Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015861001 Vitis vinifera HOM05D000660 ORTHO05D022875 3.1e-53 211.5 100 100.0
GSVIVG01015866001 Vitis vinifera HOM05D000660 ORTHO05D022875 1.6e-49 199.1 100 96.0
GSVIVG01017670001 Vitis vinifera HOM05D000660 ORTHO05D000766 9.3e-26 120.2 78 73.1
Dinv29529 Davidia involucrata HOM05D000660 ORTHO05D000766 6.9e-21 104.0 89 53.9
TAR365G0600 Trochodendron aralioides HOM05D000660 ORTHO05D000766 1.5e-20 102.8 67 68.7
Thecc.04G310200 Theobroma cacao HOM05D000660 ORTHO05D000766 2.0e-20 102.4 63 73.0
CiPaw.02G071100 Carya illinoinensis HOM05D000660 ORTHO05D000766 9.9e-20 100.1 82 58.5
Hma1.2p1_0013F.1_g007980 Hydrangea macrophylla HOM05D000660 ORTHO05D000766 9.9e-20 100.1 87 56.3
Manes.03G210600 Manihot esculenta HOM05D000660 ORTHO05D000766 9.9e-20 100.1 64 70.3
Potri.010G153100 Populus trichocarpa HOM05D000660 ORTHO05D000766 2.2e-19 99.0 63 69.8
CSS0032960 Camellia sinensis var. sinensis HOM05D000660 ORTHO05D000766 2.9e-19 98.6 89 55.1
Duzib151G0390 Durio zibethinus HOM05D000660 ORTHO05D000766 8.4e-19 97.1 63 68.3
Sabra10G0117700 Salix brachista HOM05D000660 ORTHO05D000766 8.4e-19 97.1 63 68.3
TAR362G0770 Trochodendron aralioides HOM05D000660 ORTHO05D000766 1.6e-17 92.8 76 64.5
Rhsim04G0246900 Rhododendron simsii HOM05D000660 ORTHO05D000766 2.1e-17 92.4 50 82.0
Actinidia18500 Actinidia chinensis HOM05D000660 ORTHO05D000766 3.5e-17 91.7 82 58.5
Cpa.g.sc146.41 Carica papaya HOM05D000660 ORTHO05D000766 3.5e-17 91.7 88 53.4
Gorai.011G204700 Gossypium raimondii HOM05D000660 ORTHO05D000766 6.0e-17 90.9 59 67.8
Nn3g21872 Nelumbo nucifera HOM05D000660 ORTHO05D000766 1.0e-16 90.1 59 71.2
Aqoxy2G02561 Aquilegia oxysepala HOM05D000660 ORTHO05D000766 1.3e-16 89.7 65 63.1
Cfa015716 Carpinus fangiana HOM05D000660 ORTHO05D000766 1.3e-16 89.7 58 69.0
Haze_00797 Corylus avellana HOM05D000660 ORTHO05D000766 1.3e-16 89.7 58 69.0
CiPaw.01G131100 Carya illinoinensis HOM05D000660 ORTHO05D000766 1.8e-16 89.4 54 75.9
CANSAT78G1470 Cannabis sativa HOM05D000660 ORTHO05D000766 3.0e-16 88.6 59 67.8
Gohir.A10G176100 Gossypium hirsutum HOM05D000660 ORTHO05D000766 3.0e-16 88.6 53 73.6
Gohir.D10G182700 Gossypium hirsutum HOM05D000660 ORTHO05D000766 3.0e-16 88.6 59 66.1
TAR636G1649 Trochodendron aralioides HOM05D000660 ORTHO05D000766 5.1e-16 87.8 59 67.8
ATR0796G020 Amborella trichopoda HOM05D000660 ORTHO05D000766 6.7e-16 87.4 61 67.2
Glyma.17G038800 Glycine max HOM05D000660 ORTHO05D000766 8.7e-16 87.0 92 50.0
Ciclev10004234m.g Citrus clementina HOM05D000660 ORTHO05D000766 1.1e-15 86.7 46 80.4
QL06p013787 Quercus lobata HOM05D000660 ORTHO05D000766 1.1e-15 86.7 84 52.4
Atru.chr4.3127 Acer truncatum HOM05D000660 ORTHO05D000766 1.9e-15 85.9 54 68.5
VMungo1215G2493 Vigna mungo HOM05D000660 ORTHO05D000766 5.6e-15 84.3 71 54.9
