Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 4.3e-190 667.9 359 100.0
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 2.0e-142 509.6 345 80.9
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 4.1e-140 501.9 367 77.9
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 4.1e-140 501.9 365 76.2
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 2.6e-139 499.2 359 78.0
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 3.4e-139 498.8 328 84.1
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 4.5e-139 498.4 366 76.8
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 7.7e-139 497.7 363 75.8
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 5.0e-138 495.0 368 77.2
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 8.5e-138 494.2 359 75.8
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 2.3e-135 486.1 364 75.3
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 2.0e-134 483.0 338 78.4
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 5.7e-134 481.5 333 80.2
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 9.7e-134 480.7 336 78.3
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 1.7e-133 479.9 340 77.9
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 2.2e-133 479.6 386 70.7
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 3.7e-133 478.8 364 76.1
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 4.8e-133 478.4 365 74.8
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 6.3e-133 478.0 364 75.8
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 1.4e-132 476.9 340 79.1
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 1.4e-132 476.9 386 70.2
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 2.4e-132 476.1 371 73.9
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 4.1e-132 475.3 364 75.5
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 4.1e-132 475.3 364 73.9
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 7.0e-132 474.6 368 74.7
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 2.0e-131 473.0 359 73.3
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 3.5e-131 472.2 363 74.9
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 4.5e-131 471.9 356 75.0
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 7.7e-131 471.1 364 72.0
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 1.3e-130 470.3 330 77.9
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 5.0e-130 468.4 336 78.9
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 5.0e-130 468.4 327 79.5
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 8.5e-130 467.6 364 74.7
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 3.2e-129 465.7 263 93.2
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 7.2e-129 464.5 363 72.7
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 1.6e-128 463.4 361 72.6
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 3.3e-126 455.7 267 89.9
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 4.4e-126 455.3 350 73.4
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 3.7e-125 452.2 314 79.0
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 8.2e-125 451.1 358 71.8
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 1.1e-124 450.7 350 72.6
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 1.4e-124 450.3 347 73.8
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 1.8e-124 449.9 345 75.7
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 2.4e-124 449.5 266 89.1
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 7.0e-124 448.0 370 71.6
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 9.1e-124 447.6 323 74.6
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 1.2e-123 447.2 341 73.3
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 1.6e-123 446.8 344 75.9
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 3.5e-123 445.7 386 68.9
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 3.5e-123 445.7 266 88.7
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 4.5e-123 445.3 331 76.7
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 4.5e-123 445.3 318 76.4
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 5.9e-123 444.9 363 72.5
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 7.7e-123 444.5 340 72.6
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 1.0e-122 444.1 340 73.8
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.0e-122 444.1 316 75.9
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 1.0e-122 444.1 299 82.3
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 1.3e-122 443.7 345 74.5
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 1.3e-122 443.7 340 72.1
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.3e-122 443.7 317 76.0
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 1.7e-122 443.4 318 76.7
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 2.2e-122 443.0 315 79.4
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 2.2e-122 443.0 317 78.9
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 3.8e-122 442.2 362 71.3
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 5.0e-122 441.8 363 71.9
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 5.0e-122 441.8 345 75.1
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 5.0e-122 441.8 318 76.1
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 6.5e-122 441.4 365 70.7
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 8.5e-122 441.0 364 71.2
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 3.2e-121 439.1 360 70.3
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 9.4e-121 437.6 295 80.3
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 1.2e-120 437.2 310 78.1
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 1.6e-120 436.8 341 72.7
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 6.1e-120 434.9 338 73.4
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 3.0e-119 432.6 257 87.9
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 4.0e-119 432.2 295 79.3
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 5.2e-119 431.8 328 76.2
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 1.2e-118 430.6 322 74.2
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 1.5e-118 430.3 358 67.6
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 7.5e-118 427.9 337 71.5
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 9.7e-118 427.6 296 78.4
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 1.3e-117 427.2 389 65.3
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 1.4e-116 423.7 362 67.7
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 4.1e-116 422.2 307 76.2
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 4.7e-112 408.7 316 73.1
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 1.8e-111 406.8 292 76.4
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 1.8e-111 406.8 326 69.9
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 5.2e-111 405.2 352 67.6
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 6.8e-111 404.8 312 74.4
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 4.1e-108 395.6 316 71.5
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 9.1e-108 394.4 319 71.8
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 1.6e-107 393.7 270 78.9
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 1.1e-105 387.5 321 68.5
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 8.0e-104 381.3 271 74.9
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 1.5e-102 377.1 260 78.1
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 5.7e-102 375.2 370 62.7
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 7.5e-102 374.8 299 72.6
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 2.8e-101 372.9 313 70.0
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 3.1e-100 369.4 380 61.8
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 2.3e-98 363.2 255 75.7
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 8.6e-98 361.3 226 85.0
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 6.1e-96 355.1 255 73.7
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 8.9e-95 351.3 365 61.1
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 1.9e-92 343.6 195 92.3
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 2.0e-86 323.6 291 64.6
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 9.8e-86 321.2 240 74.6
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 1.9e-84 317.0 195 87.2
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 3.0e-82 309.7 260 63.8
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 2.9e-77 293.1 310 60.3
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 7.8e-75 285.0 246 67.5
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 2.6e-70 270.0 245 59.6
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 1.9e-68 263.8 245 59.2
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 1.8e-63 247.3 230 64.8
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 4.0e-63 246.1 293 54.6
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 1.7e-61 240.7 276 52.5
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 3.0e-58 229.9 230 62.6
Os12g0137300 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 3.9e-58 229.6 176 76.1
BcaC01g06300 Brassica carinata HOM05D005990 ORTHO05D007908 1.3e-48 198.0 135 80.7
SEGI_00968 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 4.8e-48 196.1 135 79.3
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 8.7e-42 175.3 98 94.9
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 2.6e-38 163.7 115 80.0
MD03G1219200 Malus domestica HOM05D005990 ORTHO05D007908 1.7e-37 161.0 204 55.9
SEGI_31484 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 5.5e-36 156.0 93 88.2
CSS0033016 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 1.1e-33 148.3 159 57.2
CSS0043364 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 3.3e-33 146.7 159 56.6
HPP92_027973 Vanilla planifolia HOM05D005990 ORTHO05D007908 4.1e-31 139.8 148 59.5
HPP92_027972 Vanilla planifolia HOM05D005990 ORTHO05D007908 1.6e-19 101.3 80 67.5
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 7.4e-17 92.4 96 55.2
Solyc05g150137.1 Solanum lycopersicum HOM05D005990 ORTHO05D391672 2.0e-14 84.3 59 69.5
HanXRQChr12g0381681 Helianthus annuus HOM05D005990 ORTHO05D221923 1.5e-12 78.2 225 32.4
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 6.7e-10 69.3 46 73.9
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.5e-06 56.6 29 100.0
MBI07_g21055_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022192 5.9e-06 56.2 41 73.2


User provided reference genes

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