Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006628001 Vitis vinifera HOM05D001149 ORTHO05D000970 2.1e-88 328.9 158 100.0
Dinv13213 Davidia involucrata HOM05D001149 ORTHO05D000970 1.3e-29 133.7 97 69.1
Hma1.2p1_0190F.1_g082940 Hydrangea macrophylla HOM05D001149 ORTHO05D000970 2.7e-27 125.9 96 66.7
CiPaw.04G102600 Carya illinoinensis HOM05D001149 ORTHO05D000970 1.2e-22 110.5 90 63.3
Prupe.6G190800 Prunus persica HOM05D001149 ORTHO05D000970 9.8e-22 107.5 83 66.3
Thecc.01G098100 Theobroma cacao HOM05D001149 ORTHO05D000970 9.8e-22 107.5 89 64.0
Nn5g30064 Nelumbo nucifera HOM05D001149 ORTHO05D000970 1.3e-21 107.1 101 57.4
Nn1g05412 Nelumbo nucifera HOM05D001149 ORTHO05D000970 1.7e-21 106.7 87 62.1
CiPaw.03G143800 Carya illinoinensis HOM05D001149 ORTHO05D000970 1.1e-20 104.0 87 60.9
MD01G1033300 Malus domestica HOM05D001149 ORTHO05D000970 1.4e-20 103.6 83 61.4
Cc07_g14860 Coffea canephora HOM05D001149 ORTHO05D000970 1.9e-20 103.2 84 64.3
TAR625G1361 Trochodendron aralioides HOM05D001149 ORTHO05D000970 1.9e-20 103.2 91 61.5
Medtr3g087020 Medicago truncatula HOM05D001149 ORTHO05D000970 3.2e-20 102.4 87 59.8
DCAR_014212 Daucus carota HOM05D001149 ORTHO05D000970 1.6e-19 100.1 66 68.2
Glyma.08G134100 Glycine max HOM05D001149 ORTHO05D000970 2.7e-19 99.4 91 61.5
Phvul.002G257600 Phaseolus vulgaris HOM05D001149 ORTHO05D000970 2.7e-19 99.4 89 60.7
FAN26G0813 Fragaria x ananassa HOM05D001149 ORTHO05D000970 4.6e-19 98.6 64 71.9
Sc03g0000050 Simmondsia chinensis HOM05D001149 ORTHO05D000970 4.6e-19 98.6 91 60.4
FAN23G1124 Fragaria x ananassa HOM05D001149 ORTHO05D000970 6.0e-19 98.2 64 71.9
FAN28G1489 Fragaria x ananassa HOM05D001149 ORTHO05D000970 6.0e-19 98.2 72 68.1
Psat5g090560 Pisum sativum HOM05D001149 ORTHO05D000970 6.0e-19 98.2 74 63.5
QL06p048536 Quercus lobata HOM05D001149 ORTHO05D000970 7.8e-19 97.8 69 69.6
TPR.G16001 Trifolium pratense HOM05D001149 ORTHO05D000970 1.0e-18 97.4 72 62.5
arahy.Tifrunner.gnm1.ann1.Z3I63Q Arachis hypogaea HOM05D001149 ORTHO05D000970 1.3e-18 97.1 88 58.0
FvH4_1g20560 Fragaria vesca HOM05D001149 ORTHO05D000970 1.3e-18 97.1 81 64.2
FAN19G0956 Fragaria x ananassa HOM05D001149 ORTHO05D000970 1.3e-18 97.1 81 64.2
Actinidia28242 Actinidia chinensis HOM05D001149 ORTHO05D000970 1.7e-18 96.7 92 52.2
Migut.H02347 Erythranthe guttata HOM05D001149 ORTHO05D000970 1.7e-18 96.7 78 61.5
TWI74G0420 Tripterygium wilfordii HOM05D001149 ORTHO05D000970 2.3e-18 96.3 86 59.3
Actinidia28855 Actinidia chinensis HOM05D001149 ORTHO05D000970 3.0e-18 95.9 83 57.8
vmacro18588 Vaccinium macrocarpon HOM05D001149 ORTHO05D000970 3.0e-18 95.9 81 56.8
RcHm_v2.0_Chr2g0112781 Rosa chinensis HOM05D001149 ORTHO05D000970 5.0e-18 95.1 91 57.1
Glyma.18G015900 Glycine max HOM05D001149 ORTHO05D000970 8.6e-18 94.4 93 53.8
Potri.007G095400 Populus trichocarpa HOM05D001149 ORTHO05D000970 1.1e-17 94.0 80 58.8
