Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.5e-231 805.1 393 100.0
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.0e-205 719.9 363 96.7
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 8.4e-147 524.2 376 68.9
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.6e-142 510.0 386 66.8
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 1.4e-141 506.9 383 66.6
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 4.0e-141 505.4 339 72.9
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 2.0e-140 503.1 380 68.4
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 5.4e-138 495.0 371 65.5
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 2.7e-137 492.7 373 66.2
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 2.3e-136 489.6 370 67.3
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.5e-135 486.1 371 64.7
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 2.5e-135 486.1 386 64.5
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 5.6e-135 485.0 388 63.7
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 9.6e-135 484.2 390 62.3
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.3e-134 483.8 378 63.0
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 2.4e-133 479.6 372 66.1
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 4.0e-133 478.8 365 66.0
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 1.1e-130 470.7 358 66.2
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 3.2e-130 469.2 384 62.0
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 2.1e-129 466.5 360 63.3
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 2.1e-129 466.5 401 61.8
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.7e-129 466.1 360 63.3
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.5e-129 465.7 388 61.3
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 4.6e-129 465.3 324 68.5
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 4.6e-129 465.3 351 65.8
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 7.9e-129 464.5 366 64.5
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 1.0e-128 464.2 373 62.2
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.3e-128 463.8 341 66.3
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 5.1e-128 461.8 348 67.0
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 8.7e-128 461.1 377 63.1
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.7e-128 461.1 356 63.8
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.7e-128 461.1 356 63.8
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 8.7e-128 461.1 324 68.2
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.1e-127 460.7 373 61.9
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.5e-127 460.3 368 64.1
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.5e-127 460.3 367 62.4
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.5e-127 460.3 379 63.1
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 4.3e-127 458.8 377 63.1
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 7.4e-127 458.0 385 59.7
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 9.6e-127 457.6 375 61.9
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.3e-126 457.2 437 56.1
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 1.6e-126 456.8 389 62.2
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.8e-126 456.1 348 63.2
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 2.8e-126 456.1 357 65.3
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 4.8e-126 455.3 374 62.8
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 6.2e-126 454.9 325 67.7
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 8.1e-126 454.5 374 62.6
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.1e-125 454.1 364 60.4
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.4e-125 453.8 365 62.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 2.4e-125 453.0 372 62.1
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 5.3e-125 451.8 334 63.8
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.3e-125 451.8 383 61.6
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 5.3e-125 451.8 374 62.0
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 9.0e-125 451.1 364 61.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 9.0e-125 451.1 344 65.7
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 2.6e-124 449.5 393 61.3
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.6e-124 449.5 338 63.6
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.5e-124 448.7 367 61.9
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.0e-123 447.6 351 63.5
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.9e-123 446.0 372 61.3
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 4.9e-123 445.3 367 61.6
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 6.5e-123 444.9 319 63.9
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 6.5e-123 444.9 325 64.3
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 6.5e-123 444.9 346 63.9
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.1e-122 444.1 366 60.4
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.4e-122 443.7 362 60.8
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 3.5e-121 439.1 401 57.6
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 7.9e-121 438.0 356 63.5
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 6.7e-120 434.9 387 58.7
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 8.7e-120 434.5 342 60.2
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.5e-119 433.7 365 60.0
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 1.9e-119 433.3 329 64.1
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.9e-119 433.3 373 59.5
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 2.5e-119 433.0 367 58.0
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 5.7e-119 431.8 350 60.3
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 2.8e-118 429.5 348 59.5
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 8.2e-118 427.9 319 63.3
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.4e-117 427.2 360 61.7
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 1.4e-117 427.2 341 60.7
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.4e-117 426.4 353 60.3
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 2.4e-117 426.4 352 62.2
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 2.4e-117 426.4 303 67.0
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.2e-116 424.1 338 61.2
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 2.0e-116 423.3 375 58.1
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.2e-115 419.9 362 58.3
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 6.5e-115 418.3 365 58.6
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 8.5e-115 417.9 329 63.5
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.1e-114 417.5 350 59.7
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 2.7e-113 412.9 354 60.7
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 7.9e-113 411.4 280 70.0
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 1.1e-111 407.5 314 63.7
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.3e-111 406.0 380 56.8
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 7.4e-111 404.8 273 70.7
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 9.7e-111 404.4 280 66.8
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 5.3e-109 398.7 280 67.5
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.0e-108 396.7 370 57.0
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 5.9e-108 395.2 330 57.3
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.0e-107 394.4 359 57.4
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 3.6e-105 386.0 377 54.4
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 2.0e-103 380.2 324 59.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 2.0e-103 380.2 303 62.4
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 9.7e-103 377.9 372 54.0
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 5.5e-98 362.1 324 57.4
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.0e-95 353.6 353 52.4
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 2.6e-95 353.2 292 59.9
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 5.7e-95 352.1 397 50.9
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 9.1e-93 344.7 308 54.2
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.1e-90 337.8 322 56.8
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 4.1e-85 319.3 352 50.3
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 2.7e-84 316.6 294 52.4
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 7.0e-77 292.0 272 58.1
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 2.9e-75 286.6 297 49.5
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 3.8e-67 259.6 244 52.9
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 6.6e-67 258.8 207 59.4
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.0e-63 247.3 296 41.9
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 2.2e-62 243.8 284 50.4
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.2e-62 243.8 286 41.6
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 8.3e-62 241.9 286 44.1
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.7e-54 217.6 296 41.2
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 5.8e-47 192.6 129 69.0
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 8.7e-35 152.1 146 50.0
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 9.6e-34 148.7 89 74.2
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 9.0e-32 142.1 85 74.1
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.4e-24 117.5 199 35.2
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 8.4e-22 109.0 70 64.3
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.3e-11 74.3 71 47.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 6.2e-09 66.2 42 64.3
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.6e-07 60.8 75 45.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 4.5e-07 60.1 79 41.8


User provided reference genes

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