Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g03060 Fragaria vesca HOM05D005112 ORTHO05D006681 0.0e+00 2377.4 1114 100.0
FAN03G1408 Fragaria x ananassa HOM05D005112 ORTHO05D006681 0.0e+00 2330.4 1114 97.7
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 0.0e+00 2291.9 1120 96.5
FAN10G2928 Fragaria x ananassa HOM05D005112 ORTHO05D006681 0.0e+00 2202.6 1114 93.4
RcHm_v2.0_Chr1g0324261 Rosa chinensis HOM05D005112 ORTHO05D006681 0.0e+00 2190.6 1123 90.7
MD02G1287500 Malus domestica HOM05D005112 ORTHO05D006681 0.0e+00 2035.0 1111 84.1
Prupe.2G035800 Prunus persica HOM05D005112 ORTHO05D006681 0.0e+00 1992.6 1110 82.3
Dinv32028 Davidia involucrata HOM05D005112 ORTHO05D006681 0.0e+00 1947.6 1110 78.8
CiPaw.13G013600 Carya illinoinensis HOM05D005112 ORTHO05D006681 0.0e+00 1906.0 1112 78.7
Thecc.10G157000 Theobroma cacao HOM05D005112 ORTHO05D006681 0.0e+00 1891.7 1112 76.5
QL04p017903 Quercus lobata HOM05D005112 ORTHO05D006681 0.0e+00 1888.6 1115 78.2
GSVIVG01013489001 Vitis vinifera HOM05D005112 ORTHO05D006681 0.0e+00 1888.2 1112 77.1
COL.COLO4_20752 Corchorus olitorius HOM05D005112 ORTHO05D006681 0.0e+00 1878.2 1112 75.8
Gohir.D06G185100 Gossypium hirsutum HOM05D005112 ORTHO05D006681 0.0e+00 1870.1 1112 75.5
Gorai.010G216500 Gossypium raimondii HOM05D005112 ORTHO05D006681 0.0e+00 1868.6 1112 75.4
Gohir.A06G175300 Gossypium hirsutum HOM05D005112 ORTHO05D006681 0.0e+00 1865.5 1112 75.3
Prupe.2G035600 Prunus persica HOM05D005112 ORTHO05D006681 0.0e+00 1852.4 1110 77.7
Duzib114G0621 Durio zibethinus HOM05D005112 ORTHO05D006681 0.0e+00 1852.0 1112 75.3
Manes.04G159700 Manihot esculenta HOM05D005112 ORTHO05D006681 0.0e+00 1845.1 1111 75.3
Potri.001G027400 Populus trichocarpa HOM05D005112 ORTHO05D006681 0.0e+00 1844.3 1107 75.8
TWI38G0195 Tripterygium wilfordii HOM05D005112 ORTHO05D006681 0.0e+00 1832.4 1112 74.8
Potri.003G196500 Populus trichocarpa HOM05D005112 ORTHO05D006681 0.0e+00 1832.0 1111 74.6
CANSAT56G3144 Cannabis sativa HOM05D005112 ORTHO05D006681 0.0e+00 1818.1 1115 73.5
CSS0041800 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 0.0e+00 1813.9 1074 77.0
Actinidia02264 Actinidia chinensis HOM05D005112 ORTHO05D006681 0.0e+00 1810.8 1113 72.8
Nn7g36668 Nelumbo nucifera HOM05D005112 ORTHO05D006681 0.0e+00 1809.3 1109 73.3
ClCG05G026800 Citrullus lanatus HOM05D005112 ORTHO05D006681 0.0e+00 1801.2 1115 72.4
CsaV3_5G036760 Cucumis sativus L. HOM05D005112 ORTHO05D006681 0.0e+00 1799.6 1114 72.2
PSO339G5424 Papaver somniferum HOM05D005112 ORTHO05D006681 0.0e+00 1795.8 1112 72.3
Eucgr.J01181 Eucalyptus grandis HOM05D005112 ORTHO05D006681 0.0e+00 1788.1 1110 72.8
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 0.0e+00 1787.7 1067 75.4