MBI02_g35301_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D022875 9.6e-15 83.6 63 60.3
MBI04_g14365_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D022875 9.6e-15 83.6 63 60.3
MBI19_g32711_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D000766 9.6e-15 83.6 63 60.3
Prupe.1G108700 Prunus persica HOM05D000660 ORTHO05D000766 9.6e-15 83.6 63 60.3
TPR.G12697 Trifolium pratense HOM05D000660 ORTHO05D000766 1.3e-14 83.2 52 69.2
PGSC0003DMG400014978 Solanum tuberosum HOM05D000660 ORTHO05D000766 2.1e-14 82.4 60 61.7
PSO210G1806 Papaver somniferum HOM05D000660 ORTHO05D000766 2.8e-14 82.0 75 53.3
PSO761G0346 Papaver somniferum HOM05D000660 ORTHO05D000766 2.8e-14 82.0 75 53.3
Eucgr.I02632 Eucalyptus grandis HOM05D000660 ORTHO05D000766 3.7e-14 81.6 59 59.3
RcHm_v2.0_Chr7g0219321 Rosa chinensis HOM05D000660 ORTHO05D000766 4.8e-14 81.3 70 52.9
Phvul.003G119800 Phaseolus vulgaris HOM05D000660 ORTHO05D000766 1.8e-13 79.3 67 56.7
TWI73G0654 Tripterygium wilfordii HOM05D000660 ORTHO05D000766 1.8e-13 79.3 61 60.7
MBI18_g28905_MAGBIO Magnolia biondii HOM05D000660 ORTHO05D000766 2.4e-13 79.0 63 60.3
FAN18G0042 Fragaria x ananassa HOM05D000660 ORTHO05D000766 2.0e-12 75.9 48 66.7
MD13G1144300 Malus domestica HOM05D000660 ORTHO05D000766 2.6e-12 75.5 45 73.3
MD16G1139100 Malus domestica HOM05D000660 ORTHO05D022875 2.6e-12 75.5 45 73.3
FvH4_5g27670 Fragaria vesca HOM05D000660 ORTHO05D000766 3.4e-12 75.1 45 71.1
FAN08G1179 Fragaria x ananassa HOM05D000660 ORTHO05D000766 3.4e-12 75.1 45 71.1
FAN13G0923 Fragaria x ananassa HOM05D000660 ORTHO05D000766 3.4e-12 75.1 45 71.1
FAN04G0159 Fragaria x ananassa HOM05D000660 ORTHO05D000766 1.0e-11 73.6 45 68.9
Lalb_Chr12g0200691 Lupinus albus HOM05D000660 ORTHO05D000766 1.0e-11 73.6 96 38.5
ClCG04G007430 Citrullus lanatus HOM05D000660 ORTHO05D000766 1.3e-11 73.2 58 58.6
MELO3C003208.2 Cucumis melo HOM05D000660 ORTHO05D000766 3.8e-11 71.6 57 57.9
CsaV3_4G025820 Cucumis sativus L. HOM05D000660 ORTHO05D000766 6.5e-11 70.9 57 57.9
Sed0000873 Sechium edule HOM05D000660 ORTHO05D000766 6.5e-11 70.9 66 50.0
Nitab4.5_0000992g0020 Nicotiana tabacum HOM05D000660 ORTHO05D000766 1.1e-10 70.1 59 59.3
Solyc01g057270.4 Solanum lycopersicum HOM05D000660 ORTHO05D000766 7.1e-10 67.4 60 55.0
Lsat_1_v5_gn_1_40580 Lactuca sativa HOM05D000660 ORTHO05D000766 6.0e-09 64.3 50 60.0
SEGI_25746 Sequoiadendron giganteum HOM05D000660 ORTHO05D000766 1.0e-08 63.5 51 56.9
SEGI_31550 Sequoiadendron giganteum HOM05D000660 ORTHO05D000766 1.0e-08 63.5 51 56.9
COL.COLO4_31767 Corchorus olitorius HOM05D000660 ORTHO05D000766 1.8e-08 62.8 82 39.0
vmacro07996 Vaccinium macrocarpon HOM05D000660 ORTHO05D000766 2.5e-07 58.9 42 66.7
CDE11G0747 Ceratophyllum demersum HOM05D000660 ORTHO05D000766 6.2e-06 54.3 85 41.2


User provided reference genes

Program Settings