Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.5e-191 671.4 326 100.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 8.2e-156 553.9 298 89.6
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 3.1e-155 552.0 296 89.2
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.0e-154 549.3 303 87.8
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.1e-152 543.5 296 88.5
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.2e-151 540.0 303 86.5
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.1e-151 539.3 298 86.6
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 3.6e-151 538.5 303 86.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 7.9e-151 537.3 287 89.5
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.3e-150 535.8 292 87.0
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 5.1e-150 534.6 296 86.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 6.7e-150 534.3 298 85.2
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.1e-149 533.5 292 86.3
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.0e-149 532.7 295 87.5
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.6e-149 532.3 303 85.5
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 3.3e-149 531.9 294 86.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 3.3e-149 531.9 300 85.7
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 3.3e-149 531.9 300 86.3
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 4.4e-149 531.6 298 84.6
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 9.7e-149 530.4 284 89.1
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.2e-148 529.3 303 85.1
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 4.8e-148 528.1 300 85.7
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.1e-147 526.9 297 83.8
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.4e-147 526.6 290 86.2
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.1e-147 525.4 290 85.9
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.1e-147 525.4 300 85.3
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.6e-146 522.3 293 84.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.6e-146 522.3 293 84.0
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.6e-146 522.3 290 85.5
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.6e-146 522.3 303 85.1
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.4e-146 521.9 303 82.8
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 5.9e-146 521.2 295 83.1
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.7e-146 520.8 293 83.6
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.0e-145 520.4 292 86.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.0e-145 520.4 325 81.2
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.3e-145 520.0 290 85.2
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.7e-145 519.6 293 83.3
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.2e-145 519.2 293 83.3
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 5.0e-145 518.1 289 84.4
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 5.0e-145 518.1 291 83.5
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 6.5e-145 517.7 293 84.3
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.1e-144 516.9 308 81.2
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.4e-144 516.5 284 84.9
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 3.2e-144 515.4 291 82.8
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 5.5e-144 514.6 304 84.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 9.4e-144 513.8 295 83.1
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.6e-143 513.1 308 80.5
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.0e-142 510.4 295 82.0
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 3.9e-142 508.4 295 82.7
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 8.8e-142 507.3 290 82.1
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.0e-141 506.1 295 82.4
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 4.4e-141 505.0 296 82.1
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.8e-140 502.3 279 86.7
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.7e-140 501.9 310 78.7
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 6.3e-140 501.1 290 82.8
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.5e-138 495.4 294 81.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.0e-137 493.8 294 77.9
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.3e-137 493.4 286 80.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.3e-137 493.4 293 78.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 5.0e-137 491.5 346 70.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 6.5e-137 491.1 294 78.2
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.1e-136 490.3 286 81.1
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.5e-136 490.0 294 77.9
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.2e-136 488.8 286 80.4
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 4.2e-136 488.4 292 79.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.2e-136 487.6 295 80.0
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.6e-135 486.5 289 78.9
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 2.1e-135 486.1 291 79.4
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 2.7e-135 485.7 289 78.5
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 6.1e-135 484.6 286 80.4
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 6.1e-135 484.6 291 79.0
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.0e-134 483.8 291 80.8
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.0e-134 483.8 289 78.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.4e-134 483.4 299 76.3
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.3e-134 482.6 291 78.7
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.3e-134 482.6 291 78.7
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 5.2e-134 481.5 264 86.7
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 6.7e-134 481.1 294 76.2
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 8.8e-134 480.7 293 77.1
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.2e-133 480.3 293 77.8
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 5.7e-133 478.0 296 75.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 9.7e-133 477.2 286 79.0
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.3e-132 476.9 325 74.5
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.6e-130 469.9 291 74.9
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.5e-130 468.8 316 72.5
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 9.4e-128 460.7 290 74.1
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-127 460.3 286 76.6
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.6e-125 452.6 297 72.7
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.2e-124 449.5 286 73.4
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 8.3e-124 447.6 289 77.9
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 1.0e-121 440.7 257 79.0
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.3e-121 439.5 299 72.9
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 2.3e-113 412.9 293 68.6
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 4.6e-106 388.7 221 83.7
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 8.0e-103 377.9 296 60.5
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 4.1e-99 365.5 282 61.7
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 2.7e-98 362.8 206 85.9
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.7e-97 360.1 293 62.5
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 4.4e-93 345.5 286 60.5
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.3e-92 344.0 190 82.6
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.5e-85 320.5 199 75.9
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 5.1e-81 305.4 184 78.3
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-72 277.7 167 82.0
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 5.6e-72 275.4 258 53.9
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 2.9e-68 263.1 151 81.5
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.2e-66 257.7 145 82.8
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.1e-55 220.3 148 73.0
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-54 218.0 142 78.9
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 3.1e-46 189.9 114 81.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 6.5e-44 182.2 105 83.8
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 3.0e-33 146.7 81 87.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-31 140.6 77 89.6
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 5.5e-27 125.9 73 80.8
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 5.5e-27 125.9 113 59.3
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.9e-25 119.8 61 91.8
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.8e-23 113.6 329 25.5
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 3.1e-22 110.2 308 26.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 4.1e-22 109.8 324 26.9
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 5.0e-12 76.3 41 87.8


User provided reference genes

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