Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002603001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.1e-19 97.4 48 100.0
GSVIVG01003488001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.1e-19 97.4 48 100.0
GSVIVG01021859001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.1e-19 97.4 48 100.0
GSVIVG01029110001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.1e-19 97.4 48 100.0
vmacro16726 Vaccinium macrocarpon HOM05D000276 ORTHO05D003855 2.1e-15 84.7 45 91.1
Gorai.011G048700 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.3e-14 81.3 40 97.5
Cc04_g13010 Coffea canephora HOM05D000276 ORTHO05D003855 3.0e-14 80.9 41 95.1
Cc07_g05020 Coffea canephora HOM05D000276 ORTHO05D003855 3.0e-14 80.9 41 95.1
Dinv42484 Davidia involucrata HOM05D000276 ORTHO05D003855 3.9e-14 80.5 39 100.0
GSVIVG01012066001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.9e-14 80.5 39 100.0
Cfa000708 Carpinus fangiana HOM05D000276 ORTHO05D003855 8.7e-14 79.3 39 97.4
MBI06_g27515_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D003855 8.7e-14 79.3 40 95.0
Ah.10g035160 Amaranthus hybridus HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Ah.16g105330 Amaranthus hybridus HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
EL10Ac9g22468 Beta vulgaris HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Dinv19593 Davidia involucrata HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Gohir.A10G044600 Gossypium hirsutum HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Gohir.D10G045800 Gossypium hirsutum HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Hund26663 Selenicereus undatus HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
HPP92_021535 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
HPP92_021548 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.1e-13 79.0 39 97.4
Hund12476 Selenicereus undatus HOM05D000276 ORTHO05D003855 1.5e-13 78.6 39 94.9
SEGI_04968 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 1.5e-13 78.6 39 94.9
Gohir.A12G073000 Gossypium hirsutum HOM05D000276 ORTHO05D003855 1.9e-13 78.2 40 92.5
Oeu043725.1 Olea europaea HOM05D000276 ORTHO05D003855 1.9e-13 78.2 44 84.1
QL04p081873 Quercus lobata HOM05D000276 ORTHO05D003855 1.9e-13 78.2 39 94.9
SEGI_13363 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 1.9e-13 78.2 39 92.3
CSS0029046 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
ClCG01G009520 Citrullus lanatus HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
MELO3C021745.2 Cucumis melo HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Gohir.A05G145700 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Gohir.A11G253500 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Gohir.D05G148100 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Gorai.009G152300 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
MD05G1251300 Malus domestica HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
MD10G1231800 Malus domestica HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Manes.06G175300 Manihot esculenta HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Oeu027721.1 Olea europaea HOM05D001395 ORTHO05D003855 2.5e-13 77.8 44 84.1
Prupe.4G112500 Prunus persica HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Prupe.4G136000 Prunus persica HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Sed0005548 Sechium edule HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 2.5e-13 77.8 39 94.9
Thecc.06G143200 Theobroma cacao HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
TWI38G2183 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 2.5e-13 77.8 39 94.9
Aqoxy3G04299 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 3.3e-13 77.4 39 94.9
CSS0035611 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 3.3e-13 77.4 39 92.3
