Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1563.9 755 100.0
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1360.1 753 86.3
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 0.0e+00 1335.1 751 83.6
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 0.0e+00 1334.3 752 84.2
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1333.5 752 84.6
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1331.6 750 85.2
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 0.0e+00 1327.8 753 83.8
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1326.6 749 83.4
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 0.0e+00 1323.9 751 83.5
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 0.0e+00 1315.8 754 82.5
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1313.9 752 82.3
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1312.0 752 82.3
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 0.0e+00 1311.2 750 82.9
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 0.0e+00 1309.7 752 83.5
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1308.1 740 83.4
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 0.0e+00 1305.4 752 81.9
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 0.0e+00 1303.1 751 82.7
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 0.0e+00 1299.6 751 82.4
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 0.0e+00 1295.8 749 80.9
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 0.0e+00 1291.2 746 81.4
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 0.0e+00 1290.8 761 81.2
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 0.0e+00 1290.8 763 81.4
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 0.0e+00 1288.5 741 82.1
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 0.0e+00 1288.1 763 80.7
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 0.0e+00 1287.3 750 81.6
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1285.4 744 81.6
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 0.0e+00 1285.0 749 81.0
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1282.7 759 80.8
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 0.0e+00 1280.8 755 80.1
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1278.8 751 81.0
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 0.0e+00 1275.4 750 80.4
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 0.0e+00 1270.0 746 80.0
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 0.0e+00 1269.6 752 79.1
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1269.2 753 80.3
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 0.0e+00 1268.8 752 80.2
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 0.0e+00 1268.1 743 79.8
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 0.0e+00 1265.4 751 79.9
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 0.0e+00 1264.2 744 80.2
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 0.0e+00 1262.7 761 79.8
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 0.0e+00 1257.7 744 80.5
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1255.4 745 79.3
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 0.0e+00 1255.0 749 79.4
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1254.6 751 79.0
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 0.0e+00 1254.2 753 79.4
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1253.4 745 80.1
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 0.0e+00 1252.7 738 80.9
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 0.0e+00 1247.6 746 79.1
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1247.3 741 80.2
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1246.9 746 79.1
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 0.0e+00 1246.1 746 79.8
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 0.0e+00 1246.1 744 78.9
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1239.6 744 79.2
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 0.0e+00 1239.2 739 78.9
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1237.6 756 78.6
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1232.6 746 78.6
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 0.0e+00 1232.2 741 79.5
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 0.0e+00 1222.2 779 76.4
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1218.4 776 75.5
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1216.1 741 78.0
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 0.0e+00 1215.3 740 76.8
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 0.0e+00 1213.7 747 77.9
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 0.0e+00 1212.6 745 76.5
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1210.7 740 77.7
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 0.0e+00 1209.1 693 83.4
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1208.0 756 75.0
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1193.3 745 76.6
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 0.0e+00 1193.3 745 76.4
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1191.0 746 76.8
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 0.0e+00 1191.0 745 76.2
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 0.0e+00 1188.7 745 76.1
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1187.9 745 76.4
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1185.2 746 76.1
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 0.0e+00 1184.9 745 76.1
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1183.3 764 76.3
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 0.0e+00 1181.0 745 76.1
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 0.0e+00 1179.9 745 76.2
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 0.0e+00 1175.6 745 75.3
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 0.0e+00 1166.8 801 70.4
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 0.0e+00 1164.1 748 74.5
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 0.0e+00 1164.1 688 80.5
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 0.0e+00 1163.3 762 73.0
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 0.0e+00 1157.1 754 75.3
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1147.9 748 75.3
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 0.0e+00 1137.9 704 77.8
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 0.0e+00 1127.1 696 76.9
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 0.0e+00 1126.7 661 81.4
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 0.0e+00 1123.6 742 73.2
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 0.0e+00 1111.3 789 68.4
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 0.0e+00 1092.8 744 71.5
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 0.0e+00 1082.4 625 83.8
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 0.0e+00 1077.0 830 65.3
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 1.5e-311 1072.4 683 75.8
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 8.2e-292 1006.9 746 63.0
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 4.1e-291 1004.6 748 62.2
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 1.4e-278 963.0 744 59.9
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 4.2e-272 941.4 610 75.1
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 4.1e-267 924.9 633 69.5
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 4.0e-254 881.7 686 64.7
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 4.9e-252 874.8 620 66.8
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-229 797.7 683 55.9
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 1.2e-221 773.9 521 70.8
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 1.0e-172 611.3 797 42.9
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 5.9e-165 585.5 595 55.0
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 1.2e-154 551.2 354 68.9
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.6e-130 471.1 278 77.0
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 5.2e-97 359.8 261 65.5
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.4e-89 335.1 289 63.0
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 4.5e-80 303.5 226 67.3
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 4.3e-75 287.0 254 60.2
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 2.3e-60 238.0 148 74.3
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 2.2e-47 194.9 122 73.8
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 2.1e-45 188.3 127 70.1
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 3.6e-45 187.6 143 65.7
HPP92_011833 Vanilla planifolia HOM05D000161 ORTHO05D036718 1.5e-38 165.6 83 84.3
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 4.7e-29 134.0 94 68.1
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 2.2e-26 125.2 161 46.6
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 1.0e-23 116.3 111 49.5
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 1.8e-20 105.5 110 55.5
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.8e-17 95.5 62 74.2
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 5.9e-16 90.5 56 78.6
Medtr3g438040 Medicago truncatula HOM05D000161 ORTHO05D036718 1.9e-14 85.5 48 79.2
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.8e-12 79.0 43 76.7
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 1.6e-08 65.9 41 75.6
Medtr5g010890 Medicago truncatula HOM05D000161 ORTHO05D036718 1.0e-07 63.2 49 65.3
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 1.7e-07 62.4 70 50.0


User provided reference genes

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