Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 3.5e-139 499.6 243 100.0
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.4e-82 311.6 195 74.9
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.2e-80 304.3 213 71.4
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.2e-78 298.5 175 80.6
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.0e-78 297.7 206 69.4
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 2.7e-78 297.4 202 69.3
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 3.8e-77 293.5 192 71.9
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 6.5e-77 292.7 194 72.7
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.5e-76 291.6 170 80.0
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 1.9e-76 291.2 191 71.7
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 5.5e-76 289.7 191 71.2
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 1.2e-75 288.5 194 70.6
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 8.0e-75 285.8 194 68.6
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.8e-74 284.6 193 72.5
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.2e-74 283.1 208 65.9
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 5.2e-74 283.1 192 69.3
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.5e-73 281.6 244 60.2
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.4e-73 280.4 194 68.6
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 5.7e-73 279.6 208 65.9
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 7.5e-73 279.3 194 69.1
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.3e-72 278.5 196 66.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 2.8e-72 277.3 192 68.8
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 6.3e-72 276.2 193 68.4
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 8.3e-72 275.8 192 67.2
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 1.1e-71 275.4 191 67.5
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-71 275.4 202 66.3
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.1e-71 275.4 234 59.4
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.4e-71 275.0 194 67.0
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 3.1e-71 273.9 172 75.6
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 3.1e-71 273.9 192 66.1
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 5.4e-71 273.1 219 63.0
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 7.0e-71 272.7 195 66.7
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 4.5e-70 270.0 208 64.4
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.0e-69 268.9 187 65.2
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 3.8e-69 266.9 191 64.9
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 6.5e-69 266.2 198 64.6
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 6.5e-69 266.2 192 65.6
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 8.6e-69 265.8 159 76.7
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.9e-68 264.6 185 68.1
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 3.2e-68 263.8 192 62.5
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.2e-68 263.8 159 76.7
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 9.5e-68 262.3 187 64.2
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 2.8e-67 260.8 196 65.3
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.0e-66 258.8 180 67.8
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 1.4e-66 258.5 189 63.5
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 1.8e-66 258.1 192 63.0
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 2.3e-66 257.7 192 62.0
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 4.0e-66 256.9 187 62.6
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 2.0e-65 254.6 194 61.9
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.0e-65 254.6 202 63.4
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.0e-65 254.6 193 64.2
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 5.7e-65 253.1 200 61.0
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 5.7e-65 253.1 192 60.4
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 9.8e-65 252.3 228 56.6
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.8e-63 248.1 172 67.4
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 4.1e-63 246.9 192 60.4
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 9.2e-63 245.7 170 65.9
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.2e-62 245.4 161 70.8
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 5.9e-62 243.0 161 70.8
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.9e-61 240.7 182 59.9
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 2.9e-61 240.7 157 69.4
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.8e-61 240.4 182 59.3
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 3.8e-61 240.4 216 53.2
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.5e-60 238.4 191 58.6
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 1.5e-60 238.4 182 60.4
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 3.3e-60 237.3 183 61.2
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 5.6e-60 236.5 182 61.0
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.2e-59 235.3 192 57.8
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.8e-58 231.5 209 55.5
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.8e-58 231.5 209 55.0
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 2.3e-58 231.1 162 66.7
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 4.0e-58 230.3 182 59.3
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 4.0e-58 230.3 162 66.7
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 6.8e-58 229.6 159 71.7
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 8.9e-58 229.2 162 66.0
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.0e-57 228.0 165 63.0
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 2.6e-57 227.6 161 66.5
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 9.8e-57 225.7 187 58.3
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 6.4e-56 223.0 192 58.9
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 4.1e-55 220.3 153 65.4
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 1.0e-53 215.7 192 55.2
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 6.6e-53 213.0 135 73.3
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 3.3e-52 210.7 205 53.2
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 3.3e-52 210.7 182 54.9
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 3.3e-52 210.7 202 53.5
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 5.6e-52 209.9 130 76.9
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.1e-50 204.1 136 69.1
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 3.1e-50 204.1 209 51.2
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.9e-44 184.9 182 52.2
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 2.0e-41 174.9 162 54.3
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 4.1e-39 167.2 142 57.0
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 1.6e-30 138.7 124 56.5
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 3.0e-29 134.4 74 83.8
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 3.9e-29 134.0 102 58.8
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 2.8e-27 127.9 129 49.6
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 6.0e-22 110.2 130 38.5
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 1.1e-20 105.9 128 37.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 4.8e-19 100.5 135 34.8
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.1e-18 99.4 53 81.1
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 5.3e-18 97.1 54 75.9
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 3.8e-16 90.9 70 62.9
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 8.4e-16 89.7 140 32.1
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 1.1e-15 89.4 56 71.4
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.2e-15 87.4 136 33.8
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 8.7e-13 79.7 108 38.9
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 1.5e-12 79.0 107 43.0
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 7.4e-12 76.6 191 31.4
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 3.4e-09 67.8 37 78.4
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 5.8e-09 67.0 39 76.9
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.9e-08 63.9 36 80.6
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.9e-08 63.9 36 80.6
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.4e-07 62.4 50 56.0
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.4e-07 61.6 46 58.7
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 4.6e-06 57.4 36 72.2
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 4.6e-06 57.4 36 75.0
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 7.9e-06 56.6 66 40.9
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 7.9e-06 56.6 66 40.9


User provided reference genes

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