Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 3.9e-154 548.1 282 100.0
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 2.2e-133 479.2 264 89.8
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.9e-132 476.1 266 89.1
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 4.6e-131 471.5 266 88.0
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 1.8e-130 469.5 266 87.6
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 5.1e-130 468.0 266 86.5
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 5.1e-130 468.0 266 86.5
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 8.7e-130 467.2 266 88.3
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 8.7e-130 467.2 266 87.2
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 3.3e-129 465.3 266 85.7
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 3.3e-129 465.3 266 88.0
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.3e-129 465.3 266 85.3
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 7.4e-129 464.2 266 86.5
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 4.8e-128 461.5 266 86.1
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 1.8e-127 459.5 264 85.2
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 3.1e-127 458.8 266 86.1
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 5.3e-127 458.0 266 85.3
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 9.0e-127 457.2 266 83.8
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.0e-127 457.2 266 84.6
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 2.6e-126 455.7 266 85.3
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.6e-126 455.7 266 84.6
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.6e-126 455.7 266 84.6
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 2.6e-126 455.7 267 82.8
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.0e-125 453.8 266 85.7
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.0e-125 453.8 266 85.3
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 1.0e-125 453.8 266 84.6
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.3e-125 453.4 266 84.2
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 2.9e-125 452.2 266 84.2
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 8.4e-125 450.7 266 83.8
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 1.4e-124 449.9 266 84.6
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.4e-124 449.9 264 84.5
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 7.1e-124 447.6 266 80.8
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.2e-123 446.8 253 87.0
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 1.6e-123 446.4 266 80.5
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 2.1e-123 446.0 266 84.2
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 6.1e-123 444.5 266 82.7
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 7.9e-123 444.1 266 83.1
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.0e-122 443.7 266 82.3
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.3e-122 443.4 266 82.7
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 2.3e-122 442.6 265 82.3
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 2.3e-122 442.6 266 81.2
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 3.0e-122 442.2 266 80.5
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 3.9e-122 441.8 266 81.2
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 3.9e-122 441.8 265 82.3
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 5.1e-122 441.4 266 82.3
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 5.1e-122 441.4 266 81.2
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 5.1e-122 441.4 270 83.3
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 6.7e-122 441.0 266 80.8
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 6.7e-122 441.0 264 83.7
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 8.7e-122 440.7 285 80.7
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 8.7e-122 440.7 266 82.0
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 8.7e-122 440.7 264 83.3
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 1.9e-121 439.5 266 81.6
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 2.5e-121 439.1 266 81.6
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.5e-121 439.1 266 83.8
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 3.3e-121 438.7 266 80.8
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 3.3e-121 438.7 267 81.6
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 4.3e-121 438.3 266 78.9
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 5.7e-121 438.0 266 80.8
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 9.7e-121 437.2 266 81.6
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 9.7e-121 437.2 266 80.8
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 1.3e-120 436.8 266 81.6
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.3e-120 436.8 266 83.1
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 1.6e-120 436.4 277 76.9
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 1.6e-120 436.4 264 82.2
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.2e-120 436.0 273 80.6
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 2.8e-120 435.6 274 80.7
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 4.8e-120 434.9 266 80.8
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 8.2e-120 434.1 266 81.6
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 8.2e-120 434.1 270 80.7
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.4e-119 433.3 266 80.5
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 1.8e-119 433.0 266 78.2
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 9.0e-119 430.6 262 82.1
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.2e-118 430.3 294 75.9
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.0e-118 429.5 267 81.6
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.4e-118 428.7 272 80.5
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 4.5e-118 428.3 269 78.1
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 5.9e-118 427.9 266 79.3
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 2.9e-117 425.6 266 78.2
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 5.5e-116 421.4 267 79.4
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 3.6e-115 418.7 239 84.1
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 3.6e-115 418.7 266 77.4
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 2.3e-114 416.0 266 77.8
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 3.9e-114 415.2 266 76.7
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 5.1e-114 414.8 266 78.2
