Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 1.8e-232 808.9 410 100.0
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.5e-228 794.3 412 98.3
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.7e-222 774.6 413 96.4
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.7e-222 774.6 413 96.1
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.8e-222 774.2 413 96.1
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 7.5e-191 670.6 415 85.5
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 5.7e-154 548.1 421 69.1
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 4.8e-145 518.5 421 67.5
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.0e-102 377.9 193 98.4
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 2.1e-84 317.0 402 49.3
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 2.2e-81 307.0 418 47.4
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 8.1e-76 288.5 420 44.5
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 4.0e-75 286.2 389 46.3
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 9.2e-72 275.0 404 45.3
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 7.8e-71 271.9 388 45.9
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 8.6e-70 268.5 400 44.2
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 3.6e-68 263.1 404 42.8
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.9e-64 250.8 298 48.3
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 4.6e-63 246.1 387 43.7
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 3.3e-61 240.0 375 42.4
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 7.3e-61 238.8 389 42.2
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 1.2e-58 231.5 333 44.4
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 3.4e-58 229.9 383 41.8
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.9e-56 224.2 399 41.1
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 4.6e-55 219.5 388 39.2
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 3.0e-54 216.9 394 40.1
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 3.9e-54 216.5 386 39.9
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 8.7e-54 215.3 280 48.6
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 4.8e-52 209.5 481 34.9
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.1e-51 208.4 392 41.1
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 9.0e-51 205.3 381 41.5
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 9.9e-50 201.8 329 39.8
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 9.9e-50 201.8 329 39.8
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 4.9e-49 199.5 392 37.8
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.1e-48 198.4 392 41.3
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 1.4e-48 198.0 401 36.9
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 4.6e-47 193.0 297 44.1
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 1.8e-46 191.0 332 38.0
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 3.0e-46 190.3 390 37.9
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 6.7e-46 189.1 333 38.1
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 3.7e-44 183.3 331 37.5
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 6.2e-44 182.6 217 50.2
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 6.2e-44 182.6 217 50.2
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.4e-43 181.4 353 37.4
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 2.6e-42 177.2 430 33.3
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 7.6e-42 175.6 357 40.1
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 1.0e-41 175.3 435 33.8
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 3.8e-41 173.3 352 36.4
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 4.9e-41 172.9 395 34.2
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 1.9e-40 171.0 352 36.4
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 5.5e-40 169.5 371 37.5
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 2.1e-39 167.5 236 45.3
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 6.0e-39 166.0 342 35.7
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 8.7e-38 162.2 334 37.1
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 5.7e-37 159.5 334 35.6
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 4.8e-36 156.4 415 32.8
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 1.1e-35 155.2 347 36.0
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 5.9e-34 149.4 284 38.7
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 7.6e-34 149.1 412 33.7
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 1.9e-32 144.4 332 32.5
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 5.5e-32 142.9 345 32.5
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 3.5e-31 140.2 419 31.5
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 6.7e-30 136.0 384 33.9
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 8.7e-30 135.6 343 34.4
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.5e-29 134.0 344 34.3
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 2.5e-29 134.0 392 34.2
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 1.6e-28 131.3 218 40.4
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 3.7e-28 130.2 253 39.1
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 3.7e-28 130.2 217 44.2
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 3.7e-28 130.2 217 44.2
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 6.3e-28 129.4 384 31.2
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 8.2e-28 129.0 334 32.6
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 1.8e-27 127.9 396 32.3
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 1.8e-27 127.9 212 42.0
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 3.4e-26 123.6 356 33.4
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 5.9e-26 122.9 384 34.1
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 1.7e-25 121.3 307 33.6
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 2.2e-25 120.9 300 33.3
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 1.9e-24 117.9 331 31.7
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 2.7e-23 114.0 353 32.9
Lj3g0005568 Lotus japonicus HOM05D007266 ORTHO05D005982 6.1e-23 112.8 271 33.6
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 1.0e-22 112.1 348 31.3
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 5.1e-22 109.8 131 49.6
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 1.5e-21 108.2 331 29.9
