Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g06980 Fragaria vesca HOM05D003220 ORTHO05D003944 8.6e-202 706.8 373 100.0
FvH4_5g06920 Fragaria vesca HOM05D003220 ORTHO05D003944 8.0e-131 471.1 388 72.2
RcHm_v2.0_Chr7g0190471 Rosa chinensis HOM05D003220 ORTHO05D003944 1.0e-56 224.9 175 70.9
FvH4_5g07910 Fragaria vesca HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FvH4_5g30030 Fragaria vesca HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FAN04G2217 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FAN08G0739 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FAN08G0954 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FAN13G0994 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 175 70.3
FAN18G1033 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
FAN18G3924 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
RcHm_v2.0_Chr7g0190481 Rosa chinensis HOM05D003220 ORTHO05D003944 3.8e-56 223.0 125 88.8
Phvul.003G209766 Phaseolus vulgaris HOM05D003220 ORTHO05D003944 3.2e-55 219.9 125 87.2
VMungo1215G0590 Vigna mungo HOM05D003220 ORTHO05D003944 3.2e-55 219.9 125 87.2
PGR004G0659 Punica granatum HOM05D003220 ORTHO05D003944 4.2e-55 219.5 125 87.2
Sc10g0010420 Simmondsia chinensis HOM05D003220 ORTHO05D003944 4.2e-55 219.5 128 85.2
Phvul.003G209832 Phaseolus vulgaris HOM05D003220 ORTHO05D003944 5.5e-55 219.2 136 80.9
Ciclev10019860m.g Citrus clementina HOM05D003220 ORTHO05D003944 7.1e-55 218.8 125 87.2
Duzib205G1890 Durio zibethinus HOM05D003220 ORTHO05D003944 7.1e-55 218.8 125 86.4
Thecc.03G126500 Theobroma cacao HOM05D003220 ORTHO05D003944 7.1e-55 218.8 125 86.4
Glyma.05G046700 Glycine max HOM05D003220 ORTHO05D003944 9.3e-55 218.4 125 86.4
Glyma.17G128600 Glycine max HOM05D003220 ORTHO05D003944 9.3e-55 218.4 125 86.4
GSVIVG01008510001 Vitis vinifera HOM05D003220 ORTHO05D003944 9.3e-55 218.4 125 86.4
Gorai.001G059900 Gossypium raimondii HOM05D003220 ORTHO05D003944 1.6e-54 217.6 125 86.4
AUR62009263 Chenopodium quinoa HOM05D003220 ORTHO05D003944 2.1e-54 217.2 130 82.3
Gohir.A07G051900 Gossypium hirsutum HOM05D003220 ORTHO05D003944 2.1e-54 217.2 145 77.9
Manes.03G085300 Manihot esculenta HOM05D003220 ORTHO05D003944 2.1e-54 217.2 125 85.6
PSO782G5387 Papaver somniferum HOM05D003220 ORTHO05D003944 2.1e-54 217.2 125 86.4
Sc10g0008710 Simmondsia chinensis HOM05D003220 ORTHO05D003944 2.1e-54 217.2 128 84.4
Gohir.D07G056400 Gossypium hirsutum HOM05D003220 ORTHO05D003944 2.7e-54 216.9 145 77.2
Hund03392 Selenicereus undatus HOM05D003220 ORTHO05D003944 2.7e-54 216.9 130 82.3
Nn4g26515 Nelumbo nucifera HOM05D003220 ORTHO05D003944 3.5e-54 216.5 129 82.9
Glyma.05G236000 Glycine max HOM05D003220 ORTHO05D003944 4.6e-54 216.1 125 85.6
Aqoxy6G02806 Aquilegia oxysepala HOM05D003220 ORTHO05D003944 6.0e-54 215.7 125 85.6
AUR62042443 Chenopodium quinoa HOM05D003220 ORTHO05D003944 6.0e-54 215.7 130 81.5
TWI38G0393 Tripterygium wilfordii HOM05D003220 ORTHO05D003944 6.0e-54 215.7 125 85.6
ECA246G3064 Erigeron canadensis HOM05D003220 ORTHO05D003944 7.9e-54 215.3 125 85.6
PSO478G5055 Papaver somniferum HOM05D003220 ORTHO05D003944 7.9e-54 215.3 145 76.6
TAR629G1627 Trochodendron aralioides HOM05D003220 ORTHO05D003944 7.9e-54 215.3 125 84.8
CANSAT80G2734 Cannabis sativa HOM05D003220 ORTHO05D003944 1.0e-53 214.9 125 85.6
Duzib084G0962 Durio zibethinus HOM05D003220 ORTHO05D003944 1.0e-53 214.9 125 84.8
