Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008248001 Vitis vinifera HOM05D002984 ORTHO05D003561 4.8e-76 287.7 142 100.0
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 4.4e-37 158.3 124 61.3
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 7.4e-37 157.5 122 62.3
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 2.8e-36 155.6 121 62.8
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 1.1e-35 153.7 121 62.0
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.3e-35 151.4 121 61.2
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.3e-35 151.4 121 61.2
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 5.3e-35 151.4 121 61.2
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 9.1e-35 150.6 124 59.7
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 1.2e-34 150.2 121 60.3
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.6e-34 149.8 121 60.3
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.6e-34 149.8 121 60.3
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 1.6e-34 149.8 121 58.7
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.6e-34 149.8 121 59.5
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.6e-34 149.8 121 58.7
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 4.5e-34 148.3 121 60.3
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 4.5e-34 148.3 124 57.3
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.3e-33 146.7 121 59.5
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 1.3e-33 146.7 122 59.8
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.2e-33 146.0 121 59.5
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.2e-33 146.0 121 59.5
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 2.2e-33 146.0 121 59.5
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 2.9e-33 145.6 122 60.7
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 2.9e-33 145.6 123 56.1
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 3.8e-33 145.2 121 58.7
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 3.8e-33 145.2 121 58.7
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 3.8e-33 145.2 121 58.7
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 5.0e-33 144.8 121 57.9
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 6.5e-33 144.4 121 56.2
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 6.5e-33 144.4 121 57.9
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 8.5e-33 144.1 121 58.7
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 1.1e-32 143.7 121 57.9
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 1.5e-32 143.3 121 56.2
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.5e-32 143.3 121 58.7
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.5e-32 143.3 121 58.7
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 1.5e-32 143.3 121 59.5
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 1.5e-32 143.3 121 58.7
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 7.2e-32 141.0 139 52.5
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 9.4e-32 140.6 122 57.4
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 9.4e-32 140.6 121 57.0
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 1.2e-31 140.2 121 59.5
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 1.2e-31 140.2 121 59.5
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 1.6e-31 139.8 121 57.0
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 1.6e-31 139.8 121 56.2
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 2.7e-31 139.0 121 58.7
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.6e-31 138.7 121 57.0
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 3.6e-31 138.7 121 55.4
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 4.7e-31 138.3 121 57.0
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 8.0e-31 137.5 124 53.2
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 1.0e-30 137.1 121 59.5
QL10p023599 Quercus lobata HOM05D002984 ORTHO05D003561 1.8e-30 136.3 124 54.8
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 2.3e-30 136.0 121 57.9
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.0e-30 135.6 121 57.9
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 5.2e-30 134.8 124 54.8
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.2e-29 133.7 124 52.4
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 1.2e-29 133.7 121 56.2
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 1.2e-29 133.7 121 55.4
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 1.2e-29 133.7 121 55.4
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 1.5e-29 133.3 121 58.7
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 1.5e-29 133.3 122 57.4
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 1.5e-29 133.3 156 47.4
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 2.6e-29 132.5 122 54.1
