.sc146.41 Carica papaya HOM05D000660 ORTHO05D000766 3.5e-17 91.7 71 59.2
CiPaw.01G131100 Carya illinoinensis HOM05D000660 ORTHO05D000766 4.6e-17 91.3 54 77.8
ATR0796G020 Amborella trichopoda HOM05D000660 ORTHO05D000766 6.0e-17 90.9 61 68.9
Ciclev10004234m.g Citrus clementina HOM05D000660 ORTHO05D000766 6.0e-17 90.9 46 84.8
Atru.chr4.3127 Acer truncatum HOM05D000660 ORTHO05D000766 7.9e-17 90.5 54 72.2
Gohir.A10G176100 Gossypium hirsutum HOM05D000660 ORTHO05D000766 7.9e-17 90.5 53 75.5
Gohir.D10G182700 Gossypium hirsutum HOM05D000660 ORTHO05D000766 7.9e-17 90.5 59 67.8
CANSAT78G1470 Cannabis sativa HOM05D000660 ORTHO05D000766 1.0e-16 90.1 59 67.8
Glyma.17G038800 Glycine max HOM05D000660 ORTHO05D000766 8.7e-16 87.0 70 58.6
PSO210G1806 Papaver somniferum HOM05D000660 ORTHO05D000766 1.1e-15 86.7 75 56.0
PSO761G0346 Papaver somniferum HOM05D000660 ORTHO05D000766 1.1e-15 86.7 75 56.0
Prupe.1G108700 Prunus persica HOM05D000660 ORTHO05D000766 1.1e-15 86.7 63 61.9
Eucgr.I02632 Eucalyptus grandis HOM05D000660 ORTHO05D000766 1.5e-15 86.3 59 62.7
PGSC0003DMG400014978 Solanum tuberosum HOM05D000660 ORTHO05D000766 2.5e-15 85.5 60 63.3
TPR.G12697 Trifolium pratense HOM05D000660 ORTHO05D000766 2.5e-15 85.5 52 71.2
MBI02_g35301_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D022875 3.3e-15 85.1 63 61.9
MBI04_g14365_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D022875 3.3e-15 85.1 63 61.9
MBI19_g32711_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D000766 3.3e-15 85.1 63 61.9
RcHm_v2.0_Chr7g0219321 Rosa chinensis HOM05D000660 ORTHO05D000766 5.6e-15 84.3 70 54.3
VMungo1215G2493 Vigna mungo HOM05D000660 ORTHO05D000766 1.3e-14 83.2 71 53.5
TWI73G0654 Tripterygium wilfordii HOM05D000660 ORTHO05D000766 1.6e-14 82.8 61 62.3
Phvul.003G119800 Phaseolus vulgaris HOM05D000660 ORTHO05D000766 6.2e-14 80.9 67 56.7
MBI18_g28905_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D000766 8.1e-14 80.5 63 61.9
FAN18G0042 Fragaria x ananassa HOM05D000660 ORTHO05D000766 1.8e-13 79.3 88 44.3
MD13G1144300 Malus domestica HOM05D000660 ORTHO05D000766 2.4e-13 79.0 45 75.6
MD16G1139100 Malus domestica HOM05D000660 ORTHO05D022875 2.4e-13 79.0 45 75.6
FvH4_5g27670 Fragaria vesca HOM05D000660 ORTHO05D000766 3.1e-13 78.6 45 73.3
FAN08G1179 Fragaria x ananassa HOM05D000660 ORTHO05D000766 3.1e-13 78.6 45 73.3
FAN13G0923 Fragaria x ananassa HOM05D000660 ORTHO05D000766 3.1e-13 78.6 45 73.3
ClCG04G007430 Citrullus lanatus HOM05D000660 ORTHO05D000766 5.3e-13 77.8 58 62.1
FAN04G0159 Fragaria x ananassa HOM05D000660 ORTHO05D000766 9.0e-13 77.0 45 71.1
Sed0000873 Sechium edule HOM05D000660 ORTHO05D000766 2.6e-12 75.5 66 53.0
CsaV3_4G025820 Cucumis sativus L. HOM05D000660 ORTHO05D000766 3.4e-12 75.1 57 61.4
Nitab4.5_0000992g0020 Nicotiana tabacum HOM05D000660 ORTHO05D000766 1.3e-11 73.2 59 61.0
MELO3C003208.2 Cucumis melo HOM05D000660 ORTHO05D000766 2.9e-11 72.0 78 48.7
Lalb_Chr12g0200691 Lupinus albus HOM05D000660 ORTHO05D000766 2.9e-11 72.0 85 40.0
Solyc01g057270.4 Solanum lycopersicum HOM05D000660 ORTHO05D000766 6.5e-11 70.9 60 56.7
Lsat_1_v5_gn_1_40580 Lactuca sativa HOM05D000660 ORTHO05D000766 5.5e-10 67.8 50 62.0
SEGI_25746 Sequoiadendron giganteum HOM05D000660 ORTHO05D000766 9.3e-10 67.0 51 58.8
SEGI_31550 Sequoiadendron giganteum HOM05D000660 ORTHO05D000766 9.3e-10 67.0 51 58.8
COL.COLO4_31767 Corchorus olitorius HOM05D000660 ORTHO05D000766 1.3e-08 63.2 53 56.6
vmacro07996 Vaccinium macrocarpon HOM05D000660 ORTHO05D000766 6.7e-08 60.8 42 66.7
CDE11G0747 Ceratophyllum demersum HOM05D000660 ORTHO05D000766 2.1e-06 55.8 85 42.4


User provided reference genes

Program Settings