HanXRQChr05g0155091 Helianthus annuus HOM05D003220 ORTHO05D003944 1.0e-53 214.9 125 84.8
HanXRQChr08g0229301 Helianthus annuus HOM05D003220 ORTHO05D003944 1.0e-53 214.9 125 84.8
Nitab4.5_0000231g0280 Nicotiana tabacum HOM05D003220 ORTHO05D003944 1.0e-53 214.9 121 87.6
Nitab4.5_0001487g0130 Nicotiana tabacum HOM05D003220 ORTHO05D003944 1.0e-53 214.9 121 87.6
Potri.008G020200 Populus trichocarpa HOM05D003220 ORTHO05D003944 1.0e-53 214.9 125 84.0
SalBow2G0412 Salvia bowleyana HOM05D003220 ORTHO05D003944 1.0e-53 214.9 121 86.8
CANSAT64G0212 Cannabis sativa HOM05D003220 ORTHO05D003944 1.3e-53 214.5 135 80.0
Aqoxy7G03930 Aquilegia oxysepala HOM05D003220 ORTHO05D003944 1.8e-53 214.2 125 84.8
TWI63G1463 Tripterygium wilfordii HOM05D003220 ORTHO05D003944 1.8e-53 214.2 125 84.8
TAR371G0289 Trochodendron aralioides HOM05D003220 ORTHO05D003944 1.8e-53 214.2 125 84.0
CDE09G1413 Ceratophyllum demersum HOM05D003220 ORTHO05D003944 2.3e-53 213.8 125 83.2
Migut.N00934 Erythranthe guttata HOM05D003220 ORTHO05D003944 2.3e-53 213.8 121 86.0
Potri.010G239000 Populus trichocarpa HOM05D003220 ORTHO05D003944 2.3e-53 213.8 174 67.8
Ca_00914_v3 Cicer arietinum L. HOM05D003220 ORTHO05D003944 3.0e-53 213.4 125 84.8
MD06G1144100 Malus domestica HOM05D003220 ORTHO05D003944 3.0e-53 213.4 125 85.6
Medtr4g103680 Medicago truncatula HOM05D003220 ORTHO05D003944 3.0e-53 213.4 125 84.8
Prupe.5G153100 Prunus persica HOM05D003220 ORTHO05D003944 3.0e-53 213.4 125 84.8
SGA_v2.0_scaffold376G50300 Striga asiatica HOM05D003220 ORTHO05D001798 3.0e-53 213.4 121 86.0
TPR.G30011 Trifolium pratense HOM05D003220 ORTHO05D003944 3.0e-53 213.4 125 84.8
MSTRG.21708 Avicennia marina HOM05D003220 ORTHO05D003944 3.9e-53 213.0 121 86.0
MD06G1144000 Malus domestica HOM05D003220 ORTHO05D003944 3.9e-53 213.0 125 84.8
Psat4g065240 Pisum sativum HOM05D003220 ORTHO05D003944 3.9e-53 213.0 125 84.8
Atru.chr9.1087 Acer truncatum HOM05D003220 ORTHO05D003944 5.1e-53 212.6 136 79.4
CSS0002367 Camellia sinensis var. sinensis HOM05D003220 ORTHO05D003944 5.1e-53 212.6 121 86.0
Duzib068G0624 Durio zibethinus HOM05D003220 ORTHO05D003944 5.1e-53 212.6 125 84.0
Lalb_Chr07g0183341 Lupinus albus HOM05D003220 ORTHO05D003944 5.1e-53 212.6 125 84.8
CSS0036065 Camellia sinensis var. sinensis HOM05D003220 ORTHO05D003944 6.7e-53 212.2 121 85.1
Migut.D00060 Erythranthe guttata HOM05D003220 ORTHO05D003944 6.7e-53 212.2 121 85.1
Medtr5g042880 Medicago truncatula HOM05D003220 ORTHO05D003944 6.7e-53 212.2 125 84.0
MSTRG.18081 Avicennia marina HOM05D003220 ORTHO05D003944 8.7e-53 211.8 124 82.3
Sed0014346 Sechium edule HOM05D003220 ORTHO05D003944 8.7e-53 211.8 125 81.6
Solyc05g012270.3 Solanum lycopersicum HOM05D003220 ORTHO05D003944 8.7e-53 211.8 121 86.0
Sopen05g007100 Solanum pennellii HOM05D003220 ORTHO05D003944 8.7e-53 211.8 121 86.0
PGSC0003DMG400028317 Solanum tuberosum HOM05D003220 ORTHO05D003944 8.7e-53 211.8 121 86.0
ClCG03G003670 Citrullus lanatus HOM05D003220 ORTHO05D003944 1.1e-52 211.5 125 82.4
MELO3C002352.2 Cucumis melo HOM05D003220 ORTHO05D003944 1.1e-52 211.5 125 82.4
Lj2g0018966 Lotus japonicus HOM05D003220 ORTHO05D003944 1.1e-52 211.5 125 84.0
Lj4g0002027 Lotus japonicus HOM05D003220 ORTHO05D003944 1.1e-52 211.5 125 84.0
Peaxi162Scf00175g00120 Petunia axillaris HOM05D003220 ORTHO05D003944 1.1e-52 211.5 121 86.0
Prupe.7G058500 Prunus persica HOM05D003220 ORTHO05D003944 1.1e-52 211.5 125 84.0
