Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 3.6e-52 208.0 106 100.0
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 5.2e-35 151.0 89 82.0
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 1.2e-34 149.8 91 81.3
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.5e-34 149.4 90 78.9
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.5e-34 149.4 89 79.8
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 1.7e-33 146.0 92 79.3
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.7e-33 146.0 91 79.1
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 1.7e-33 146.0 93 78.5
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 2.9e-33 145.2 94 76.6
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.9e-33 145.2 91 78.0
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.7e-33 144.8 90 77.8
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.7e-33 144.8 89 77.5
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.4e-32 142.9 90 80.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 1.4e-32 142.9 93 74.2
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 1.4e-32 142.9 93 74.2
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 1.4e-32 142.9 93 76.3
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 2.4e-32 142.1 93 75.3
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.4e-32 142.1 93 74.2
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 2.4e-32 142.1 93 76.3
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 3.2e-32 141.7 92 78.3
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.2e-32 141.7 92 73.9
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.2e-32 141.7 92 73.9
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 3.2e-32 141.7 92 77.2
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 3.2e-32 141.7 93 75.3
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 4.1e-32 141.4 95 75.8
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.1e-32 141.4 92 75.0
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 5.4e-32 141.0 93 76.3
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 5.4e-32 141.0 92 77.2
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 5.4e-32 141.0 94 74.5
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.4e-32 141.0 92 76.1
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 7.0e-32 140.6 93 74.2
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 7.0e-32 140.6 92 78.3
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 7.0e-32 140.6 93 74.2
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 9.2e-32 140.2 91 79.1
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 9.2e-32 140.2 97 71.1
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 9.2e-32 140.2 93 76.3
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 9.2e-32 140.2 92 73.9
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 1.2e-31 139.8 93 71.0
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 1.6e-31 139.4 96 72.9
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.6e-31 139.4 91 75.8
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.6e-31 139.4 91 75.8
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.6e-31 139.4 93 72.0
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.6e-31 139.4 93 73.1
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.6e-31 139.4 92 71.7
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.6e-31 139.4 92 71.7
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 2.0e-31 139.0 95 72.6
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 2.7e-31 138.7 94 72.3
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 2.7e-31 138.7 92 73.9
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 2.7e-31 138.7 93 73.1
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.7e-31 138.7 95 71.6
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.7e-31 138.7 95 71.6
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.7e-31 138.7 95 71.6
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 2.7e-31 138.7 93 73.1
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 2.7e-31 138.7 91 74.7
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 3.5e-31 138.3 93 71.0
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.5e-31 138.3 91 76.9
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.5e-31 138.3 92 72.8
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.5e-31 138.3 92 72.8
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 4.6e-31 137.9 94 72.3
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 4.6e-31 137.9 92 75.0
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 4.6e-31 137.9 93 74.2
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 5.9e-31 137.5 91 74.7
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.9e-31 137.5 90 73.3
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.8e-31 137.1 91 74.7
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 7.8e-31 137.1 92 75.0
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.8e-31 137.1 79 79.7
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 1.0e-30 136.7 92 73.9
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.0e-30 136.7 93 72.0
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.0e-30 136.7 93 71.0
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 1.0e-30 136.7 93 72.0
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.3e-30 136.3 91 73.6
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.3e-30 136.3 93 72.0
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.3e-30 136.3 92 72.8
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.7e-30 136.0 91 73.6
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.7e-30 136.0 94 75.5
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.7e-30 136.0 94 75.5
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 1.7e-30 136.0 97 71.1
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 3.0e-30 135.2 93 72.0
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 3.0e-30 135.2 92 72.8
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 3.0e-30 135.2 92 72.8
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 5.0e-30 134.4 93 73.1
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 6.6e-30 134.0 92 73.9
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 6.6e-30 134.0 110 61.8
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 6.6e-30 134.0 93 72.0
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 8.6e-30 133.7 92 68.5
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 1.1e-29 133.3 92 71.7
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.1e-29 133.3 92 70.7