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.5e-113 413.3 267 77.5
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 1.5e-113 413.3 325 67.7
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 2.5e-113 412.5 266 78.6
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.7e-112 409.8 267 76.4
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 4.8e-112 408.3 268 77.2
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 8.2e-112 407.5 297 71.4
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.4e-111 406.8 267 76.4
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 1.8e-111 406.4 265 76.2
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.8e-111 406.4 267 76.4
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.2e-110 403.7 266 77.1
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 2.0e-110 402.9 267 76.8
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 5.9e-110 401.4 270 75.6
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 5.9e-110 401.4 270 75.6
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 7.7e-110 401.0 270 75.9
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 7.7e-110 401.0 267 75.3
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.3e-109 400.2 267 75.7
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 5.0e-109 398.3 270 74.8
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 5.0e-109 398.3 270 74.4
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 6.5e-109 397.9 267 77.2
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 1.1e-108 397.1 266 77.4
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.9e-108 396.4 270 72.6
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 5.5e-108 394.8 266 75.9
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 7.2e-108 394.4 266 75.2
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 9.4e-108 394.0 270 74.4
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 1.2e-107 393.7 270 74.4
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.6e-107 393.3 270 73.3
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 2.7e-107 392.5 270 74.4
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 2.7e-107 392.5 270 74.1
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 4.7e-107 391.7 270 74.1
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 1.0e-106 390.6 265 74.3
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.0e-106 390.6 268 75.0
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 1.8e-106 389.8 270 74.1
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 1.5e-105 386.7 266 75.2
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 2.0e-105 386.3 231 83.5
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 3.3e-105 385.6 309 65.0
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.3e-104 381.3 265 71.3
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 6.3e-104 381.3 266 70.3
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 6.3e-104 381.3 266 70.3
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 8.2e-104 380.9 260 74.2
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.6e-102 375.9 270 69.3
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.5e-102 375.6 272 72.4
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.5e-100 370.2 266 72.9
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.5e-100 370.2 266 72.9
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 5.5e-100 368.2 231 77.9
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.6e-99 366.7 290 65.9
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 3.6e-99 365.5 266 72.2
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 8.0e-99 364.4 271 70.1
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 3.3e-97 359.0 267 71.9
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 6.3e-96 354.8 234 75.6
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.3e-93 347.1 250 69.2
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 3.2e-92 342.4 242 75.2
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 2.1e-91 339.7 325 59.4
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 4.7e-91 338.6 267 61.8
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 2.3e-90 336.3 197 82.7
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 3.0e-90 335.9 197 81.7
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 8.8e-90 334.3 263 65.8
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 3.7e-88 328.9 266 62.0
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 4.1e-87 325.5 207 76.3
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 5.9e-86 321.6 249 69.5
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 1.4e-79 300.4 239 65.7
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.4e-74 283.9 259 61.0
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 3.0e-74 282.7 261 57.1
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 6.4e-64 248.4 197 58.9
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.4e-57 226.1 280 52.1
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.2e-55 219.5 327 46.2
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.3e-53 214.2 209 63.6
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 1.1e-50 204.5 120 78.3
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 6.4e-48 195.3 157 59.2
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 1.9e-47 193.7 157 59.9
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 2.4e-47 193.4 285 43.5
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 3.0e-45 186.4 156 62.2
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 6.6e-45 185.3 122 75.4
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 7.3e-36 155.2 155 54.2
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 4.0e-34 149.4 86 81.4
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.6e-30 137.5 279 40.1
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 1.1e-28 131.3 277 39.0
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 4.8e-27 125.9 235 32.8
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.5e-25 120.9 120 53.3
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.9e-23 114.0 164 45.7
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 7.9e-22 108.6 66 84.8
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.3e-21 107.8 118 52.5
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.8e-21 107.5 94 58.5
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.9e-12 77.4 47 83.0
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.3e-08 64.7 56 58.9
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.5e-08 62.4 49 63.3


User provided reference genes

Program Settings