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 2.6e-29 132.5 121 55.4
Dinv40427 Davidia involucrata HOM05D002984 ORTHO05D003561 3.3e-29 132.1 149 51.7
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 4.4e-29 131.7 121 54.5
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 5.7e-29 131.3 124 54.8
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 5.7e-29 131.3 122 53.3
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 5.7e-29 131.3 121 53.7
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 9.7e-29 130.6 121 52.9
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.3e-28 130.2 121 55.4
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 1.7e-28 129.8 121 50.4
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 1.7e-28 129.8 121 55.4
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 2.2e-28 129.4 122 55.7
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.8e-28 129.0 122 53.3
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 2.8e-28 129.0 124 50.8
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 3.7e-28 128.6 121 52.9
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 4.8e-28 128.3 125 49.6
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 4.8e-28 128.3 125 49.6
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 4.8e-28 128.3 124 50.0
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 6.3e-28 127.9 121 51.2
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 6.3e-28 127.9 125 49.6
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 6.3e-28 127.9 125 49.6
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 6.3e-28 127.9 112 55.4
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 8.2e-28 127.5 125 48.8
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 8.2e-28 127.5 121 52.1
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 8.2e-28 127.5 121 51.2
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.1e-27 127.1 122 52.5
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.1e-27 127.1 121 53.7
Glyma.02G098500 Glycine max HOM05D002984 ORTHO05D003561 1.8e-27 126.3 121 49.6
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 1.8e-27 126.3 121 50.4
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 1.8e-27 126.3 121 52.1
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 2.4e-27 125.9 121 50.4
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 2.4e-27 125.9 121 49.6
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 2.4e-27 125.9 121 49.6
Glyma.01G086600 Glycine max HOM05D002984 ORTHO05D003561 5.3e-27 124.8 121 50.4
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 5.3e-27 124.8 121 49.6
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 7.0e-27 124.4 121 49.6
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 7.0e-27 124.4 121 49.6
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 7.0e-27 124.4 125 48.0
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 7.0e-27 124.4 121 49.6
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.2e-26 123.6 124 51.6
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 1.6e-26 123.2 119 52.9
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 2.0e-26 122.9 121 49.6
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 2.0e-26 122.9 121 49.6
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 2.0e-26 122.9 125 48.8
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 3.5e-26 122.1 121 48.8
PGSC0003DMG401000817 Solanum tuberosum HOM05D002984 ORTHO05D003561 3.5e-26 122.1 121 52.9
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 3.5e-26 122.1 129 51.9
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 4.5e-26 121.7 124 52.4
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 5.9e-26 121.3 125 48.0
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 5.9e-26 121.3 125 48.0
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 5.9e-26 121.3 125 48.0
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 7.7e-26 120.9 121 52.9
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 7.7e-26 120.9 125 48.8
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 7.7e-26 120.9 121 50.4
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 1.3e-25 120.2 125 48.8
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 1.3e-25 120.2 121 52.1
CAN.G674.44 Capsicum annuum HOM05D002984 ORTHO05D003561 2.9e-25 119.0 121 52.9
SGA_v2.0_scaffold14G06838 Striga asiatica HOM05D002984 ORTHO05D003561 2.9e-25 119.0 124 49.2
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 3.8e-25 118.6 125 47.2
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 3.8e-25 118.6 121 48.8
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 5.0e-25 118.2 121 47.9
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 5.0e-25 118.2 125 48.0
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 8.5e-25 117.5 122 50.0
