Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 4.4e-89 331.3 166 100.0
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 6.2e-67 257.7 192 69.8
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.2e-66 254.6 147 83.7
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.3e-61 240.0 163 75.5
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.7e-61 239.6 171 71.3
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 6.6e-61 237.7 149 83.2
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 3.3e-60 235.3 163 73.0
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.1e-58 230.3 143 77.6
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 4.0e-58 228.4 162 71.0
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 6.8e-58 227.6 168 69.6
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.6e-57 225.7 157 72.6
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 3.4e-57 225.3 135 79.3
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 4.4e-57 224.9 171 70.2
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.4e-57 224.9 135 79.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 4.4e-57 224.9 164 72.0
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 5.8e-57 224.6 162 69.1
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 7.6e-57 224.2 164 72.0
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 9.9e-57 223.8 135 80.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 9.9e-57 223.8 166 68.1
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 9.9e-57 223.8 144 75.0
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.3e-56 223.4 133 81.2
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.3e-56 223.4 150 77.3
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.9e-56 222.2 135 80.0
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 3.8e-56 221.9 166 69.3
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 4.9e-56 221.5 166 69.3
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 4.9e-56 221.5 166 69.3
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 4.9e-56 221.5 162 67.3
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 8.4e-56 220.7 150 77.3
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.1e-55 220.3 146 74.7
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 2.4e-55 219.2 164 66.5
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 3.2e-55 218.8 146 74.0
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 9.3e-55 217.2 165 67.9
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 9.3e-55 217.2 131 81.7
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.6e-54 216.5 162 69.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 3.5e-54 215.3 159 68.6
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 3.5e-54 215.3 146 74.0
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 7.8e-54 214.2 129 81.4
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 7.8e-54 214.2 166 68.1
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.3e-53 213.4 163 69.3
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 2.3e-53 212.6 159 67.3
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 3.9e-53 211.8 154 70.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 3.9e-53 211.8 162 66.0
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 3.9e-53 211.8 163 68.1
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 8.7e-53 210.7 159 66.7
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.1e-52 210.3 166 65.7
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.9e-52 209.5 159 67.9
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 2.5e-52 209.1 166 68.7
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.5e-52 209.1 166 68.1
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 5.6e-52 208.0 162 64.2
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 3.6e-51 205.3 155 68.4
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 4.8e-51 204.9 162 63.6
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 6.2e-51 204.5 108 90.7
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 8.1e-51 204.1 170 67.6
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 8.1e-51 204.1 129 76.0
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 8.1e-51 204.1 166 66.9
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 1.1e-50 203.8 166 61.4
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 1.8e-50 203.0 173 65.3
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 4.0e-50 201.8 162 61.7
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 6.9e-50 201.1 153 64.1
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 6.9e-50 201.1 170 65.9
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 9.0e-50 200.7 136 75.0
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 4.4e-49 198.4 162 64.8
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 4.9e-48 194.9 135 74.1
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 8.4e-48 194.1 181 55.8
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.1e-47 193.7 161 64.0
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.9e-47 193.0 170 60.6
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.9e-47 193.0 152 63.2
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 6.0e-46 188.0 112 83.0
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 6.6e-45 184.5 166 59.6
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 6.6e-45 184.5 153 62.1
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.5e-44 183.3 107 84.1
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.6e-44 181.4 107 80.4
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 3.6e-43 178.7 108 79.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.1e-42 177.2 102 81.4
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.1e-42 177.2 102 81.4
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.1e-42 177.2 175 56.0
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 6.9e-42 174.5 103 79.6
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.2e-41 173.7 159 62.9
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 2.9e-40 169.1 144 67.4
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 3.8e-40 168.7 107 73.8
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.4e-39 166.0 104 78.8
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 1.6e-38 163.3 157 58.6
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 1.8e-37 159.8 122 64.8
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 2.3e-37 159.5 122 63.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 3.0e-37 159.1 157 51.6
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 3.9e-37 158.7 162 53.1
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 5.1e-37 158.3 108 69.4
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.1e-36 157.1 124 63.7
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.5e-36 156.8 158 55.7
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 1.3e-35 153.7 129 58.9
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.6e-35 153.3 108 69.4
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 1.6e-35 153.3 115 66.1
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 4.8e-35 151.8 134 63.4
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 6.2e-35 151.4 112 65.2
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.2e-30 137.1 98 73.5
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 2.8e-27 125.9 85 69.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 2.8e-27 125.9 102 60.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 4.3e-20 102.1 80 66.2
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.4e-17 92.4 98 59.2
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.7e-11 73.6 69 56.5
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 2.0e-09 66.6 111 36.9
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 6.5e-08 61.6 108 31.5
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.1e-07 60.8 42 66.7
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.1e-07 60.8 42 66.7


User provided reference genes

Program Settings