Glyma.13G197000 Glycine max HOM05D005112 ORTHO05D006681 0.0e+00 1783.1 1118 72.1
Sabra01G0019900 Salix brachista HOM05D005112 ORTHO05D006681 0.0e+00 1782.7 1221 68.5
Lj3g0016153 Lotus japonicus HOM05D005112 ORTHO05D006681 0.0e+00 1779.6 1110 71.6
Sabra03G0146500 Salix brachista HOM05D005112 ORTHO05D006681 0.0e+00 1779.6 1117 73.4
Lalb_Chr01g0007751 Lupinus albus HOM05D005112 ORTHO05D006681 0.0e+00 1773.1 1110 72.3
Psat4g144800 Pisum sativum HOM05D005112 ORTHO05D006681 0.0e+00 1772.7 1116 72.0
Phvul.011G206800 Phaseolus vulgaris HOM05D005112 ORTHO05D006681 0.0e+00 1767.3 1118 71.4
TPR.G27820 Trifolium pratense HOM05D005112 ORTHO05D006681 0.0e+00 1767.3 1113 71.3
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea HOM05D005112 ORTHO05D006681 0.0e+00 1766.9 1117 71.4
THA.LOC104824194 Tarenaya hassleriana HOM05D005112 ORTHO05D006681 0.0e+00 1764.6 1111 71.0
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea HOM05D005112 ORTHO05D006681 0.0e+00 1763.4 1117 71.1
Ca_23958_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 0.0e+00 1763.4 1110 71.4
Aqoxy2G00366 Aquilegia oxysepala HOM05D005112 ORTHO05D006681 0.0e+00 1762.7 1096 72.4
Cfa010916 Carpinus fangiana HOM05D005112 ORTHO05D006681 0.0e+00 1761.5 989 81.6
MELO3C012472.2 Cucumis melo HOM05D005112 ORTHO05D006681 0.0e+00 1761.5 1122 71.0
MBI09_g12849_MAGBIO Magnolia biondii HOM05D005112 ORTHO05D006681 0.0e+00 1760.7 1121 71.6
Medtr8g039160 Medicago truncatula HOM05D005112 ORTHO05D006681 0.0e+00 1760.3 1112 71.0
Sed0008595 Sechium edule HOM05D005112 ORTHO05D006681 0.0e+00 1758.8 1110 71.4
DCAR_006636 Daucus carota HOM05D005112 ORTHO05D006681 0.0e+00 1756.1 1110 71.1
PGR044G1764 Punica granatum HOM05D005112 ORTHO05D006681 0.0e+00 1756.1 1108 72.2
MSTRG.20515 Avicennia marina HOM05D005112 ORTHO05D006681 0.0e+00 1754.6 1123 70.4
VMungo1127G0803 Vigna mungo HOM05D005112 ORTHO05D006681 0.0e+00 1748.8 1120 70.6
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 0.0e+00 1746.9 1058 74.1
BraA04t16238Z Brassica rapa HOM05D005112 ORTHO05D006681 0.0e+00 1745.7 1108 70.4
BcaB02g08488 Brassica carinata HOM05D005112 ORTHO05D006681 0.0e+00 1744.2 1108 70.4
Cc02_g30230 Coffea canephora HOM05D005112 ORTHO05D006681 0.0e+00 1744.2 1111 70.3
Thhalv10010080m.g Eutrema salsugineum HOM05D005112 ORTHO05D006681 0.0e+00 1743.8 1108 70.6
Sc14g0005780 Simmondsia chinensis HOM05D005112 ORTHO05D006681 0.0e+00 1743.4 1108 70.8
BcaC02g09069 Brassica carinata HOM05D005112 ORTHO05D006681 0.0e+00 1736.9 1098 70.6
Sp5g07980 Schrenkiella parvula HOM05D005112 ORTHO05D006681 0.0e+00 1736.9 1109 70.2
Carub.0005s2104 Capsella rubella HOM05D005112 ORTHO05D006681 0.0e+00 1736.1 1107 69.8
C04p38070 Brassica napus HOM05D005112 ORTHO05D006681 0.0e+00 1733.8 1100 70.5