Actinidia36817 Actinidia chinensis HOM05D000276 ORTHO05D003855 4.3e-13 77.0 39 94.9
Hma1.2p1_1208F.1_g267120 Hydrangea macrophylla HOM05D000276 ORTHO05D003855 4.3e-13 77.0 39 92.3
Nn4g24843 Nelumbo nucifera HOM05D000276 ORTHO05D003855 4.3e-13 77.0 39 94.9
Solyc07g055080.3 Solanum lycopersicum HOM05D000276 ORTHO05D003855 5.6e-13 76.6 39 94.9
Sopen07g027130 Solanum pennellii HOM05D000276 ORTHO05D003855 5.6e-13 76.6 39 94.9
PGSC0003DMG400020441 Solanum tuberosum HOM05D000276 ORTHO05D003855 5.6e-13 76.6 39 94.9
Ah.11g040490 Amaranthus hybridus HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Aqoxy2G04019 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 94.9
arahy.Tifrunner.gnm1.ann1.A3R4VN Arachis hypogaea HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
arahy.Tifrunner.gnm1.ann1.J6931G Arachis hypogaea HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
arahy.Tifrunner.gnm1.ann1.N85E68 Arachis hypogaea HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
arahy.Tifrunner.gnm1.ann1.X4HZ2T Arachis hypogaea HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Eucgr.F04120 Eucalyptus grandis HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Lj1g0005035 Lotus japonicus HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Medtr0167s0060 Medicago truncatula HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Peaxi162Scf00241g00079 Petunia axillaris HOM05D000276 ORTHO05D003855 7.4e-13 76.3 44 81.8
Psat1g013600 Pisum sativum HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
Sabra15G0138500 Salix brachista HOM05D000276 ORTHO05D003855 7.4e-13 76.3 42 85.7
Sc24g0002720 Simmondsia chinensis HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
TWI63G1717 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 7.4e-13 76.3 39 92.3
CANSAT78G1531 Cannabis sativa HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Cpa.g.sc81.7 Carica papaya HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Duzib235G1056 Durio zibethinus HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Glyma.08G167600 Glycine max HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Lalb_Chr01g0015471 Lupinus albus HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Lalb_Chr25g0284731 Lupinus albus HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
MD05G1224600 Malus domestica HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
MD10G1206300 Malus domestica HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Manes.14G010700 Manihot esculenta HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
Phvul.005G059300 Phaseolus vulgaris HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
TPR.G33827 Trifolium pratense HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 92.3
HPP92_021539 Vanilla planifolia HOM05D000276 ORTHO05D003855 9.6e-13 75.9 39 94.9
CiPaw.09G076900 Carya illinoinensis HOM05D000276 ORTHO05D003855 1.3e-12 75.5 39 92.3
CDE04G0605 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 1.3e-12 75.5 39 92.3
CDE07G0648 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 1.3e-12 75.5 39 92.3
Ca_03602_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 1.3e-12 75.5 42 85.7
Ca_27312_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 1.3e-12 75.5 42 85.7
Ca_30351_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 1.3e-12 75.5 44 81.8
Lj3g0027077 Lotus japonicus HOM05D000276 ORTHO05D003855 1.3e-12 75.5 39 89.7
CAN.G1736.4 Capsicum annuum HOM05D000276 ORTHO05D003855 1.6e-12 75.1 39 92.3
PSO017G4929 Papaver somniferum HOM05D000276 ORTHO05D003855 1.6e-12 75.1 39 92.3
Glyma.01G105500 Glycine max HOM05D000276 ORTHO05D003855 2.1e-12 74.7 39 89.7
Glyma.15G260000 Glycine max HOM05D000276 ORTHO05D003855 2.1e-12 74.7 39 89.7
Potri.012G123550 Populus trichocarpa HOM05D000276 ORTHO05D003855 2.8e-12 74.3 39 89.7