Lj4g0022683 Lotus japonicus HOM05D001149 ORTHO05D000970 1.5e-17 93.6 104 51.0
Nitab4.5_0012999g0020 Nicotiana tabacum HOM05D001149 ORTHO05D000970 1.5e-17 93.6 80 60.0
Lalb_Chr07g0185261 Lupinus albus HOM05D001149 ORTHO05D000970 1.9e-17 93.2 67 62.7
Duzib264G0507 Durio zibethinus HOM05D001149 ORTHO05D000970 2.5e-17 92.8 88 59.1
Gohir.A11G203600 Gossypium hirsutum HOM05D001149 ORTHO05D000970 2.5e-17 92.8 88 58.0
Lj6g0013605 Lotus japonicus HOM05D001149 ORTHO05D000970 3.3e-17 92.4 83 55.4
Sabra05G0060200 Salix brachista HOM05D001149 ORTHO05D000970 4.3e-17 92.0 78 59.0
MSTRG.2574 Avicennia marina HOM05D001149 ORTHO05D000970 5.6e-17 91.7 79 53.2
Gorai.007G236300 Gossypium raimondii HOM05D001149 ORTHO05D000970 5.6e-17 91.7 88 56.8
SalBow3G1625 Salvia bowleyana HOM05D001149 ORTHO05D000970 5.6e-17 91.7 84 56.0
Gohir.D11G220000 Gossypium hirsutum HOM05D001149 ORTHO05D000970 7.3e-17 91.3 80 60.0
Potri.005G073700 Populus trichocarpa HOM05D001149 ORTHO05D000970 7.3e-17 91.3 85 52.9
Duzib187G1316 Durio zibethinus HOM05D001149 ORTHO05D000970 9.5e-17 90.9 118 49.2
Rhsim08G0012500 Rhododendron simsii HOM05D001149 ORTHO05D000970 1.2e-16 90.5 82 54.9
HanXRQChr15g0469381 Helianthus annuus HOM05D001149 ORTHO05D000970 1.6e-16 90.1 98 48.0
Sabra07G0078600 Salix brachista HOM05D001149 ORTHO05D000970 2.1e-16 89.7 83 57.8
Glyma.11G241100 Glycine max HOM05D001149 ORTHO05D000970 8.1e-16 87.8 67 59.7
Peaxi162Scf00295g01127 Petunia axillaris HOM05D001149 ORTHO05D000970 8.1e-16 87.8 79 58.2
Aqoxy6G00752 Aquilegia oxysepala HOM05D001149 ORTHO05D000970 1.1e-15 87.4 85 52.9
Cpa.g.sc55.91 Carica papaya HOM05D001149 ORTHO05D000970 1.1e-15 87.4 83 59.0
ClCG01G018670 Citrullus lanatus HOM05D001149 ORTHO05D000970 1.8e-15 86.7 79 50.6
Manes.12G132000 Manihot esculenta HOM05D001149 ORTHO05D000970 2.3e-15 86.3 40 92.5
CAN.G151.17 Capsicum annuum HOM05D001149 ORTHO05D000970 4.0e-15 85.5 84 53.6
Medtr8g090010 Medicago truncatula HOM05D001149 ORTHO05D000970 4.0e-15 85.5 54 72.2
Solyc11g009040.3 Solanum lycopersicum HOM05D001149 ORTHO05D000970 4.0e-15 85.5 83 53.0
MBI02_g02170_MAGBIO Magnolia biondii HOM05D001149 ORTHO05D000970 6.8e-15 84.7 85 55.3
MD15G1322000 Malus domestica HOM05D001149 ORTHO05D000970 6.8e-15 84.7 89 53.9
TPR.G6240 Trifolium pratense HOM05D001149 ORTHO05D000970 6.8e-15 84.7 80 52.5
TWI53G1981 Tripterygium wilfordii HOM05D001149 ORTHO05D000970 6.8e-15 84.7 75 58.7
TWI77G0463 Tripterygium wilfordii HOM05D001149 ORTHO05D000970 6.8e-15 84.7 83 55.4
Lsat_1_v5_gn_5_34461 Lactuca sativa HOM05D001149 ORTHO05D000970 8.9e-15 84.3 78 53.8
Glyma.05G176700 Glycine max HOM05D001149 ORTHO05D000970 1.2e-14 84.0 67 62.7
Gohir.D03G039300 Gossypium hirsutum HOM05D001149 ORTHO05D000970 1.2e-14 84.0 75 60.0
Ciclev10027218m.g Citrus clementina HOM05D001149 ORTHO05D000970 2.6e-14 82.8 83 55.4