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 1.9e-29 132.5 92 72.8
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.9e-29 132.5 92 72.8
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 2.5e-29 132.1 95 71.6
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 2.5e-29 132.1 101 66.3
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.3e-29 131.7 94 69.1
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 4.3e-29 131.3 93 68.8
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 7.3e-29 130.6 95 69.5
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 7.3e-29 130.6 92 71.7
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 7.3e-29 130.6 86 70.9
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 9.5e-29 130.2 93 68.8
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.5e-29 130.2 92 67.4
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 9.5e-29 130.2 94 68.1
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.2e-28 129.8 81 76.5
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.2e-28 129.8 93 69.9
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.6e-28 129.4 91 73.6
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.6e-28 129.4 87 66.7
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.6e-28 129.4 93 68.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 2.1e-28 129.0 80 73.8
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.1e-28 129.0 92 66.3
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 2.1e-28 129.0 95 66.3
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.8e-28 128.6 92 69.6
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.6e-28 128.3 92 67.4
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.0e-27 126.7 94 67.0
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 1.4e-27 126.3 92 68.5
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.8e-27 125.9 92 67.4
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.8e-27 125.9 92 68.5
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.3e-27 125.6 92 66.3
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 2.3e-27 125.6 89 66.3
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 2.3e-27 125.6 90 68.9
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 3.1e-27 125.2 91 65.9
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.0e-27 124.8 92 66.3
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.2e-27 124.4 90 67.8
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.2e-27 124.4 86 68.6
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 5.2e-27 124.4 90 67.8
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 8.9e-27 123.6 92 69.6
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 8.9e-27 123.6 85 67.1
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 8.9e-27 123.6 92 68.5
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 8.9e-27 123.6 95 67.4
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 8.9e-27 123.6 95 67.4
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 1.2e-26 123.2 89 64.0
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 1.2e-26 123.2 92 66.3
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.5e-26 122.9 92 67.4
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 2.0e-26 122.5 85 67.1
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 2.0e-26 122.5 85 67.1
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 2.0e-26 122.5 85 67.1
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 2.6e-26 122.1 85 67.1
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 2.6e-26 122.1 85 67.1
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 2.6e-26 122.1 92 66.3
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 5.8e-26 120.9 107 60.7
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 5.8e-26 120.9 92 68.5
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 7.5e-26 120.6 92 66.3
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.2e-25 119.0 88 67.0
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.9e-25 118.6 92 64.1
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 3.7e-25 118.2 96 62.5
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.9e-25 117.9 79 67.1
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 4.9e-25 117.9 97 61.9
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 6.4e-25 117.5 84 70.2
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 3.2e-24 115.2 92 63.0
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 3.2e-24 115.2 81 69.1
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 5.4e-24 114.4 81 70.4
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 7.0e-24 114.0 91 63.7
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 1.6e-23 112.8 91 58.2
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 3.5e-23 111.7 78 70.5
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.3e-22 109.8 79 67.1
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.3e-22 109.0 96 59.4
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 1.9e-21 105.9 83 66.3
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 5.6e-21 104.4 100 55.0
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 7.3e-21 104.0 96 60.4
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 6.2e-20 100.9 68 67.6
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.1e-19 100.1 80 62.5
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 4.0e-19 98.2 65 72.3
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 3.7e-17 91.7 91 51.6
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.4e-16 89.7 61 67.2
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 7.1e-16 87.4 71 62.0
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.6e-15 84.7 94 46.8
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.6e-14 80.9 66 57.6
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.9e-13 79.3 67 52.2
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 1.9e-13 79.3 72 62.5
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.9e-13 79.3 71 49.3
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.3e-13 78.6 52 76.9
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 1.4e-11 73.2 91 41.8
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.4e-11 73.2 73 42.5
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 5.8e-10 67.8 38 76.3
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.3e-06 56.6 60 43.3
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 6.6e-06 54.3 47 51.1
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.6e-06 53.9 66 34.8


User provided reference genes

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