Potri.015G122400 Populus trichocarpa HOM05D000276 ORTHO05D003855 2.8e-12 74.3 39 89.7
Ca_22480_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 3.7e-12 73.9 38 92.1
COL.COLO4_30995 Corchorus olitorius HOM05D000276 ORTHO05D003855 3.7e-12 73.9 39 89.7
PSO478G2087 Papaver somniferum HOM05D000276 ORTHO05D003855 3.7e-12 73.9 39 89.7
Peaxi162Scf00469g00315 Petunia axillaris HOM05D000276 ORTHO05D003855 3.7e-12 73.9 39 89.7
Lj1A1145T21 Lonicera japonica HOM05D000276 ORTHO05D003855 4.8e-12 73.6 39 89.7
unitig_8.g4751 Utricularia gibba HOM05D000276 ORTHO05D003855 4.8e-12 73.6 39 87.2
VMungo0464G0273 Vigna mungo HOM05D000276 ORTHO05D003855 4.8e-12 73.6 39 89.7
AagrBONN_evm.TU.Sc2ySwM_117.328 Anthoceros agrestis HOM05D000276 ORTHO05D003855 6.2e-12 73.2 39 87.2
CiPaw.10G064400 Carya illinoinensis HOM05D000276 ORTHO05D003855 6.2e-12 73.2 39 87.2
MSTRG.13078 Avicennia marina HOM05D000276 ORTHO05D003855 8.1e-12 72.8 39 87.2
Migut.M01532 Erythranthe guttata HOM05D000276 ORTHO05D003855 8.1e-12 72.8 39 87.2
Glyma.03G073300 Glycine max HOM05D000276 ORTHO05D003855 8.1e-12 72.8 39 87.2
SalBow8G5180 Salvia bowleyana HOM05D000276 ORTHO05D003855 8.1e-12 72.8 39 87.2
SMO203G0023 Selaginella moellendorffii HOM05D000276 ORTHO05D003855 8.1e-12 72.8 39 84.6
Aqoxy2G01703 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 1.1e-11 72.4 38 89.5
AT1G79210 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 1.1e-11 72.4 39 87.2
Migut.H01673 Erythranthe guttata HOM05D000276 ORTHO05D003855 1.1e-11 72.4 39 87.2
Nitab4.5_0001095g0050 Nicotiana tabacum HOM05D000276 ORTHO05D003855 1.1e-11 72.4 39 87.2
Solyc10g008010.4 Solanum lycopersicum HOM05D000276 ORTHO05D003855 1.4e-11 72.0 39 87.2
Sopen10g003880 Solanum pennellii HOM05D000276 ORTHO05D003855 1.4e-11 72.0 39 87.2
PGSC0003DMG400010543 Solanum tuberosum HOM05D000276 ORTHO05D003855 1.4e-11 72.0 39 87.2
unitig_578.g16332 Utricularia gibba HOM05D000276 ORTHO05D003855 1.4e-11 72.0 39 84.6
ECA236G0294 Erigeron canadensis HOM05D000276 ORTHO05D003855 1.8e-11 71.6 39 84.6
PSO063G5488 Papaver somniferum HOM05D000276 ORTHO05D003855 1.8e-11 71.6 39 84.6
PSO782G0714 Papaver somniferum HOM05D000276 ORTHO05D003855 1.8e-11 71.6 39 84.6
RcHm_v2.0_Chr5g0020171 Rosa chinensis HOM05D000276 ORTHO05D003855 1.8e-11 71.6 40 85.0
SGA_v2.0_scaffold31G12584 Striga asiatica HOM05D000276 ORTHO05D003855 1.8e-11 71.6 39 84.6
MSTRG.14567 Avicennia marina HOM05D000276 ORTHO05D003855 2.4e-11 71.2 39 84.6
Ciclev10005774m.g Citrus clementina HOM05D000276 ORTHO05D003855 2.4e-11 71.2 39 87.2
Hma1.2p1_1208F.1_g267140 Hydrangea macrophylla HOM05D000276 ORTHO05D003855 2.4e-11 71.2 39 84.6
Lsat_1_v5_gn_0_9221 Lactuca sativa HOM05D000276 ORTHO05D003855 2.4e-11 71.2 39 89.7
Mapoly0004s0033 Marchantia polymorpha HOM05D000276 ORTHO05D003855 2.4e-11 71.2 39 84.6
Aa31LG4G1800 Aethionema arabicum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Aa31LG7G1010 Aethionema arabicum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
AL1G28620 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
AL2G39680 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
AT1G16470 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaB02g07205 Brassica carinata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaB02g08674 Brassica carinata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaB05g25179 Brassica carinata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaC03g15875 Brassica carinata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaC08g47486 Brassica carinata HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
A02p22670 Brassica napus HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
A07p27240 Brassica napus HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
A07p44330 Brassica napus HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