Eucgr.H04752 Eucalyptus grandis HOM05D001149 ORTHO05D000970 2.6e-14 82.8 92 54.3
Hund13602 Selenicereus undatus HOM05D001149 ORTHO05D000970 2.6e-14 82.8 74 56.8
VMungo1383G0952 Vigna mungo HOM05D001149 ORTHO05D000970 2.6e-14 82.8 72 55.6
Migut.L00146 Erythranthe guttata HOM05D001149 ORTHO05D000970 3.4e-14 82.4 78 48.7
VMungo0251G3393 Vigna mungo HOM05D001149 ORTHO05D000970 3.4e-14 82.4 80 55.0
CsaV3_6G045330 Cucumis sativus L. HOM05D001149 ORTHO05D000970 4.4e-14 82.0 44 75.0
Gorai.003G040500 Gossypium raimondii HOM05D001149 ORTHO05D000970 4.4e-14 82.0 75 58.7
Aa31LG3G16840 Aethionema arabicum HOM05D001149 ORTHO05D000970 5.8e-14 81.6 78 56.4
Manes.13G095400 Manihot esculenta HOM05D001149 ORTHO05D000970 5.8e-14 81.6 53 71.7
MELO3C007746.2 Cucumis melo HOM05D001149 ORTHO05D000970 7.5e-14 81.3 78 52.6
Sed0017228 Sechium edule HOM05D001149 ORTHO05D000970 7.5e-14 81.3 81 53.1
Carub.0006s0877 Capsella rubella HOM05D001149 ORTHO05D000970 9.8e-14 80.9 62 62.9
PGSC0003DMG400016799 Solanum tuberosum HOM05D001149 ORTHO05D000970 9.8e-14 80.9 87 48.3
Gohir.A02G128600 Gossypium hirsutum HOM05D001149 ORTHO05D000970 1.7e-13 80.1 75 57.3
CSS0028693 Camellia sinensis var. sinensis HOM05D001149 ORTHO05D000970 2.2e-13 79.7 36 91.7
AT5G10310 Arabidopsis thaliana HOM05D001149 ORTHO05D000970 6.4e-13 78.2 70 55.7
Sed0000325 Sechium edule HOM05D001149 ORTHO05D000970 6.4e-13 78.2 58 62.1
Ca_17752_v3 Cicer arietinum L. HOM05D001149 ORTHO05D000970 8.3e-13 77.8 79 50.6
PSO541G2242 Papaver somniferum HOM05D001149 ORTHO05D000970 1.1e-12 77.4 77 51.9
AL6G20810 Arabidopsis lyrata HOM05D001149 ORTHO05D000970 1.4e-12 77.0 73 52.1
BcaB05g21475 Brassica carinata HOM05D001149 ORTHO05D000970 1.4e-12 77.0 70 50.0
Thhalv10015039m.g Eutrema salsugineum HOM05D001149 ORTHO05D000970 1.9e-12 76.6 74 50.0
THA.LOC104798884 Tarenaya hassleriana HOM05D001149 ORTHO05D000970 1.9e-12 76.6 40 80.0
SGA_v2.0_scaffold115G32182 Striga asiatica HOM05D001149 ORTHO05D000970 2.4e-12 76.3 69 58.0
SalBow5G5405 Salvia bowleyana HOM05D001149 ORTHO05D000970 3.2e-12 75.9 72 58.3
Lalb_Chr12g0203921 Lupinus albus HOM05D001149 ORTHO05D000970 9.2e-12 74.3 37 78.4
ATR0782G101 Amborella trichopoda HOM05D001149 ORTHO05D000970 1.2e-11 73.9 88 48.9
CARHR202990 Cardamine hirsuta HOM05D001149 ORTHO05D000970 1.2e-11 73.9 46 65.2
SGA_v2.0_scaffold111G31505 Striga asiatica HOM05D001149 ORTHO05D000970 1.2e-11 73.9 33 87.9
THA.LOC104801672 Tarenaya hassleriana HOM05D001149 ORTHO05D000970 2.1e-11 73.2 34 82.4
MBI05_g34725_MAGBIO Magnolia biondii HOM05D001149 ORTHO05D000970 2.7e-11 72.8 66 53.0
Rhsim10G0164800 Rhododendron simsii HOM05D000027 ORTHO05D000066 2.7e-11 72.8 35 82.9
PSO781G0026 Papaver somniferum HOM05D001149 ORTHO05D000970 3.5e-11 72.4 78 47.4
unitig_736.g22574 Utricularia gibba HOM05D001149 ORTHO05D000970 3.5e-11 72.4 32 90.6