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 9.7e-21 105.5 393 29.5
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.7e-20 104.8 331 29.9
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 3.7e-20 103.6 332 30.1
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 3.7e-20 103.6 332 30.1
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 4.8e-20 103.2 326 31.3
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 6.3e-20 102.8 329 30.4
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 6.3e-20 102.8 332 29.5
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 8.2e-20 102.4 332 29.2
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 1.1e-19 102.1 331 29.0
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 1.4e-19 101.7 408 28.2
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 1.8e-19 101.3 337 32.9
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 2.4e-19 100.9 333 30.6
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 3.1e-19 100.5 272 33.1
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 4.1e-19 100.1 333 31.5
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 5.3e-19 99.8 331 30.2
Sc11g0006320 Simmondsia chinensis HOM05D007266 ORTHO05D005982 6.9e-19 99.4 215 35.3
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 9.1e-19 99.0 332 28.6
Lalb_Chr01g0007431 Lupinus albus HOM05D007266 ORTHO05D005982 9.1e-19 99.0 226 34.1
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 4.5e-18 96.7 240 33.3
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 5.9e-18 96.3 322 28.6
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 7.7e-18 95.9 335 31.9
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 1.7e-17 94.7 338 30.5
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 2.9e-17 94.0 331 29.6
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 2.9e-17 94.0 339 28.6
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 2.9e-17 94.0 325 28.9
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 2.9e-17 94.0 325 28.9
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 2.9e-17 94.0 339 28.6
TAR623G0806 Trochodendron aralioides HOM05D007266 ORTHO05D005982 8.5e-17 92.4 149 40.9
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 1.4e-16 91.7 334 28.4
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 1.4e-16 91.7 110 54.5
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 1.9e-16 91.3 331 30.2
MBI13_g09214_MAGBIO Magnolia biondii HOM05D007266 ORTHO05D005982 3.2e-16 90.5 327 28.1
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 1.2e-15 88.6 333 29.7
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 1.2e-15 88.6 333 29.7
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 1.2e-15 88.6 333 29.7
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 2.7e-15 87.4 331 29.6
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 2.7e-15 87.4 390 27.9
Aqoxy1G00397_Aqoxy1G00398 Aquilegia oxysepala HOM05D007266 ORTHO05D005982 6.1e-15 86.3 353 29.7
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 6.1e-15 86.3 222 33.3
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 1.8e-14 84.7 331 27.5
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 3.0e-14 84.0 126 42.1
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 4.4e-13 80.1 338 29.3
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 5.7e-13 79.7 335 29.6
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 5.7e-13 79.7 303 29.7
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 9.7e-13 79.0 124 41.9
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 1.3e-12 78.6 253 34.0
AT5G06980 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 2.4e-11 74.3 282 30.1
BcaB04g18684 Brassica carinata HOM05D008873 ORTHO05D005982 7.0e-11 72.8 98 42.9
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 1.6e-10 71.6 211 31.3
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.0e-09 68.9 133 36.1
Actinidia01518 Actinidia chinensis HOM05D007266 ORTHO05D005982 1.7e-09 68.2 87 46.0
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 2.9e-09 67.4 95 42.1
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 3.8e-09 67.0 101 41.6
SHI11361 Sapria himalayana HOM05D000436 ORTHO05D000678 1.1e-08 65.5 358 26.5
Oeu026157.1 Olea europaea HOM05D003662 ORTHO05D001824 2.5e-08 64.3 107 40.2
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 2.5e-08 64.3 249 27.7
EL10Ac2g02826 Beta vulgaris HOM05D004414 ORTHO05D001824 5.5e-08 63.2 142 34.5
Gorai.009G296300 Gossypium raimondii HOM05D004414 ORTHO05D001824 1.6e-07 61.6 92 37.0
ATR0753G089 Amborella trichopoda HOM05D003662 ORTHO05D001824 2.7e-07 60.8 176 33.0
AagrBONN_evm.TU.Sc2ySwM_344.4535 Anthoceros agrestis HOM05D004414 ORTHO05D001824 3.6e-07 60.5 108 38.9
CSS0012064 Camellia sinensis var. sinensis HOM05D003662 ORTHO05D001824 3.6e-07 60.5 109 36.7
Nn1g05340 Nelumbo nucifera HOM05D003662 ORTHO05D001824 4.7e-07 60.1 232 27.6
Glyma.08G073300 Glycine max HOM05D003662 ORTHO05D001824 6.1e-07 59.7 145 31.0
Sp2g27230 Schrenkiella parvula HOM05D003662 ORTHO05D001824 8.0e-07 59.3 129 30.2
Aa31sc25G30 Aethionema arabicum HOM05D008873 ORTHO05D005982 1.0e-06 58.9 96 39.6
Gohir.D05G282800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 1.0e-06 58.9 92 34.8
Hund00056 Selenicereus undatus HOM05D003662 ORTHO05D001824 1.0e-06 58.9 93 39.8
TWI23G0811 Tripterygium wilfordii HOM05D003662 ORTHO05D001824 1.0e-06 58.9 109 35.8
EL10Ac9g21467 Beta vulgaris HOM05D003662 ORTHO05D001824 1.4e-06 58.5 127 37.0
Gohir.A05G280800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 1.8e-06 58.2 92 34.8
HPP92_012077 Vanilla planifolia HOM05D005673 ORTHO05D037019 1.8e-06 58.2 94 39.4
Manes.06G010600 Manihot esculenta HOM05D003662 ORTHO05D001824 4.0e-06 57.0 159 31.4
Gohir.A04G113200 Gossypium hirsutum HOM05D003662 ORTHO05D001824 5.2e-06 56.6 135 29.6
CDE04G1684 Ceratophyllum demersum HOM05D003662 ORTHO05D001824 6.7e-06 56.2 95 38.9
Ciclev10027956m.g Citrus clementina HOM05D003662 ORTHO05D001824 6.7e-06 56.2 93 34.4
MD07G1036600 Malus domestica HOM05D004414 ORTHO05D001824 6.7e-06 56.2 153 26.1
Phvul.006G206900 Phaseolus vulgaris HOM05D003662 ORTHO05D001824 6.7e-06 56.2 187 26.7
SMO171G0055 Selaginella moellendorffii HOM05D003662 ORTHO05D001824 6.7e-06 56.2 92 39.1
TWI14G0069 Tripterygium wilfordii HOM05D003662 ORTHO05D001824 6.7e-06 56.2 93 37.6
CSS0028207 Camellia sinensis var. sinensis HOM05D004414 ORTHO05D001824 8.8e-06 55.8 100 36.0


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