C02p36280 Brassica napus HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
C06p53100 Brassica napus HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BolC2t09642H Brassica oleracea HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BolC6t40327H Brassica oleracea HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BraA02t07268Z Brassica rapa HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BraA07t30368Z Brassica rapa HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BraA07t31941Z Brassica rapa HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Carub.0001s1621 Capsella rubella HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Carub.0002s2608 Capsella rubella HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
CARHR016940 Cardamine hirsuta HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Thhalv10008648m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Nitab4.5_0000822g0090 Nicotiana tabacum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Nitab4.5_0009223g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
PGR102G3129 Punica granatum HOM05D000276 ORTHO05D003855 4.0e-11 70.5 40 90.0
Sp1g14620 Schrenkiella parvula HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
Sp5g34260 Schrenkiella parvula HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
THA.LOC104808130 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
THA.LOC104812363 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 4.0e-11 70.5 39 84.6
BcaC08g45369 Brassica carinata HOM05D000276 ORTHO05D003855 5.3e-11 70.1 39 84.6
C06p30010 Brassica napus HOM05D000276 ORTHO05D003855 5.3e-11 70.1 39 84.6
BolC6t38161H Brassica oleracea HOM05D000276 ORTHO05D003855 5.3e-11 70.1 39 84.6
Nitab4.5_0009892g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 5.3e-11 70.1 39 84.6
CBR_g50356 Chara braunii HOM05D000276 ORTHO05D003855 6.9e-11 69.7 39 82.1
MCO09G299 Micromonas commoda HOM05D000276 ORTHO05D003855 6.9e-11 69.7 39 79.5
HanXRQChr11g0335541 Helianthus annuus HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
SGA_v2.0_scaffold239G44025 Striga asiatica HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb087600 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb185510 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb185540 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb248210 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb248220 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb248230 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Zm00001eb304790 Zea mays HOM05D000276 ORTHO05D003855 9.0e-11 69.3 39 82.1
Os03g0387100 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 1.5e-10 68.6 39 79.5
Lsat_1_v5_gn_7_110320 Lactuca sativa HOM05D000276 ORTHO05D003855 2.0e-10 68.2 39 79.5
Os02g0634900 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 2.0e-10 68.2 39 76.9
FvH4_3g12361 Fragaria vesca HOM05D000276 ORTHO05D003855 4.5e-10 67.0 38 81.6
ATR0618G230 Amborella trichopoda HOM05D000276 ORTHO05D003855 7.6e-10 66.2 41 85.4
Pp3c11_10390 Physcomitrium patens HOM05D000276 ORTHO05D003855 1.3e-09 65.5 39 79.5
Pp3c7_18410 Physcomitrium patens HOM05D000276 ORTHO05D003855 1.3e-09 65.5 39 79.5
DCAR_016836 Daucus carota HOM05D000276 ORTHO05D003855 2.9e-09 64.3 54 64.8
QL04p081826 Quercus lobata HOM05D000276 ORTHO05D003855 8.4e-09 62.8 33 87.9
Cre08.g373250 Chlamydomonas reinhardtii HOM05D000276 ORTHO05D003855 1.4e-08 62.0 37 70.3
PRCOL_00001639 Prasinoderma coloniale HOM05D000276 ORTHO05D003855 2.5e-08 61.2 39 64.1
HanXRQChr02g0037521 Helianthus annuus HOM05D000276 ORTHO05D003855 2.1e-07 58.2 41 73.2
Haze_26533 Corylus avellana HOM05D000276 ORTHO05D003855 7.9e-07 56.2 31 80.6
Sabra13G0112400 Salix brachista HOM05D000276 ORTHO05D000008 1.3e-06 55.5 33 78.8


User provided reference genes

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