Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.7e-106 389.4 202 100.0
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 3.0e-47 192.6 113 92.0
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 1.0e-39 167.5 146 65.1
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 4.3e-38 162.2 143 62.9
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 2.0e-35 153.3 177 54.8
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 2.0e-35 153.3 148 60.1
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 2.0e-35 153.3 180 51.7
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 2.7e-32 142.9 156 55.8
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 2.3e-31 139.8 142 55.6
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 3.9e-31 139.0 91 75.8
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 1.1e-30 137.5 129 61.2
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 5.6e-30 135.2 157 52.9
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 1.3e-29 134.0 124 60.5
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 3.6e-29 132.5 165 52.1
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 6.2e-29 131.7 154 51.9
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 9.0e-28 127.9 157 51.0
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.0e-27 126.7 147 53.1
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.6e-27 126.3 96 69.8
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 3.4e-27 125.9 152 49.3
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 4.5e-27 125.6 126 58.7
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 5.8e-27 125.2 121 58.7
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 5.8e-27 125.2 98 69.4
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 5.8e-27 125.2 99 69.7
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 9.9e-27 124.4 120 60.8
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 1.3e-26 124.0 133 56.4
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 1.3e-26 124.0 125 56.8
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.9e-26 122.9 98 68.4
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 2.9e-26 122.9 130 56.2
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 3.8e-26 122.5 70 85.7
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 4.9e-26 122.1 132 58.3
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 4.9e-26 122.1 123 56.9
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 8.4e-26 121.3 132 58.3
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 1.1e-25 120.9 119 61.3
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.4e-25 120.6 132 57.6
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 1.4e-25 120.6 120 58.3
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 3.2e-25 119.4 131 55.0
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.2e-25 119.4 110 61.8
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 4.2e-25 119.0 130 56.2
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 5.4e-25 118.6 122 59.8
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 7.1e-25 118.2 110 60.9
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 9.3e-25 117.9 124 58.1
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 6.0e-24 115.2 116 56.0
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 6.0e-24 115.2 99 64.6
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 7.9e-24 114.8 150 48.0
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 7.9e-24 114.8 91 63.7
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 7.9e-24 114.8 129 54.3
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 1.0e-23 114.4 130 55.4
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 1.0e-23 114.4 117 56.4
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 1.3e-23 114.0 123 56.1
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 1.3e-23 114.0 123 56.1
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 1.3e-23 114.0 133 57.1
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 1.3e-23 114.0 87 71.3
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 1.8e-23 113.6 130 54.6
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 1.8e-23 113.6 122 56.6
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 2.3e-23 113.2 122 57.4
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 3.9e-23 112.5 96 64.6
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 3.9e-23 112.5 127 54.3
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 3.9e-23 112.5 127 54.3
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 3.9e-23 112.5 121 54.5
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 3.9e-23 112.5 122 55.7
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 5.1e-23 112.1 124 54.8
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 1.1e-22 110.9 122 52.5
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 5.6e-22 108.6 125 54.4
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 7.4e-22 108.2 88 64.8
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 9.6e-22 107.8 68 77.9
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 9.6e-22 107.8 69 79.7
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 9.6e-22 107.8 132 50.8
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.1e-21 106.7 143 49.7
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.1e-21 106.7 143 49.7
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 2.1e-21 106.7 91 64.8
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 2.8e-21 106.3 131 48.9
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 3.7e-21 105.9 131 50.4
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 6.2e-21 105.1 118 51.7
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 8.1e-21 104.8 129 51.2
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 1.4e-20 104.0 103 56.3
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 2.4e-20 103.2 147 46.9
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.1e-20 102.8 68 77.9
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 4.0e-20 102.4 131 48.9
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 4.0e-20 102.4 128 51.6
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 5.3e-20 102.1 89 62.9
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 5.3e-20 102.1 110 51.8
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 9.0e-20 101.3 129 50.4
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 1.5e-19 100.5 103 55.3
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 2.6e-19 99.8 69 71.0
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 3.4e-19 99.4 71 67.6
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 4.5e-19 99.0 129 49.6
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.5e-19 99.0 129 50.4
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 5.8e-19 98.6 131 45.8
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 5.8e-19 98.6 129 48.1
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 5.8e-19 98.6 129 48.1
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 1.3e-18 97.4 119 46.2
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 8.4e-18 94.7 70 68.6
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 3.2e-17 92.8 58 81.0
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 9.3e-17 91.3 90 54.4
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 7.9e-16 88.2 122 45.9
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 7.9e-16 88.2 72 65.3
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 1.3e-13 80.9 45 86.7
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 3.7e-13 79.3 67 61.2
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 1.4e-12 77.4 105 47.6
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.2e-11 74.3 104 47.1
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.0e-11 73.6 94 43.6
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 7.1e-09 65.1 58 60.3
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 6.1e-08 62.0 33 90.9
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 4.3e-06 55.8 29 93.1


User provided reference genes

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