BcaB08g37119 Brassica carinata HOM05D001149 ORTHO05D000970 4.6e-11 72.0 72 51.4
C09p67080 Brassica napus HOM05D001149 ORTHO05D000970 4.6e-11 72.0 79 44.3
Sp6g33120 Schrenkiella parvula HOM05D001149 ORTHO05D000970 4.6e-11 72.0 75 49.3
Hund16301 Selenicereus undatus HOM05D001149 ORTHO05D000970 4.6e-11 72.0 38 78.9
PGSC0003DMG400016161 Solanum tuberosum HOM05D001149 ORTHO05D000970 4.6e-11 72.0 34 85.3
unitig_899.g14548 Utricularia gibba HOM05D001149 ORTHO05D000970 4.6e-11 72.0 40 75.0
A10p27270 Brassica napus HOM05D001149 ORTHO05D000970 6.0e-11 71.6 73 50.7
unitig_736.g22350 Utricularia gibba HOM05D001149 ORTHO05D000970 1.0e-10 70.9 38 73.7
BraA10t44777Z Brassica rapa HOM05D001149 ORTHO05D000970 1.3e-10 70.5 75 46.7
A02p00430 Brassica napus HOM05D001149 ORTHO05D000970 1.7e-10 70.1 74 52.7
BcaC04g19313 Brassica carinata HOM05D001149 ORTHO05D000970 2.3e-10 69.7 79 43.0
BolC9t59481H Brassica oleracea HOM05D001149 ORTHO05D000970 2.3e-10 69.7 79 43.0
Sopen11g004810 Solanum pennellii HOM05D001149 ORTHO05D000970 3.9e-10 68.9 33 84.8
PGR102G2054 Punica granatum HOM05D001149 ORTHO05D000970 5.1e-10 68.6 35 80.0
Phvul.001G253101 Phaseolus vulgaris HOM05D001149 ORTHO05D000970 1.1e-09 67.4 32 81.2
BraA02t05027Z Brassica rapa HOM05D001149 ORTHO05D000970 1.5e-09 67.0 74 47.3
C02p04370 Brassica napus HOM05D001149 ORTHO05D000970 1.9e-09 66.6 74 51.4
BcaB05g21473 Brassica carinata HOM05D001149 ORTHO05D000970 4.3e-09 65.5 74 50.0
BcaB05g21474 Brassica carinata HOM05D001149 ORTHO05D000970 4.3e-09 65.5 74 50.0
BcaB05g21478 Brassica carinata HOM05D001149 ORTHO05D000970 4.3e-09 65.5 74 50.0
BcaC03g13306 Brassica carinata HOM05D001149 ORTHO05D000970 4.3e-09 65.5 74 50.0
HPP92_011218 Vanilla planifolia HOM05D001149 ORTHO05D000970 4.3e-09 65.5 73 50.7
BolC2t06401H Brassica oleracea HOM05D001149 ORTHO05D000970 4.7e-08 62.0 71 46.5
PGR031G3721 Punica granatum HOM05D001149 ORTHO05D000970 6.2e-08 61.6 32 81.2
Os08g0485500 Oryza sativa ssp. japonica HOM05D001149 ORTHO05D000970 1.8e-07 60.1 46 58.7
HPP92_004282 Vanilla planifolia HOM05D001149 ORTHO05D000970 3.1e-07 59.3 74 47.3
Solyc05g051545.1 Solanum lycopersicum HOM05D001149 ORTHO05D000970 4.0e-07 58.9 37 64.9
Sopen05g029990 Solanum pennellii HOM05D001149 ORTHO05D000970 4.0e-07 58.9 37 64.9
Zm00001eb194040 Zea mays HOM05D001149 ORTHO05D000970 6.8e-07 58.2 61 45.9
unitig_0.g1888 Utricularia gibba HOM05D003287 ORTHO05D003688 2.6e-06 56.2 40 57.5
Lj3g0000405 Lotus japonicus HOM05D002096 ORTHO05D002203 3.4e-06 55.8 88 30.7
HPP92_016359 Vanilla planifolia HOM05D001149 ORTHO05D000970 4.4e-06 55.5 40 62.5
MD13G1199400 Malus domestica HOM05D002122 ORTHO05D002205 7.6e-06 54.7 81 40.7
Zm00001eb255380 Zea mays HOM05D001149 ORTHO05D000970 7.6e-06 54.7 57 47.4


User provided reference genes

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