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 1.9e-24 116.3 190 38.4
FAN13G1615 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.2e-24 115.5 138 51.4
RcHm_v2.0_Chr7g0184721 Rosa chinensis HOM05D002984 ORTHO05D003561 4.2e-24 115.2 133 51.9
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 9.4e-24 114.0 160 42.5
FvH4_5g12610 Fragaria vesca HOM05D002984 ORTHO05D003561 1.2e-23 113.6 142 50.0
FAN18G2176 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.6e-23 113.2 142 49.3
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 3.6e-23 112.1 99 54.5
Cpa.g.sc13.36 Carica papaya HOM05D002984 ORTHO05D003561 6.1e-23 111.3 123 45.5
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 8.0e-23 110.9 122 53.3
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 1.0e-22 110.5 125 46.4
FAN04G1620 Fragaria x ananassa HOM05D002984 ORTHO05D003561 5.2e-22 108.2 143 48.3
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 5.2e-22 108.2 123 46.3
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 6.8e-22 107.8 121 47.1
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 6.8e-22 107.8 121 49.6
FAN18G0496 Fragaria x ananassa HOM05D002984 ORTHO05D003561 6.8e-22 107.8 144 48.6
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 4.4e-21 105.1 121 47.9
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 4.4e-21 105.1 129 44.2
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 1.7e-20 103.2 124 42.7
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.7e-20 103.2 126 48.4
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 1.1e-19 100.5 138 39.9
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.4e-19 100.1 87 50.6
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 7.0e-19 97.8 93 52.7
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 7.0e-19 97.8 86 52.3
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 9.1e-19 97.4 87 57.5
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 9.1e-19 97.4 87 57.5
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 7.7e-18 94.4 120 44.2
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 1.7e-17 93.2 120 43.3
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 2.5e-16 89.4 76 53.9
ECA246G2084 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.6e-15 86.7 121 45.5
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 1.0e-14 84.0 85 48.2
Lalb_Chr14g0371321 Lupinus albus HOM05D002984 ORTHO05D003561 1.4e-14 83.6 124 37.1
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 1.4e-14 83.6 76 53.9
Phvul.004G160600 Phaseolus vulgaris HOM05D002984 ORTHO05D014229 1.8e-14 83.2 120 40.8
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 2.3e-14 82.8 72 56.9
Lj2g0016414 Lotus japonicus HOM05D002984 ORTHO05D022868 5.2e-14 81.6 121 39.7
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 5.2e-14 81.6 82 47.6
VMungo0464G0094 Vigna mungo HOM05D002984 ORTHO05D014229 8.9e-14 80.9 121 40.5
Sc04g0003680 Simmondsia chinensis HOM05D002984 ORTHO05D003561 2.0e-13 79.7 125 37.6
Glyma.20G031800 Glycine max HOM05D002984 ORTHO05D014229 2.6e-13 79.3 120 40.0
Phvul.004G160500 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 2.6e-13 79.3 126 37.3
Psat1g039440 Pisum sativum HOM05D002984 ORTHO05D022868 4.4e-13 78.6 121 39.7
Medtr6g085080 Medicago truncatula HOM05D002984 ORTHO05D022868 5.7e-13 78.2 121 41.3
Medtr6g085100 Medicago truncatula HOM05D002984 ORTHO05D022868 5.7e-13 78.2 121 41.3
TPR.G31455 Trifolium pratense HOM05D002984 ORTHO05D022868 7.5e-13 77.8 121 39.7
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 8.3e-12 74.3 96 44.8
Actinidia39817 Actinidia chinensis HOM05D002984 ORTHO05D003561 1.1e-11 73.9 101 44.6
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.4e-11 72.8 97 41.2
Lalb_Chr00c63g0413851 Lupinus albus HOM05D002984 ORTHO05D003561 5.4e-11 71.6 101 39.6
Lalb_Chr08g0231921 Lupinus albus HOM05D002984 ORTHO05D003561 5.4e-11 71.6 101 39.6
ECA246G1507 Erigeron canadensis HOM05D002984 ORTHO05D003561 4.5e-10 68.6 121 38.0
Lalb_Chr11g0074771 Lupinus albus HOM05D002984 ORTHO05D003561 5.9e-10 68.2 74 47.3
arahy.Tifrunner.gnm1.ann1.53ZNG0 Arachis hypogaea HOM05D002984 ORTHO05D003561 3.8e-09 65.5 130 33.8
arahy.Tifrunner.gnm1.ann1.48S2GI Arachis hypogaea HOM05D002984 ORTHO05D003561 8.6e-09 64.3 127 33.9
CBR_g38147 Chara braunii HOM05D000019 ORTHO05D000353 2.5e-08 62.8 72 48.6
SMO340G0161 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 7.3e-08 61.2 105 41.0
VMungo0251G1889 Vigna mungo HOM05D002984 ORTHO05D003561 1.2e-07 60.5 124 39.5
VMungo0464G1061 Vigna mungo HOM05D002984 ORTHO05D003561 2.1e-07 59.7 103 34.0
SEGI_18915 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.0e-07 57.8 78 41.0
SEGI_09967 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 3.0e-06 55.8 80 38.8


User provided reference genes

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