Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 0.0e+00 1177.5 592 100.0
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 3.6e-210 735.3 564 67.0
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.6e-208 729.2 552 67.9
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.6e-205 719.9 565 66.7
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.7e-199 699.9 569 65.4
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 4.9e-199 698.4 576 64.1
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 4.1e-198 695.3 562 64.8
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.4e-198 694.9 535 66.5
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 7.0e-198 694.5 566 63.4
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 9.2e-198 694.1 546 65.8
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.9e-195 686.4 523 67.7
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 2.2e-191 672.9 519 65.7
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.9e-191 672.5 540 64.1
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 9.5e-187 657.5 631 57.4
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.7e-183 646.7 558 62.0
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 4.9e-183 645.2 518 63.9
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 4.9e-183 645.2 527 61.5
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.4e-182 642.9 560 61.6
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 7.1e-182 641.3 560 61.6
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.2e-181 640.6 551 61.5
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 7.8e-181 637.9 632 56.0
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 2.3e-180 636.3 590 57.8
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 6.6e-180 634.8 524 61.1
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.5e-179 633.6 529 64.3
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 8.1e-178 627.9 546 59.7
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 3.1e-177 625.9 542 59.0
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.9e-175 619.4 576 58.0
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 5.4e-174 615.1 572 58.7
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 9.3e-174 614.4 547 59.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 2.1e-173 613.2 526 60.6
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 2.7e-173 612.8 550 58.9
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 3.5e-173 612.5 546 59.0
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 3.5e-173 612.5 538 59.9
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.3e-172 610.5 544 59.9
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.7e-172 610.1 547 58.5
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 3.9e-172 609.0 539 60.3
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.1e-171 607.4 518 61.4
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.5e-171 607.1 528 58.7
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.9e-171 606.7 601 54.7
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.3e-171 604.7 539 59.4
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.8e-170 602.8 542 59.8
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.6e-170 602.4 509 61.1
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 3.6e-170 602.4 559 58.7
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 8.1e-170 601.3 532 60.2
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.5e-168 597.0 504 63.7
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 5.8e-168 595.1 563 56.7
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 7.6e-168 594.7 550 58.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 2.2e-167 593.2 511 60.1
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 2.2e-167 593.2 522 59.0
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.9e-167 592.8 523 59.3
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 4.2e-166 589.0 566 56.9
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.7e-165 586.3 550 58.5
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.5e-165 585.9 584 55.7
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 4.6e-165 585.5 499 61.7
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 6.0e-165 585.1 537 58.5
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.9e-163 580.1 468 66.0
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 7.4e-163 578.2 524 58.2
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.1e-161 574.3 553 55.9
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.5e-160 570.5 421 69.4
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 9.3e-158 561.2 554 54.3
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 2.5e-155 553.1 523 55.8
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.6e-154 550.4 524 57.8
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 2.1e-154 550.1 524 56.7
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 5.3e-153 545.4 466 62.0
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 5.8e-152 542.0 524 55.9
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 5.8e-152 542.0 570 54.4
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-151 540.8 524 56.1
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 2.2e-151 540.0 532 55.6
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 2.9e-151 539.7 535 55.0
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 4.9e-151 538.9 518 56.8
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 4.9e-151 538.9 535 55.0
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 6.5e-151 538.5 545 54.5
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.1e-150 537.7 519 56.6
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.1e-150 537.7 519 56.6
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.9e-150 537.0 520 56.3
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 4.2e-150 535.8 522 54.8
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 5.5e-150 535.4 524 56.5
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.2e-149 534.3 552 56.0
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 2.1e-149 533.5 523 54.9
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 2.1e-149 533.5 536 54.7
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.0e-148 531.2 524 54.4
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.8e-148 530.4 481 58.0
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.1e-145 521.2 515 53.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 5.9e-144 515.4 535 52.1
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 6.5e-143 511.9 545 53.0
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 8.5e-143 511.5 523 54.3
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.9e-142 510.4 534 52.4
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 2.5e-142 510.0 556 51.6
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 7.9e-141 505.0 566 50.7
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.7e-140 501.9 516 55.2
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.2e-136 491.1 388 66.8
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.9e-135 486.5 563 49.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.7e-133 479.9 554 48.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 3.6e-133 479.6 340 70.9
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.1e-121 439.9 254 81.9
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 7.0e-121 438.7 386 60.1
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 2.9e-111 406.8 544 42.1
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-108 397.9 267 73.0
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.2e-107 394.8 540 42.4
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.0e-107 394.0 308 66.2
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.4e-105 387.9 534 41.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.8e-101 373.6 450 48.2
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.9e-95 353.6 414 49.3
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 7.5e-91 339.0 211 76.8
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 4.1e-81 306.6 236 62.3
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 5.1e-79 299.7 284 51.4
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 4.1e-73 280.0 460 37.6
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-70 271.6 246 58.9
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 2.1e-56 224.6 164 67.1
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 3.3e-54 217.2 256 50.4
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 3.1e-52 210.7 249 43.4
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.8e-47 194.9 468 28.8
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.4e-46 189.5 270 43.3
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 5.1e-39 166.8 221 44.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 4.3e-38 163.7 249 44.2
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 3.7e-37 160.6 217 42.4
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.0e-35 154.8 186 50.0
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 3.0e-31 141.0 106 68.9
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 4.3e-30 137.1 115 59.1
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 8.2e-29 132.9 218 39.0
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.2e-25 119.8 157 44.6
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.1e-23 113.6 162 41.4
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 2.4e-20 104.8 313 27.8
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 5.3e-20 103.6 149 41.6
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 8.5e-18 96.3 167 42.5
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-17 95.5 45 93.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.1e-16 90.1 73 60.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.4e-15 89.0 200 34.0
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 7.4e-14 83.2 39 92.3
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 8.2e-13 79.7 65 63.1
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.0e-08 63.2 111 35.1
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 7.5e-06 56.6 38 65.8


User provided reference genes

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