Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 5.7e-58 227.3 105 100.0
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.9e-53 212.2 98 100.0
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.9e-50 202.2 101 94.1
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 2.2e-49 198.7 101 92.1
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.7e-49 198.0 101 91.1
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 3.7e-49 198.0 101 91.1
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.1e-45 186.4 109 82.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 5.1e-43 177.6 101 82.2
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 4.8e-41 171.0 101 79.2
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 2.2e-33 145.6 105 71.4
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.2e-31 139.8 98 70.4
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.6e-31 139.4 104 65.4
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.6e-31 138.7 104 65.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 5.9e-31 137.5 104 64.4
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.0e-30 136.7 106 64.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.7e-30 136.0 99 67.7
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.7e-30 136.0 99 67.7
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 8.5e-30 133.7 104 61.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.5e-29 132.9 101 65.3
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.2e-29 131.7 101 62.4
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 4.2e-29 131.3 101 62.4
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 7.2e-29 130.6 103 59.2
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.6e-28 129.4 101 63.4
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.6e-28 129.4 107 59.8
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.6e-28 129.4 81 71.6
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.1e-28 129.0 95 64.2
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.1e-28 129.0 107 61.7
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.7e-28 128.6 98 63.3
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.6e-28 128.3 95 65.3
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 8.0e-28 127.1 88 70.5
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 8.0e-28 127.1 104 62.5
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.0e-28 127.1 107 59.8
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.4e-27 126.3 101 57.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.4e-27 126.3 104 61.5
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-27 126.3 103 64.1
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.3e-27 125.6 108 63.0
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.0e-27 125.2 79 72.2
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 4.0e-27 124.8 97 63.9
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 5.2e-27 124.4 101 58.4
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 6.7e-27 124.0 109 57.8
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 6.7e-27 124.0 104 60.6
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 8.8e-27 123.6 108 56.5
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 8.8e-27 123.6 102 60.8
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.1e-26 123.2 101 61.4
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.1e-26 123.2 83 69.9
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.0e-26 122.5 94 58.5
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.6e-26 122.1 101 58.4
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.6e-26 122.1 78 70.5
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 2.6e-26 122.1 107 57.0
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 5.7e-26 120.9 75 72.0
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 5.7e-26 120.9 75 72.0
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 9.7e-26 120.2 78 71.8
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.7e-25 119.4 75 68.0
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.2e-25 119.0 96 59.4
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 2.2e-25 119.0 107 57.9
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 3.7e-25 118.2 103 57.3
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 3.7e-25 118.2 108 58.3
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 4.8e-25 117.9 99 60.6
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 4.8e-25 117.9 104 56.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 8.2e-25 117.1 90 63.3
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.8e-24 115.9 89 59.6
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.8e-24 115.9 81 66.7
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.1e-24 115.2 107 56.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 3.1e-24 115.2 107 56.1
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 4.1e-24 114.8 107 58.9
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 4.1e-24 114.8 96 58.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 5.3e-24 114.4 101 55.4
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 7.0e-24 114.0 104 52.9
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 7.0e-24 114.0 104 52.9
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 7.0e-24 114.0 81 65.4
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 7.0e-24 114.0 102 56.9
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 7.0e-24 114.0 95 60.0
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.2e-23 113.2 71 66.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 1.6e-23 112.8 101 56.4
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.6e-23 112.8 107 55.1
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 2.0e-23 112.5 104 52.9
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.0e-23 112.5 108 54.6
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 2.7e-23 112.1 70 68.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.7e-23 112.1 102 56.9
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 7.7e-23 110.5 72 63.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 7.7e-23 110.5 105 57.1
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-22 109.8 101 54.5
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-22 109.8 101 54.5
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-22 109.8 101 54.5
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.3e-22 109.8 101 54.5
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.3e-22 109.8 101 54.5
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.3e-22 109.8 102 54.9
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.9e-22 108.6 105 55.2
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.9e-22 108.6 104 55.8
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.9e-22 108.6 104 55.8
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 6.5e-22 107.5 139 44.6
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-21 106.3 70 62.9
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-21 106.3 70 62.9
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.5e-21 106.3 81 61.7
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.9e-21 105.9 68 64.7
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 4.2e-21 104.8 109 52.3
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 5.5e-21 104.4 68 63.2
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 5.5e-21 104.4 68 63.2
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 7.2e-21 104.0 68 63.2
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.6e-20 102.8 82 54.9
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.0e-19 100.1 56 76.8
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.4e-19 99.8 82 53.7
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.4e-19 99.8 105 48.6
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.8e-19 99.4 66 65.2
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.3e-19 99.0 82 54.9
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.2e-19 97.8 81 55.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.2e-18 96.7 103 48.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-18 96.3 96 47.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.5e-18 96.3 100 47.0
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.5e-18 96.3 102 52.9
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.4e-18 95.1 67 61.2
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.3e-17 90.9 84 50.0
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.8e-16 89.4 105 53.3
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.1e-16 88.6 69 56.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 2.0e-10 69.3 43 69.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 2.6e-10 68.9 81 46.9
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 5.7e-10 67.8 43 65.1
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.7e-09 66.2 48 64.6
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 4.9e-09 64.7 37 75.7
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 6.3e-09 64.3 66 45.5
arahy.Tifrunner.gnm1.ann1.W44VBU Arachis hypogaea HOM05D043198 ORTHO05D007777 2.7e-07 58.9 39 66.7
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 7.7e-07 57.4 68 48.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.0e-06 57.0 66 47.0
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.3e-06 56.6 63 49.2


User provided reference genes

Program Settings