Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 4.7e-180 635.2 553 100.0
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 2.4e-123 446.8 252 93.3
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 2.5e-88 330.5 354 52.0
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 5.6e-88 329.3 355 50.7
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 1.6e-87 327.8 328 54.3
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 1.6e-87 327.8 369 47.7
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 2.1e-87 327.4 340 55.6
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 2.3e-86 323.9 345 51.9
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 5.8e-85 319.3 345 50.1
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 9.8e-85 318.5 358 49.2
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 1.7e-84 317.8 356 49.4
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 2.9e-84 317.0 340 48.8
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 8.3e-84 315.5 318 49.1
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.1e-83 315.1 318 49.1
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 1.1e-83 315.1 359 50.7
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.9e-83 314.3 318 49.1
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 2.4e-83 313.9 355 48.5
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 4.1e-83 313.2 317 48.9
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 7.0e-83 312.4 355 47.3
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 2.3e-81 307.4 356 46.6
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 3.0e-81 307.0 360 46.4
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 3.0e-81 307.0 331 50.5
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 8.6e-81 305.4 358 46.9
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 8.6e-81 305.4 354 48.0
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 3.3e-80 303.5 321 49.5
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 3.3e-80 303.5 354 48.3
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 4.3e-80 303.1 338 50.6
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 4.3e-80 303.1 328 49.7
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 1.2e-79 301.6 354 48.6
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 4.7e-79 299.7 347 47.8
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 4.0e-78 296.6 337 47.2
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 5.2e-78 296.2 325 48.3
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 6.8e-78 295.8 325 47.4
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 1.2e-77 295.0 347 47.0
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 2.6e-77 293.9 324 48.8
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 4.4e-77 293.1 370 45.4
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 2.2e-76 290.8 325 46.8
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 2.9e-76 290.4 334 50.0
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 4.9e-76 289.7 365 42.7
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 1.1e-75 288.5 345 53.9
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 1.9e-75 287.7 320 47.2
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 1.1e-72 278.5 350 45.4
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 5.6e-72 276.2 350 45.1
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 7.3e-72 275.8 350 45.1
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 4.7e-71 273.1 360 43.9
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 1.2e-69 268.5 221 60.6
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 3.4e-69 266.9 325 44.6
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 1.3e-68 265.0 352 48.9
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 1.9e-67 261.2 356 50.0
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 5.4e-67 259.6 337 48.4
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 7.8e-66 255.8 267 53.9
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 9.6e-64 248.8 366 40.7
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 9.6e-64 248.8 264 50.4
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 9.6e-64 248.8 337 43.3
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 2.1e-63 247.7 225 58.7
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 4.0e-62 243.4 335 40.0
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 1.2e-61 241.9 254 51.6
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 2.6e-61 240.7 253 51.4
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 4.4e-61 240.0 244 51.6
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 5.8e-61 239.6 265 52.1
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 7.6e-61 239.2 348 48.6
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 2.4e-59 234.2 264 48.9
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 7.1e-59 232.6 244 51.2
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 1.2e-58 231.9 354 39.0
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 3.5e-58 230.3 329 40.4
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 6.0e-58 229.6 325 42.5
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 3.9e-57 226.9 233 51.5
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 5.1e-57 226.5 327 40.1
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 5.1e-57 226.5 347 40.3
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 3.3e-56 223.8 325 41.8
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 9.6e-56 222.2 346 39.6
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 1.3e-55 221.9 325 41.2
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 1.6e-55 221.5 346 39.3
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 2.8e-55 220.7 292 44.2
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 1.1e-54 218.8 326 40.2
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 5.3e-54 216.5 347 38.9
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 5.3e-54 216.5 347 38.9
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 5.3e-54 216.5 258 44.6
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 3.4e-53 213.8 189 68.3
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 3.4e-53 213.8 251 44.6
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 9.9e-53 212.2 189 58.2
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 8.4e-52 209.1 189 57.1
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.9e-51 208.0 308 37.3
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 4.2e-51 206.8 201 53.2
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 1.9e-48 198.0 347 37.2
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 4.3e-48 196.8 204 52.0
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 2.8e-47 194.1 262 41.6
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 9.0e-46 189.1 329 34.0
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 1.2e-45 188.7 329 34.0
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 1.4e-43 181.8 186 53.8
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 2.4e-43 181.0 234 45.3
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 2.3e-41 174.5 319 37.3
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 5.3e-38 163.3 309 44.3
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 7.9e-34 149.4 326 38.3
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 1.9e-32 144.8 311 28.6
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 1.3e-31 142.1 310 29.4
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 7.6e-29 132.9 157 45.9
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 1.5e-24 118.6 116 51.7
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 2.4e-22 111.3 106 53.8
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 9.0e-22 109.4 287 26.1
Atru.chr11.1056 Acer truncatum HOM05D007280 ORTHO05D009108 3.7e-15 87.4 60 66.7
MBI03_g47433_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 1.0e-09 69.3 41 73.2
SalBow3G4579 Salvia bowleyana HOM05D007280 ORTHO05D009108 6.7e-09 66.6 77 42.9
QL03p001266 Quercus lobata HOM05D005622 ORTHO05D002854 9.7e-08 62.8 190 24.2
QL03p000909 Quercus lobata HOM05D005622 ORTHO05D002854 2.2e-07 61.6 190 23.7
Lj3P1030T40 Lonicera japonica HOM05D005622 ORTHO05D002854 3.7e-07 60.8 249 22.5
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 4.8e-07 60.5 131 28.2
FAN22G2182 Fragaria x ananassa HOM05D007280 ORTHO05D009108 6.3e-07 60.1 36 75.0
AL7G14330 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 8.2e-07 59.7 248 21.4
AT4G36680 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 8.2e-07 59.7 248 21.0
Phvul.003G043300 Phaseolus vulgaris HOM05D005622 ORTHO05D002854 1.1e-06 59.3 247 19.8
Sp7g18820 Schrenkiella parvula HOM05D005973 ORTHO05D007285 1.8e-06 58.5 261 24.9
Potri.011G057900 Populus trichocarpa HOM05D002986 ORTHO05D007611 3.1e-06 57.8 193 25.9
ECA246G3879 Erigeron canadensis HOM05D005622 ORTHO05D002854 4.1e-06 57.4 252 21.4
Prupe.1G285700 Prunus persica HOM05D005622 ORTHO05D002854 4.1e-06 57.4 249 21.3
THA.LOC104808568 Tarenaya hassleriana HOM05D005622 ORTHO05D002854 5.3e-06 57.0 250 22.0
A07p07090 Brassica napus HOM05D007486 ORTHO05D003673 7.0e-06 56.6 139 25.9
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 9.1e-06 56.2 121 29.8
PSO017G6569 Papaver somniferum HOM05D007486 ORTHO05D003673 9.1e-06 56.2 183 24.6


User provided reference genes

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