Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.5e-214 749.2 365 100.0
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.9e-206 722.2 363 96.7
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 8.3e-149 530.8 374 69.5
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 6.2e-144 514.6 385 67.3
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 3.4e-142 508.8 378 68.8
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.9e-141 505.8 369 66.4
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 6.4e-141 504.6 337 73.0
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 8.3e-141 504.2 382 66.8
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 4.1e-140 501.9 375 65.9
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 7.1e-140 501.1 370 66.5
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.9e-138 495.4 367 65.7
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.9e-137 493.0 385 62.9
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 2.5e-137 492.7 369 64.5
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 3.3e-137 492.3 371 66.6
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 3.6e-136 488.8 368 67.1
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 4.0e-135 485.3 363 66.4
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 9.9e-134 480.7 382 62.8
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 6.4e-133 478.0 370 65.9
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 7.1e-132 474.6 358 64.0
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 9.2e-132 474.2 358 64.0
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.1e-131 473.0 375 63.2
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 1.7e-130 469.9 399 61.9
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 2.3e-130 469.5 369 63.4
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 2.3e-130 469.5 322 68.9
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 3.9e-130 468.8 364 64.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.9e-130 468.8 385 61.6
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 6.6e-130 468.0 356 66.0
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 6.6e-130 468.0 346 64.5
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 6.6e-130 468.0 377 63.4
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 6.6e-130 468.0 368 61.1
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 8.6e-130 467.6 359 66.3
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.1e-129 467.2 339 66.7
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 4.3e-129 465.3 363 62.3
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 5.6e-129 464.9 366 64.2
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 7.3e-129 464.5 355 65.9
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.6e-128 463.4 435 56.6
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.8e-128 462.6 321 68.5
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.6e-128 462.2 366 63.4
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.6e-128 462.2 366 63.4
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 4.7e-128 461.8 346 67.1
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.7e-128 461.8 377 62.9
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 8.1e-128 461.1 373 62.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.4e-127 460.3 360 63.6
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.4e-127 460.3 362 60.8
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.4e-127 459.5 362 61.6
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 4.0e-127 458.8 373 62.7
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 8.9e-127 457.6 322 68.3
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 1.2e-126 457.2 375 60.8
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 1.5e-126 456.8 372 62.9
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 2.6e-126 456.1 363 62.8
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 4.4e-126 455.3 369 62.9
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 4.4e-126 455.3 332 64.2
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.4e-126 455.3 381 61.7
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 5.8e-126 454.9 360 62.2
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 7.6e-126 454.5 372 62.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 9.9e-126 454.1 374 60.4
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 9.9e-126 454.1 372 62.4
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 1.3e-125 453.8 342 66.1
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.8e-125 452.2 391 61.6
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.8e-125 452.2 358 62.0
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.4e-125 451.4 349 63.0
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 8.4e-125 451.1 364 61.0
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.4e-124 450.3 326 64.7
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.9e-124 449.9 317 64.7
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.4e-124 449.5 363 61.4
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.1e-124 448.0 365 59.7
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 7.1e-124 448.0 358 61.5
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.2e-123 447.2 365 61.6
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 6.0e-123 444.9 399 57.9
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 8.7e-122 441.0 356 63.8
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 7.3e-121 438.0 371 60.1
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 9.6e-121 437.6 328 61.9
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.1e-120 436.4 351 61.5
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 2.1e-120 436.4 357 61.9
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 4.8e-120 435.3 348 60.9
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 8.1e-120 434.5 338 62.4
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 8.1e-120 434.5 385 58.4
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 8.1e-120 434.5 340 60.3
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 1.1e-119 434.1 339 61.4
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.1e-119 432.6 313 64.9
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 2.6e-118 429.5 373 59.2
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 2.6e-118 429.5 350 62.6
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 4.4e-118 428.7 295 69.2
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 9.9e-118 427.6 327 63.3
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.2e-117 426.4 360 58.9
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 3.8e-117 425.6 363 59.8
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.9e-117 425.2 329 63.5
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.1e-116 424.1 350 60.6
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 3.5e-115 419.1 354 61.9
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.1e-114 415.2 278 70.9
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 4.3e-113 412.1 314 64.3
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 9.6e-113 411.0 378 56.9
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 3.6e-112 409.1 278 68.7
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 3.1e-111 406.0 278 66.5
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.5e-110 403.7 327 58.7
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 1.5e-110 403.7 273 70.7
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 7.6e-110 401.4 368 57.9
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 9.9e-110 401.0 355 58.9
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 4.6e-107 392.1 375 55.5
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 8.7e-106 387.9 303 62.7
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 4.3e-105 385.6 322 59.9
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 4.0e-103 379.0 370 54.1
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.0e-98 364.4 321 57.6
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.9e-97 360.1 351 53.0
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 2.1e-96 356.7 396 51.5
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 3.7e-96 355.9 329 56.5
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 1.2e-94 350.9 305 55.4
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 7.9e-91 338.2 319 56.7
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 5.9e-86 322.0 344 50.9
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 5.9e-86 322.0 296 53.0
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 5.0e-77 292.4 295 49.5
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 6.5e-77 292.0 272 58.1
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 3.8e-69 266.2 207 60.9
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 3.8e-69 266.2 244 54.1
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.4e-66 257.7 296 43.2
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 9.7e-65 251.5 287 45.3
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 4.8e-64 249.2 286 42.0
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 8.2e-64 248.4 284 51.1
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 2.4e-55 220.3 294 41.8
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 3.5e-46 189.9 127 68.5
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 4.7e-35 152.9 148 50.0
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 3.4e-33 146.7 89 73.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 4.1e-31 139.8 83 73.5
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 3.6e-27 126.7 213 36.2
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.9e-23 114.4 70 68.6
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.6e-11 74.7 71 47.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 7.6e-09 65.9 42 64.3
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.9e-08 63.9 75 45.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.4e-07 60.8 48 52.1


User provided reference genes

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