Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.2e-74 283.1 140 100.0
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 3.5e-39 165.2 136 62.5
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 2.3e-38 162.5 139 62.6
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 8.7e-38 160.6 143 60.8
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 8.7e-38 160.6 117 71.8
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.5e-37 159.8 142 61.3
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 1.5e-37 159.8 129 63.6
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.9e-37 159.5 138 61.6
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.9e-37 159.5 142 61.3
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 4.3e-37 158.3 134 61.9
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 1.3e-36 156.8 139 61.2
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 2.1e-36 156.0 142 62.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 2.8e-36 155.6 135 60.0
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 4.8e-36 154.8 132 60.6
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 6.2e-36 154.5 142 61.3
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.1e-35 153.7 132 59.8
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 1.8e-35 152.9 140 59.3
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 1.8e-35 152.9 140 59.3
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.0e-35 151.8 141 61.0
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 6.9e-35 151.0 141 59.6
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 6.9e-35 151.0 143 59.4
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 6.9e-35 151.0 138 60.9
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-34 150.2 138 57.2
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.5e-34 149.8 136 61.0
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 1.5e-34 149.8 159 52.8
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 4.5e-34 148.3 142 57.7
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 5.8e-34 147.9 135 58.5
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.8e-34 147.9 136 60.3
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 5.8e-34 147.9 161 52.8
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 5.8e-34 147.9 140 60.0
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 5.8e-34 147.9 131 60.3
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 9.9e-34 147.1 118 62.7
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.3e-33 146.7 136 58.1
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 2.9e-33 145.6 137 58.4
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 3.8e-33 145.2 142 57.0
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 3.8e-33 145.2 137 57.7
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 3.8e-33 145.2 140 57.9
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 6.4e-33 144.4 140 57.1
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 8.4e-33 144.1 140 57.9
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.4e-32 143.3 140 56.4
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 1.4e-32 143.3 133 55.6
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.9e-32 142.9 150 54.0
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 2.4e-32 142.5 111 63.1
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 2.4e-32 142.5 142 57.0
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 4.2e-32 141.7 150 51.3
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.2e-32 141.7 133 56.4
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 9.3e-32 140.6 136 59.6
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.6e-31 139.8 139 55.4
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 1.6e-31 139.8 136 53.7
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 2.1e-31 139.4 140 57.9
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.7e-31 139.0 125 58.4
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 4.6e-31 138.3 139 54.7
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 7.9e-31 137.5 143 55.9
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 7.9e-31 137.5 125 60.0
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 1.3e-30 136.7 139 56.1
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 2.3e-30 136.0 143 55.2
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.3e-30 136.0 140 54.3
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 3.0e-30 135.6 143 54.5
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 3.0e-30 135.6 143 54.5
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 3.9e-30 135.2 142 55.6
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 5.1e-30 134.8 136 53.7
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 6.7e-30 134.4 144 54.9
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 8.7e-30 134.0 135 52.6
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.5e-29 133.3 139 54.7
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.5e-29 132.5 139 54.0
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.5e-29 132.5 139 54.0
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 2.5e-29 132.5 131 55.0
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 3.3e-29 132.1 125 57.6
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.3e-29 131.7 130 55.4
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 5.6e-29 131.3 140 54.3
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 5.6e-29 131.3 140 54.3
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 7.4e-29 131.0 137 56.9
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 9.6e-29 130.6 141 53.2
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 9.6e-29 130.6 136 54.4
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 9.6e-29 130.6 139 54.0
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 1.3e-28 130.2 140 53.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 1.3e-28 130.2 141 52.5
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.3e-28 130.2 115 59.1
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.6e-28 129.8 125 57.6
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 6.2e-28 127.9 78 74.4
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 2.4e-27 125.9 143 50.3
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 2.4e-27 125.9 99 60.6
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 4.0e-27 125.2 147 52.4
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 5.3e-27 124.8 90 67.8
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 6.9e-27 124.4 77 68.8
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 9.0e-27 124.0 141 51.8
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 2.6e-26 122.5 127 53.5
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 7.6e-26 120.9 124 54.0
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.3e-25 120.2 142 50.7
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 1.7e-25 119.8 145 48.3
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 6.4e-25 117.9 132 52.3
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.4e-24 116.7 122 54.1
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 4.2e-24 115.2 122 54.1
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 4.2e-24 115.2 141 46.8
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 5.5e-24 114.8 143 48.3
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 1.2e-23 113.6 138 50.7
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 1.6e-23 113.2 144 49.3
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 2.1e-23 112.8 136 50.7
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 2.7e-23 112.5 112 54.5
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 4.6e-23 111.7 94 60.6
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 1.0e-22 110.5 118 55.9
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.3e-22 110.2 133 48.1
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.3e-22 110.2 77 63.6
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.8e-22 109.8 102 57.8
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 3.9e-22 108.6 141 48.2
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 6.7e-22 107.8 144 46.5
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 1.5e-21 106.7 118 54.2
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 1.5e-21 106.7 135 45.2
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.3e-21 105.5 85 57.6
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 4.3e-21 105.1 120 46.7
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 4.3e-21 105.1 106 50.0
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 7.4e-21 104.4 77 62.3
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 1.6e-20 103.2 68 67.6
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 1.6e-20 103.2 138 43.5
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 2.8e-20 102.4 110 50.9
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 2.1e-15 86.3 107 46.7
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 1.0e-14 84.0 87 46.0
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 1.3e-14 83.6 70 55.7
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 3.9e-14 82.0 82 46.3
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 8.7e-14 80.9 119 48.7
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.1e-13 80.5 126 42.9
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 3.3e-13 79.0 76 50.0
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 1.8e-11 73.2 74 50.0
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 1.5e-10 70.1 107 45.8
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 2.6e-10 69.3 119 40.3
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.3e-09 67.0 74 45.9
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 3.8e-09 65.5 126 41.3
Atru.chr1.3017 Acer truncatum HOM05D006427 ORTHO05D008147 7.2e-08 61.2 93 46.2
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 7.9e-07 57.8 96 39.6


User provided reference genes

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