AL5G35490 Arabidopsis lyrata HOM05D005112 ORTHO05D006681 0.0e+00 1727.2 1107 69.7
AT3G54440 Arabidopsis thaliana HOM05D005112 ORTHO05D006681 0.0e+00 1726.8 1107 69.6
BolC4t25382H Brassica oleracea HOM05D005112 ORTHO05D006681 0.0e+00 1724.1 1109 69.9
A04p05380 Brassica napus HOM05D005112 ORTHO05D006681 0.0e+00 1723.4 1100 70.3
CAN.G176.1 Capsicum annuum HOM05D005112 ORTHO05D006681 0.0e+00 1711.8 1109 69.3
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 0.0e+00 1710.3 1068 71.9
Peaxi162Scf00767g00521 Petunia axillaris HOM05D005112 ORTHO05D006681 0.0e+00 1709.9 1108 69.4
EL10Ac2g02802 Beta vulgaris HOM05D005112 ORTHO05D006681 0.0e+00 1709.1 1109 68.9
Solyc08g014480.4 Solanum lycopersicum HOM05D005112 ORTHO05D006681 0.0e+00 1704.1 1109 68.4
HanXRQChr14g0446561 Helianthus annuus HOM05D005112 ORTHO05D006681 0.0e+00 1703.7 1101 69.8
Sopen08g005470 Solanum pennellii HOM05D005112 ORTHO05D006681 0.0e+00 1703.3 1109 68.7
AUR62026862 Chenopodium quinoa HOM05D005112 ORTHO05D006681 0.0e+00 1691.0 1097 68.6
Lsat_1_v5_gn_2_64381 Lactuca sativa HOM05D005112 ORTHO05D006681 0.0e+00 1681.8 1094 69.5
AUR62032651 Chenopodium quinoa HOM05D005112 ORTHO05D006681 0.0e+00 1672.1 1112 67.4
unitig_22.g5425 Utricularia gibba HOM05D005112 ORTHO05D006681 0.0e+00 1662.5 1121 66.6
SGA_v2.0_scaffold124G33611 Striga asiatica HOM05D005112 ORTHO05D006681 0.0e+00 1646.3 1124 67.1
ECA238G0687 Erigeron canadensis HOM05D005112 ORTHO05D006681 0.0e+00 1642.5 1093 68.5
ATR0745G067 Amborella trichopoda HOM05D005112 ORTHO05D006681 0.0e+00 1641.3 1118 67.0
Aa31LG10G13430 Aethionema arabicum HOM05D005112 ORTHO05D006681 0.0e+00 1618.6 1135 65.2
Os01g0952600 Oryza sativa ssp. japonica HOM05D005112 ORTHO05D006681 0.0e+00 1598.6 1124 64.2
Lj9C664G6 Lonicera japonica HOM05D005112 ORTHO05D006681 0.0e+00 1560.8 1160 63.2
Migut.B01228 Erythranthe guttata HOM05D005112 ORTHO05D006681 0.0e+00 1554.7 995 71.4
Zm00001eb140720 Zea mays HOM05D005112 ORTHO05D006681 0.0e+00 1531.9 1076 64.0
Cpa.g.sc540.3 Carica papaya HOM05D005112 ORTHO05D006681 0.0e+00 1516.5 915 75.3
Atru.chr12.1339 Acer truncatum HOM05D005112 ORTHO05D006681 0.0e+00 1504.6 898 76.4
TAR636G2362 Trochodendron aralioides HOM05D005112 ORTHO05D006681 0.0e+00 1351.3 830 74.1
Ciclev10027821m.g Citrus clementina HOM05D005112 ORTHO05D006681 0.0e+00 1348.6 831 74.4
Nitab4.5_0000013g0140 Nicotiana tabacum HOM05D005112 ORTHO05D006681 0.0e+00 1339.7 1034 60.8
Pp3c7_1630 Physcomitrium patens HOM05D005112 ORTHO05D006681 0.0e+00 1333.2 1132 54.6
Mapoly0086s0033 Marchantia polymorpha HOM05D005112 ORTHO05D006681 0.0e+00 1327.8 1135 54.4
FAN10G3804 Fragaria x ananassa HOM05D005112 ORTHO05D006681 0.0e+00 1325.5 691 91.5
