Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 2.1e-310 1068.1 528 100.0
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.0e-252 875.5 526 80.4
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 9.9e-252 873.2 529 78.6
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 4.9e-251 870.9 528 79.9
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.1e-250 869.8 529 79.4
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 3.9e-248 861.3 540 78.1
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 5.6e-247 857.4 531 78.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 5.6e-247 857.4 528 77.8
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 7.3e-247 857.1 559 75.7
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 4.7e-246 854.4 528 77.7
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 6.2e-246 854.0 533 77.5
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.8e-245 852.4 528 77.3
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 4.0e-245 851.3 536 78.7
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 4.0e-245 851.3 569 73.6
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 9.0e-245 850.1 536 77.1
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 9.0e-245 850.1 530 77.4
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 2.6e-244 848.6 524 77.7
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.6e-244 848.6 530 77.5
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 3.4e-244 848.2 530 77.4
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 4.4e-244 847.8 523 77.6
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 5.8e-244 847.4 528 76.7
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 5.8e-244 847.4 536 76.1
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 9.9e-244 846.7 557 74.0
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 9.9e-244 846.7 528 76.9
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.1e-242 843.2 527 76.9
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 3.2e-242 841.6 545 77.2
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 9.3e-242 840.1 482 84.0
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.7e-241 838.6 534 76.2
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 9.6e-239 830.1 531 75.9
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 1.6e-238 829.3 524 76.5
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 6.2e-238 827.4 536 75.6
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 9.0e-237 823.5 525 78.1
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 9.9e-236 820.1 523 75.7
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.2e-235 818.9 528 75.9
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 6.4e-235 817.4 530 75.1
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.1e-234 816.6 532 75.0
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 2.3e-232 808.9 526 73.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.1e-231 806.6 525 74.3
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 4.3e-231 804.7 525 73.9
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 7.4e-231 803.9 535 74.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 1.2e-228 796.6 539 73.1
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 4.2e-226 788.1 525 73.3
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.6e-225 786.2 542 72.5
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 3.9e-224 781.6 543 70.7
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 5.1e-224 781.2 487 77.6
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 6.7e-224 780.8 530 70.9
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 3.3e-223 778.5 526 72.8
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.6e-222 776.2 531 69.1
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 4.8e-222 774.6 522 71.6
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.1e-221 773.5 528 71.6
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 4.0e-221 771.5 549 70.3
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 4.5e-220 768.1 528 69.3
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.0e-219 766.9 502 72.5
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 2.9e-219 765.4 565 68.3
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 5.5e-218 761.1 528 70.5
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 3.0e-216 755.4 524 70.8
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 6.7e-216 754.2 529 69.0
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.5e-215 753.1 524 71.8
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 2.2e-214 749.2 534 69.3
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 3.7e-214 748.4 524 70.0
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.1e-213 746.9 524 71.4
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 1.8e-213 746.1 524 71.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.8e-213 746.1 533 69.6
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 4.1e-213 745.0 524 69.5
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 9.0e-213 743.8 555 66.8
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 1.3e-211 740.0 482 75.9
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 6.5e-211 737.6 550 68.5
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 2.7e-209 732.3 524 68.9
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 4.6e-209 731.5 524 68.9
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 6.1e-209 731.1 523 69.2
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 1.4e-208 729.9 524 68.7
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.1e-207 726.9 533 68.9
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 3.3e-207 725.3 524 68.1
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 8.2e-206 720.7 524 68.1
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.1e-205 720.3 528 67.8
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 6.9e-205 717.6 604 62.1
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 3.6e-193 678.7 527 66.2
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 2.0e-191 672.9 509 66.2
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 9.1e-189 664.1 530 62.3
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 2.9e-187 659.1 529 63.7
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.8e-187 658.7 539 64.2
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.7e-182 642.1 587 58.1
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 6.1e-177 624.8 538 61.2
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 1.8e-176 623.2 524 56.7
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.7e-175 618.2 526 57.8
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.2e-174 616.3 528 58.7
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.0e-172 609.8 631 53.6
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 6.6e-171 604.7 529 58.8
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 1.4e-168 597.0 522 54.8
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 2.5e-162 576.2 556 56.7
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 8.9e-160 567.8 532 54.7
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 4.6e-148 528.9 301 80.1
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 6.8e-144 515.0 316 75.9
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.3e-139 500.7 525 47.0
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 2.2e-134 483.4 300 73.7
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.7e-132 476.5 301 75.1
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 2.4e-128 463.4 557 50.1
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.9e-125 453.8 446 55.8
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 8.1e-121 438.3 562 46.3
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.7e-113 412.9 244 80.3
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 3.3e-106 389.8 300 66.0
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.0e-95 354.0 638 32.3
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 4.7e-84 316.2 371 48.0
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 2.2e-78 297.4 510 34.9
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 5.7e-74 282.7 207 69.6
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.5e-66 258.1 573 32.6
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 4.8e-65 253.1 204 63.7
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 3.8e-62 243.4 204 61.8
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.1e-61 241.9 202 62.9
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 4.2e-61 240.0 197 58.9
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.6e-60 238.0 202 61.9
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.1e-60 237.7 202 61.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.4e-59 235.0 169 67.5
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 6.3e-49 199.5 104 84.6
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 2.1e-36 157.9 189 49.2
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 2.3e-35 154.5 130 63.1
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.1e-32 145.6 85 75.3
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.6e-31 141.7 324 31.5
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.0e-22 112.5 441 24.9
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.3e-21 107.1 107 57.9
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 1.2e-15 89.0 48 85.4
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 2.1e-12 78.2 56 67.9
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 3.6e-12 77.4 115 45.2
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 1.1e-11 75.9 52 71.2
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 1.5e-10 72.0 51 66.7
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 9.9e-10 69.3 39 76.9
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.4e-08 64.7 31 83.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.4e-08 64.7 31 83.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.4e-08 64.7 31 83.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.4e-08 64.7 31 83.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 7.1e-08 63.2 31 80.6
Actinidia31560 Actinidia chinensis HOM05D006175 ORTHO05D008081 1.0e-06 59.3 76 51.3


User provided reference genes

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