Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.3e-151 538.9 277 100.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 3.5e-107 392.1 275 72.4
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 4.9e-101 371.7 279 70.6
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.1e-95 354.0 265 67.9
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 5.2e-95 351.7 276 65.6
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.0e-94 349.7 279 65.6
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 2.6e-94 349.4 273 64.5
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 3.0e-90 335.9 275 65.8
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 3.3e-89 332.4 274 63.1
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.3e-89 332.4 270 63.3
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 9.6e-89 330.9 275 65.8
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.6e-88 328.9 270 63.3
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.8e-88 328.6 267 63.7
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.4e-87 326.2 279 58.8
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 3.1e-87 325.9 269 62.8
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 5.8e-86 321.6 260 64.6
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 9.9e-86 320.9 274 59.9
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.7e-85 320.1 263 61.2
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 6.4e-85 318.2 274 59.5
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 5.4e-84 315.1 245 64.5
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 7.1e-84 314.7 268 61.6
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 4.6e-83 312.0 259 64.5
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 1.3e-82 310.5 274 58.0
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.7e-82 310.1 262 65.6
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 3.9e-82 308.9 265 62.3
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 3.9e-82 308.9 265 61.9
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.9e-81 306.6 299 55.5
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.9e-81 306.6 254 62.6
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 9.6e-81 304.3 268 59.3
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.1e-79 300.8 274 57.3
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.4e-79 300.4 277 56.3
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 2.6e-78 296.2 271 57.9
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 2.9e-77 292.7 275 53.5
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.1e-76 290.8 267 57.7
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.4e-76 290.4 277 56.0
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 4.6e-75 285.4 273 55.7
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 3.0e-74 282.7 276 55.8
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 8.7e-74 281.2 276 54.7
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 8.7e-74 281.2 269 55.0
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.3e-73 278.9 212 68.9
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 3.7e-72 275.8 268 56.7
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 3.7e-72 275.8 268 51.1
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 6.2e-72 275.0 274 53.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 6.2e-72 275.0 261 55.2
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.1e-71 274.2 265 54.3
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 3.1e-71 272.7 262 52.7
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 3.1e-71 272.7 276 53.6
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 4.0e-71 272.3 272 54.0
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.2e-70 270.8 273 51.3
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.0e-69 267.7 273 50.5
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.0e-69 267.7 274 52.9
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.7e-69 266.9 274 52.6
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 2.2e-69 266.5 273 50.5
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 6.5e-69 265.0 274 53.6
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.1e-68 264.2 257 55.6
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.1e-68 264.2 273 52.4
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 3.2e-68 262.7 277 52.0
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 3.2e-68 262.7 265 51.3
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 7.1e-68 261.5 275 50.5
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 9.3e-68 261.2 258 51.9
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 6.0e-67 258.5 277 51.3
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 6.0e-67 258.5 268 54.5
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 7.9e-67 258.1 208 64.4
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.0e-66 257.7 276 50.0
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.3e-66 256.5 290 49.7
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 5.1e-66 255.4 251 52.6
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 9.6e-65 251.1 252 52.4
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 2.1e-64 250.0 275 49.5
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 6.3e-64 248.4 185 68.6
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 2.4e-63 246.5 264 48.9
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.1e-63 246.1 217 59.4
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 4.1e-63 245.7 269 49.1
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 3.4e-62 242.7 251 49.8
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 1.0e-61 241.1 270 49.3
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 9.3e-60 234.6 204 59.8
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 2.1e-59 233.4 289 45.0
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 2.7e-59 233.0 261 48.3
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 3.6e-59 232.6 222 53.2
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 4.6e-59 232.3 283 47.7
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 4.6e-59 232.3 280 45.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 6.7e-58 228.4 268 48.1
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.1e-57 227.6 231 52.4
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 1.9e-57 226.9 271 46.1
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 3.3e-57 226.1 257 50.2
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.8e-55 220.3 226 52.2
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.2e-54 217.6 226 51.8
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 2.0e-54 216.9 222 51.8
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 5.9e-54 215.3 218 54.1
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.6e-51 207.2 240 47.1
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.7e-51 206.5 253 46.6
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 6.3e-48 195.3 170 58.8
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 2.9e-45 186.4 196 50.0
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 6.5e-45 185.3 180 51.1
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.6e-43 179.5 171 53.2
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.9e-37 159.8 141 61.0
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 2.8e-24 116.7 108 49.1
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.0e-18 98.2 85 62.4
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 9.8e-17 91.7 254 31.1
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.1e-11 73.9 57 56.1
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.0e-10 71.6 56 55.4
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 6.4e-08 62.4 57 50.9
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 1.4e-07 61.2 92 43.5
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.2e-06 58.2 49 51.0
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 7.8e-06 55.5 62 43.5
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 7.8e-06 55.5 43 55.8


User provided reference genes

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