Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 4.4e-51 204.5 118 100.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 8.9e-36 153.7 91 71.4
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 2.0e-35 152.5 92 70.7
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.6e-35 152.1 91 72.5
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.4e-35 151.8 84 77.4
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 4.4e-35 151.4 91 71.4
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 5.8e-35 151.0 90 68.9
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 7.6e-35 150.6 86 74.4
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 7.6e-35 150.6 91 72.5
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 9.9e-35 150.2 86 73.3
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.3e-34 149.8 92 71.7
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.3e-34 149.8 92 71.7
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.3e-34 149.8 92 71.7
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.7e-34 149.4 91 70.3
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.8e-34 148.3 92 69.6
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.8e-34 148.3 90 71.1
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 8.4e-34 147.1 83 77.1
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.1e-33 146.7 76 78.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.1e-33 146.7 91 71.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.1e-33 146.7 90 72.2
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.1e-33 146.7 90 72.2
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.1e-33 146.7 90 68.9
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.1e-33 146.7 90 72.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.4e-33 146.4 80 73.8
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.4e-33 146.4 93 71.0
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.9e-33 146.0 93 69.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.9e-33 146.0 99 64.6
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.4e-33 145.6 84 72.6
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.4e-33 145.6 82 74.4
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.4e-33 145.6 93 69.9
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 2.4e-33 145.6 90 70.0
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 2.4e-33 145.6 84 75.0
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.4e-33 145.6 87 70.1
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 3.2e-33 145.2 90 71.1
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 5.4e-33 144.4 90 68.9
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 7.1e-33 144.1 92 70.7
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 7.1e-33 144.1 91 70.3
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 9.2e-33 143.7 84 71.4
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 9.2e-33 143.7 90 66.7
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-32 143.3 90 70.0
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.6e-32 142.9 91 67.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 2.1e-32 142.5 84 67.9
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.1e-32 142.5 89 67.4
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.1e-32 142.5 84 72.6
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 2.7e-32 142.1 90 66.7
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.7e-32 142.1 80 73.8
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.6e-32 141.4 85 71.8
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.0e-32 141.0 91 67.0
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 6.0e-32 141.0 90 66.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.0e-31 140.2 82 69.5
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.0e-31 140.2 82 69.5
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.0e-31 140.2 82 69.5
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.0e-31 140.2 82 69.5
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.0e-31 140.2 82 69.5
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.0e-31 140.2 90 65.6
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.0e-31 140.2 88 70.5
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.0e-31 140.2 90 65.6
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.0e-31 140.2 90 67.8
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.3e-31 139.8 96 63.5
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.7e-31 139.4 84 70.2
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-31 139.4 90 65.6
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 2.3e-31 139.0 80 70.0
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 2.3e-31 139.0 80 70.0
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.9e-31 138.3 90 66.7
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 3.9e-31 138.3 79 70.9
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 5.1e-31 137.9 77 75.3
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 6.6e-31 137.5 98 65.3
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 8.6e-31 137.1 90 64.4
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 8.6e-31 137.1 90 64.4
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-30 136.7 77 71.4
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-30 136.7 79 69.6
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.1e-30 136.7 79 69.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.1e-30 136.7 91 61.5
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.9e-30 136.0 82 68.3
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.9e-30 136.0 82 68.3
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 2.5e-30 135.6 76 72.4
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.5e-30 135.6 86 68.6
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 4.3e-30 134.8 80 67.5
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.6e-30 133.7 90 61.1
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.2e-29 133.3 90 60.0
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.6e-29 132.9 90 65.6
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.6e-29 132.9 106 59.4
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.8e-29 132.1 90 60.0
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.6e-29 131.7 84 66.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 8.1e-29 130.6 90 61.1
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.1e-28 130.2 80 65.0
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.4e-28 129.8 87 59.8
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.8e-28 129.4 81 66.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.4e-28 129.0 65 81.5
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 3.1e-28 128.6 90 60.0
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.2e-27 126.7 82 62.2
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.6e-27 125.6 80 62.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 3.4e-27 125.2 105 53.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.8e-27 124.4 132 48.5
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 7.6e-27 124.0 90 56.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 2.2e-26 122.5 111 53.2
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.9e-26 121.3 90 61.1
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 6.4e-26 120.9 122 49.2
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 4.2e-25 118.2 92 52.2
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.1e-25 117.5 84 65.5
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 9.3e-25 117.1 90 57.8
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.7e-23 112.8 75 68.0
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.3e-23 112.5 92 58.7
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 5.1e-23 111.3 73 65.8
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 5.1e-23 111.3 73 65.8
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.9e-22 109.4 81 61.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.5e-22 109.0 73 65.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 2.8e-21 105.5 90 55.6
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 6.2e-21 104.4 81 60.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 8.1e-21 104.0 52 82.7
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.1e-20 103.6 74 62.2
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 3.1e-20 102.1 52 78.8
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 5.3e-20 101.3 72 59.7
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.2e-19 100.1 72 58.3
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.5e-19 99.8 73 58.9
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.6e-19 99.0 72 59.7
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 8.4e-18 94.0 83 49.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.4e-17 93.2 64 68.8
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.4e-17 92.4 67 59.7
GSVIVG01006537001 Vitis vinifera HOM05D006296 ORTHO05D007777 2.3e-15 85.9 40 97.5
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.9e-10 68.9 43 67.4


User provided reference genes

Program Settings