Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 0.0e+00 1411.0 708 100.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 4.2e-274 948.0 702 68.8
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 2.1e-257 892.5 713 65.6
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.0e-255 885.9 618 71.7
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 7.0e-253 877.5 699 66.4
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.6e-252 876.3 704 64.2
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 3.5e-252 875.2 713 64.5
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 8.6e-251 870.5 662 68.0
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.6e-244 849.7 716 62.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 4.7e-241 838.2 707 62.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 2.3e-240 835.9 704 61.8
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 4.4e-239 831.6 788 57.2
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.4e-237 826.6 666 64.1
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 2.3e-235 819.3 678 62.8
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 5.2e-232 808.1 668 62.3
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 2.0e-231 806.2 715 58.3
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 9.9e-231 803.9 667 62.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.7e-230 803.1 710 59.4
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.1e-229 800.4 710 59.9
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 2.4e-229 799.3 711 60.1
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.2e-229 797.3 710 59.7
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.0e-227 793.9 710 60.0
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.0e-227 793.9 668 61.7
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.0e-227 793.9 670 61.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 3.0e-227 792.3 671 60.5
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 8.6e-227 790.8 612 66.2
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 8.6e-227 790.8 656 62.3
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 8.6e-227 790.8 665 60.0
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.5e-226 789.3 647 63.4
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.3e-226 788.5 710 59.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 5.8e-223 778.1 734 57.5
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.8e-223 778.1 714 58.5
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 7.6e-223 777.7 723 57.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.3e-222 776.9 650 61.5
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.4e-221 773.5 710 57.3
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.0e-220 768.1 713 57.1
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 7.8e-220 767.7 712 57.9
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.3e-219 766.9 668 60.2
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.3e-219 766.1 638 60.7
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.5e-218 762.7 715 57.8
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 5.6e-218 761.5 654 59.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 4.8e-217 758.4 716 58.0
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 8.1e-217 757.7 686 57.9
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 2.4e-216 756.1 660 59.5
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 6.9e-216 754.6 714 56.7
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.2e-215 753.8 716 56.1
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 4.9e-214 748.4 715 56.6
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.9e-213 746.5 715 56.4
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 2.3e-211 739.6 711 56.4
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 5.1e-211 738.4 618 64.1
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 5.1e-211 738.4 644 58.7
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 3.6e-209 732.3 663 58.7
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.8e-201 706.1 663 56.1
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 8.1e-201 704.5 711 55.3
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 9.0e-200 701.0 697 55.5
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.5e-199 700.3 711 54.9
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.4e-199 699.1 700 57.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 8.4e-198 694.5 712 54.9
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 8.4e-198 694.5 638 58.8
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 2.5e-197 693.0 748 51.7
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.2e-197 692.6 729 52.1
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 4.2e-197 692.2 699 54.8
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 9.3e-197 691.0 714 53.9
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.2e-196 690.6 698 54.7
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.2e-196 690.6 698 54.7
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 6.0e-196 688.3 640 56.9
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-195 687.2 625 58.6
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.3e-195 686.4 699 54.4
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 2.5e-194 682.9 637 58.4
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 3.3e-194 682.6 699 54.5
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.3e-194 682.6 676 54.4
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.3e-190 670.6 721 52.6
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.5e-189 666.4 678 55.8
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 5.7e-186 655.2 500 63.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.4e-183 646.0 681 51.5
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.9e-181 640.2 612 58.3
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.5e-181 638.6 476 68.3
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.5e-181 638.6 723 50.6
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.7e-179 631.7 681 51.0
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 9.1e-176 621.3 488 65.6
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.7e-174 617.1 612 56.9
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 5.0e-174 615.5 533 61.4
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 2.7e-172 609.8 691 52.2
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.0e-171 607.8 712 49.9
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 6.7e-171 605.1 687 48.0
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 7.0e-168 595.1 666 48.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.0e-155 554.7 530 54.3
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.4e-155 554.3 506 59.1
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.4e-155 554.3 493 58.6
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 8.0e-148 528.5 358 72.1
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 4.0e-147 526.2 379 68.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 3.3e-141 506.5 310 79.4
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.5e-125 454.5 649 42.1
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 5.2e-123 446.0 311 69.8
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.0e-122 444.1 412 60.4
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.1e-107 395.2 339 60.2
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.1e-107 393.7 306 64.1
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 4.6e-103 379.8 337 58.5
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 6.6e-102 375.9 661 36.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 2.2e-97 360.9 375 52.0
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.2e-96 356.7 378 51.3
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.9e-93 347.8 706 34.3
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 4.0e-91 340.1 402 49.0
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.1e-87 327.8 615 37.1
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 6.2e-84 316.2 328 52.7
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.1e-83 315.5 319 57.4
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 4.8e-76 290.0 652 32.4
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 1.1e-67 262.3 558 32.6
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 9.1e-59 232.6 328 42.4
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 4.1e-51 207.2 156 62.2
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.7e-49 201.8 122 74.6
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.0e-49 200.3 261 44.4
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.4e-43 181.4 212 44.8
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 8.5e-41 172.9 132 59.8
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 9.8e-37 159.5 120 60.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 9.1e-35 152.9 239 39.7
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.1e-32 146.0 144 47.2
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.2e-32 143.3 188 43.6
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.4e-27 129.0 173 45.7
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 7.0e-27 126.7 167 47.9
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 6.1e-23 113.6 298 32.6
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.9e-20 104.8 117 49.6
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.1e-19 100.9 165 37.0
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.0e-18 98.6 77 62.3
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.0e-17 94.0 78 56.4
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 9.8e-13 79.7 325 24.0
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.9e-12 78.2 210 28.6
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 3.5e-10 71.2 217 25.8
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.3e-09 69.3 72 47.2
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 6.6e-09 67.0 136 33.1
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 3.3e-08 64.7 153 30.7


User provided reference genes

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