Hma1.2p1_1202F.1_g266830 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 0.0e+00 1282.3 749 76.5
SMO266G0060 Selaginella moellendorffii HOM05D005112 ORTHO05D006681 0.0e+00 1276.5 1109 53.9
TAR636G0153 Trochodendron aralioides HOM05D005112 ORTHO05D006681 0.0e+00 1246.1 741 75.8
vmacro12696 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 0.0e+00 1242.3 759 74.7
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis HOM05D005112 ORTHO05D006681 0.0e+00 1186.8 1131 50.9
CARHR164340 Cardamine hirsuta HOM05D005112 ORTHO05D006681 0.0e+00 1135.9 665 75.9
CBR_g32018 Chara braunii HOM05D005112 ORTHO05D006681 7.6e-312 1074.7 1127 48.1
HPP92_012095 Vanilla planifolia HOM05D005112 ORTHO05D006681 9.0e-263 911.0 696 61.2
Oeu042660.1 Olea europaea HOM05D005112 ORTHO05D006681 1.1e-244 850.9 498 77.5
Nitab4.5_0002123g0040 Nicotiana tabacum HOM05D005112 ORTHO05D006681 1.3e-224 784.3 568 62.9
Hund27782 Selenicereus undatus HOM05D005112 ORTHO05D006681 1.5e-220 770.8 529 65.6
Hund27779 Selenicereus undatus HOM05D005112 ORTHO05D006681 3.6e-219 766.1 529 65.6
Cre08.g379450 Chlamydomonas reinhardtii HOM05D005112 ORTHO05D006681 2.8e-171 607.1 1494 30.3
vmacro12695 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 1.5e-156 558.1 384 67.4
MCO01G649 Micromonas commoda HOM05D005112 ORTHO05D006681 3.9e-149 533.5 601 46.4
Ciclev10030068m.g Citrus clementina HOM05D005112 ORTHO05D006681 1.6e-139 501.5 283 79.2
Haze_03042 Corylus avellana HOM05D005112 ORTHO05D006681 2.5e-119 434.5 1108 29.8
TAR636G0412 Trochodendron aralioides HOM05D005112 ORTHO05D006681 2.1e-118 431.4 240 78.3
Nitab4.5_0002123g0060 Nicotiana tabacum HOM05D005112 ORTHO05D006681 9.1e-114 416.0 272 71.3
PRCOL_00006392 Prasinoderma coloniale HOM05D005112 ORTHO05D006681 4.2e-111 407.1 598 38.1
RcHm_v2.0_Chr1g0324211 Rosa chinensis HOM05D005112 ORTHO05D006681 4.8e-107 393.7 202 88.6
Atru.chr12.1338 Acer truncatum HOM05D005112 ORTHO05D006681 2.3e-96 358.2 195 80.0
MD07G1040100 Malus domestica HOM05D005112 ORTHO05D006681 1.6e-89 335.5 174 88.5
CDE08G0398 Ceratophyllum demersum HOM05D005112 ORTHO05D006681 2.7e-89 334.7 259 57.9
ATR0980G001 Amborella trichopoda HOM05D005112 ORTHO05D006681 9.5e-79 299.7 208 66.8
MD07G1040000 Malus domestica HOM05D005112 ORTHO05D006681 3.6e-70 271.2 164 78.7
Nitab4.5_0002123g0050 Nicotiana tabacum HOM05D005112 ORTHO05D006681 1.9e-66 258.8 156 69.9
SEGI_06402 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 9.9e-60 236.5 208 51.9
Cpa.g.sc540.4 Carica papaya HOM05D005112 ORTHO05D006681 1.5e-55 222.6 130 71.5
MD07G1039900 Malus domestica HOM05D005112 ORTHO05D006681 1.4e-50 206.1 123 74.8
Hma1.2p1_1202F.1_g266800 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 2.0e-44 185.7 121 65.3
