Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 5.1e-284 980.3 473 100.0
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 6.6e-231 803.9 480 79.8
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 1.7e-223 779.2 476 78.6
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 6.4e-218 760.8 483 76.2
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 1.3e-215 753.1 483 74.9
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 2.3e-215 752.3 462 77.1
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 8.6e-215 750.4 467 77.9
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 1.9e-214 749.2 462 77.7
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 2.1e-213 745.7 475 75.4
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 6.2e-213 744.2 468 76.3
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 1.4e-212 743.0 468 76.1
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 6.9e-212 740.7 460 75.4
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 1.7e-210 736.1 473 74.6
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.2e-210 735.7 479 74.7
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 6.4e-210 734.2 473 74.4
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 1.1e-209 733.4 478 74.5
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 1.7e-207 726.1 466 74.5
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 8.7e-207 723.8 475 73.1
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.6e-205 719.5 476 72.3
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.6e-205 719.5 468 74.4
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 2.8e-205 718.8 471 74.5
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 4.8e-205 718.0 445 77.3
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 1.1e-204 716.8 484 70.7
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 5.3e-204 714.5 482 71.6
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 9.0e-204 713.8 469 72.3
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.6e-203 712.2 495 71.1
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 7.6e-203 710.7 480 71.7
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 8.4e-202 707.2 470 72.8
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 2.4e-201 705.7 470 72.6
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 2.4e-201 705.7 470 71.1
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 2.4e-201 705.7 480 71.2
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 2.4e-201 705.7 454 73.6
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 7.1e-201 704.1 471 71.5
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 9.3e-201 703.7 468 72.6
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 9.3e-201 703.7 395 82.0
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 9.3e-201 703.7 466 70.8
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.1e-200 702.6 467 71.5
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 7.9e-200 700.7 469 70.4
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 1.3e-199 699.9 466 70.4
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 1.8e-199 699.5 469 71.4
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 2.5e-198 695.7 467 70.9
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 4.3e-198 694.9 395 81.5
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 9.6e-198 693.7 479 71.2
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.3e-197 693.3 466 69.3
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 1.6e-197 693.0 467 71.7
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 4.8e-197 691.4 474 70.9
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.8e-196 689.5 478 71.1
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 3.1e-196 688.7 472 71.4
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 9.0e-196 687.2 474 70.5
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 1.5e-195 686.4 473 70.8
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 3.4e-195 685.3 474 70.7
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.7e-194 682.9 457 71.6
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 3.2e-193 678.7 478 67.8
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 4.2e-193 678.3 478 71.1
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 4.2e-193 678.3 473 69.6
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 9.3e-193 677.2 475 69.9
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 1.6e-192 676.4 447 70.9
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 2.1e-192 676.0 479 67.4
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 2.1e-192 676.0 495 67.9
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 2.7e-192 675.6 467 69.2
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 2.7e-192 675.6 471 70.1
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 1.3e-191 673.3 467 69.4
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 3.9e-191 671.8 468 69.9
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.5e-190 669.8 431 73.1
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 5.6e-190 667.9 466 69.5
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 7.4e-190 667.5 406 76.6
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 1.6e-189 666.4 468 69.4
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 1.6e-189 666.4 468 69.4
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 4.8e-189 664.8 474 66.2
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.4e-188 663.3 468 68.6
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 1.4e-188 663.3 449 70.8
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 2.4e-188 662.5 466 68.9
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.4e-188 662.5 410 74.6
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 1.5e-187 659.8 461 69.6
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 3.4e-187 658.7 475 67.2
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 7.6e-187 657.5 465 68.8
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 2.2e-186 656.0 454 68.9
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.8e-186 655.2 462 67.7
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 8.4e-186 654.1 462 67.5
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 1.1e-185 653.7 454 68.9
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 2.5e-185 652.5 464 68.1
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.5e-185 651.4 485 65.2
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 7.9e-184 647.5 482 67.8
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 6.7e-183 644.4 479 69.3
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 2.5e-182 642.5 461 68.1
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 1.2e-179 633.6 392 75.3
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.2e-178 629.4 398 72.1
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 5.5e-177 624.8 426 71.8
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 2.7e-176 622.5 417 72.9
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.3e-175 620.2 471 64.8
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 1.9e-174 616.3 434 70.0
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 2.2e-173 612.8 472 61.2
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 4.8e-173 611.7 354 80.2
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 6.9e-172 607.8 356 79.2
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 2.6e-171 605.9 385 71.2
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 7.7e-171 604.4 463 63.3
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 6.5e-170 601.3 483 65.6
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 8.8e-167 590.9 403 68.7
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 8.8e-167 590.9 460 62.4
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 4.5e-163 578.6 363 77.7
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 2.2e-162 576.2 355 75.5
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 5.7e-158 561.6 394 70.6
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 4.8e-157 558.5 388 69.6
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 7.0e-156 554.7 352 69.9
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.3e-154 550.4 394 66.8
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.3e-138 496.5 441 58.3
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.6e-131 473.8 319 75.2
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 2.9e-125 453.0 410 54.6
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.1e-124 451.1 410 52.7
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 3.9e-122 442.6 394 53.3
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.1e-121 441.0 403 52.4
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 5.6e-121 438.7 259 80.7
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.9e-109 399.8 434 46.5
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 2.1e-104 383.6 296 66.2
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 8.7e-90 335.1 242 63.2
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 7.6e-78 295.4 184 67.9
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 3.9e-74 283.1 230 64.8
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 6.7e-74 282.3 174 77.0
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 1.4e-71 274.6 159 76.7
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 4.9e-69 266.2 252 53.2
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 3.3e-65 253.4 157 73.2
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 1.3e-53 214.9 128 73.4
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 7.2e-44 182.6 118 68.6
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 1.7e-32 144.8 384 28.9
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 2.7e-30 137.5 86 77.9
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 8.5e-29 132.5 377 29.7
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 1.8e-23 114.8 411 28.0
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 4.1e-23 113.6 476 25.6
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 3.5e-14 84.0 55 76.4
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 2.3e-13 81.3 80 60.0
Os07g0660400 Oryza sativa ssp. japonica HOM05D005787 ORTHO05D007011 2.5e-12 77.8 108 38.0
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 5.2e-10 70.1 91 40.7
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 8.9e-10 69.3 55 54.5
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 2.6e-09 67.8 166 31.9
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 5.8e-09 66.6 61 54.1
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 5.8e-09 66.6 61 54.1


User provided reference genes

Program Settings