FvH4_4g11040 Fragaria vesca HOM05D005112 ORTHO05D006681 5.8e-44 184.1 101 88.1
Lsat_1_v5_gn_3_3641 Lactuca sativa HOM05D005112 ORTHO05D003508 1.5e-39 169.5 190 45.3
Lsat_1_v5_gn_3_132500 Lactuca sativa HOM05D005112 ORTHO05D001778 2.6e-36 158.7 173 45.7
ATR0980G009 Amborella trichopoda HOM05D005112 ORTHO05D006681 1.7e-35 156.0 112 60.7
Lsat_1_v5_gn_4_130540 Lactuca sativa HOM05D005112 ORTHO05D006681 1.9e-34 152.5 182 44.0
Lsat_1_v5_gn_2_30340 Lactuca sativa HOM05D005112 ORTHO05D006681 2.5e-34 152.1 82 79.3
Lsat_1_v5_gn_2_52800 Lactuca sativa HOM05D005112 ORTHO05D006681 5.5e-34 151.0 142 50.0
Lsat_1_v5_gn_1_113260 Lactuca sativa HOM05D005112 ORTHO05D006681 1.6e-33 149.4 136 50.7
SEGI_07839 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 9.6e-31 140.2 121 52.1
SEGI_07313 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 8.2e-30 137.1 75 74.7
Lsat_1_v5_gn_3_137840 Lactuca sativa HOM05D005112 ORTHO05D036434 2.0e-28 132.5 141 51.8
CSS0018226 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 2.6e-28 132.1 85 65.9
Thecc.10G156500 Theobroma cacao HOM05D005112 ORTHO05D006681 5.0e-27 127.9 132 50.0
Lsat_1_v5_gn_9_73420 Lactuca sativa HOM05D001315 ORTHO05D001618 8.7e-24 117.1 66 71.2
CSS0001243 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 1.9e-23 115.9 53 90.6
Lsat_1_v5_gn_9_95981 Lactuca sativa HOM05D005112 ORTHO05D036434 1.6e-22 112.8 118 52.5
unitig_22.g5418 Utricularia gibba HOM05D003814 ORTHO05D004399 1.2e-20 106.7 114 48.2
Lsat_1_v5_gn_8_105280 Lactuca sativa HOM05D000295 ORTHO05D000188 2.5e-18 99.0 101 45.5
Lsat_1_v5_gn_4_82640 Lactuca sativa HOM05D001821 ORTHO05D001778 5.5e-18 97.8 101 45.5
Lsat_1_v5_gn_4_185820 Lactuca sativa HOM05D012196 ORTHO05D016147 9.4e-18 97.1 84 51.2
Lsat_1_v5_gn_8_160861 Lactuca sativa HOM05D000295 ORTHO05D000188 1.4e-16 93.2 45 77.8
Lsat_1_v5_gn_4_23800 Lactuca sativa HOM05D000069 ORTHO05D016147 8.8e-16 90.5 45 77.8
Lsat_1_v5_gn_1_115820 Lactuca sativa HOM05D005112 ORTHO05D036434 2.0e-15 89.4 136 41.2
Lsat_1_v5_gn_9_100881 Lactuca sativa HOM05D005112 ORTHO05D016147 2.0e-15 89.4 48 72.9
Lsat_1_v5_gn_3_85321 Lactuca sativa HOM05D000295 ORTHO05D006681 7.4e-15 87.4 45 73.3
Cfa026367 Carpinus fangiana HOM05D005112 ORTHO05D123685 1.8e-13 82.8 385 25.5
FAN12G0942 Fragaria x ananassa HOM05D018336 ORTHO05D006090 5.9e-12 77.8 47 83.0
Actinidia21519 Actinidia chinensis HOM05D000850 ORTHO05D000266 5.5e-10 71.2 45 66.7
BcaC08g43326 Brassica carinata HOM05D005112 ORTHO05D006681 5.5e-10 71.2 61 52.5
Lsat_1_v5_gn_5_181001 Lactuca sativa HOM05D005112 ORTHO05D006681 1.7e-06 59.7 90 36.7
CSS0027518 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D111919 3.7e-06 58.5 36 72.2


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