SGA_v2.0_scaffold334G49089 Striga asiatica HOM05D003220 ORTHO05D003944 1.1e-52 211.5 121 85.1
DCAR_007481 Daucus carota HOM05D003220 ORTHO05D003944 1.5e-52 211.1 124 83.1
ECA247G3880 Erigeron canadensis HOM05D003220 ORTHO05D003944 1.5e-52 211.1 125 82.4
Lalb_Chr13g0297361 Lupinus albus HOM05D003220 ORTHO05D003944 1.9e-52 210.7 125 84.0
CsaV3_1G009560 Cucumis sativus L. HOM05D003220 ORTHO05D003944 2.5e-52 210.3 125 82.4
Os12g0235800 Oryza sativa ssp. japonica HOM05D003220 ORTHO05D003944 3.3e-52 209.9 151 70.9
QL10p004159 Quercus lobata HOM05D003220 ORTHO05D003944 3.3e-52 209.9 125 82.4
Sed0000451 Sechium edule HOM05D003220 ORTHO05D003944 3.3e-52 209.9 133 78.9
A01p16140 Brassica napus HOM05D003220 ORTHO05D003944 4.3e-52 209.5 135 80.0
C01p20130 Brassica napus HOM05D003220 ORTHO05D003944 4.3e-52 209.5 135 80.0
BolC1t01942H Brassica oleracea HOM05D003220 ORTHO05D003944 4.3e-52 209.5 135 80.0
BraA01t01550Z Brassica rapa HOM05D003220 ORTHO05D003944 4.3e-52 209.5 135 80.0
ECA247G1256 Erigeron canadensis HOM05D003220 ORTHO05D003944 4.3e-52 209.5 125 82.4
MD14G1159300 Malus domestica HOM05D003220 ORTHO05D003944 4.3e-52 209.5 126 84.9
BcaNung07242 Brassica carinata HOM05D003220 ORTHO05D003944 5.7e-52 209.1 125 84.0
Carub.0007s1622 Capsella rubella HOM05D003220 ORTHO05D003944 5.7e-52 209.1 125 84.0
Dinv11156 Davidia involucrata HOM05D003220 ORTHO05D003944 5.7e-52 209.1 129 79.8
Hma1.2p1_1439F.1_g283510 Hydrangea macrophylla HOM05D003220 ORTHO05D003944 5.7e-52 209.1 124 82.3
Oeu054655.1 Olea europaea HOM05D003220 ORTHO05D003944 5.7e-52 209.1 124 83.1
ClCG06G017780 Citrullus lanatus HOM05D003220 ORTHO05D003944 9.7e-52 208.4 122 82.8
CsaV3_1G000670 Cucumis sativus L. HOM05D003220 ORTHO05D003944 9.7e-52 208.4 122 83.6
QL10p004209 Quercus lobata HOM05D003220 ORTHO05D003944 9.7e-52 208.4 125 81.6
BraA03t14626Z Brassica rapa HOM05D003220 ORTHO05D003944 1.3e-51 208.0 125 83.2
Lj1g0011038 Lotus japonicus HOM05D003220 ORTHO05D003944 1.3e-51 208.0 125 80.0
Sed0017817 Sechium edule HOM05D003220 ORTHO05D003944 1.3e-51 208.0 122 83.6
AL7G28350 Arabidopsis lyrata HOM05D003220 ORTHO05D003944 1.6e-51 207.6 125 83.2
A03p55590 Brassica napus HOM05D003220 ORTHO05D003944 1.6e-51 207.6 125 83.2
C07p53830 Brassica napus HOM05D003220 ORTHO05D003944 1.6e-51 207.6 125 83.2
BolC7t45873H Brassica oleracea HOM05D003220 ORTHO05D003944 1.6e-51 207.6 125 83.2
CAN.G1528.7 Capsicum annuum HOM05D003220 ORTHO05D003944 1.6e-51 207.6 121 83.5
Rhsim08G0188400 Rhododendron simsii HOM05D003220 ORTHO05D003944 1.6e-51 207.6 121 85.1
Sp7g22820 Schrenkiella parvula HOM05D003220 ORTHO05D003944 1.6e-51 207.6 125 83.2
HPP92_001262 Vanilla planifolia HOM05D003220 ORTHO05D003944 1.6e-51 207.6 126 79.4
CiPaw.12G040800 Carya illinoinensis HOM05D003220 ORTHO05D003944 2.2e-51 207.2 125 81.6
Glyma.05G046900 Glycine max HOM05D003220 ORTHO05D003944 2.2e-51 207.2 124 83.1
SEGI_40301 Sequoiadendron giganteum HOM05D003220 ORTHO05D003944 2.2e-51 207.2 125 79.2
Aa31LG7G11010 Aethionema arabicum HOM05D003220 ORTHO05D003944 2.8e-51 206.8 125 82.4
AT4G24830 Arabidopsis thaliana HOM05D003220 ORTHO05D003944 4.8e-51 206.1 125 82.4
Cfa018844 Carpinus fangiana HOM05D003220 ORTHO05D003944 4.8e-51 206.1 125 79.2
Rhsim02G0083400 Rhododendron simsii HOM05D003220 ORTHO05D003944 4.8e-51 206.1 121 84.3
BcaC06g32854 Brassica carinata HOM05D003220 ORTHO05D003944 6.3e-51 205.7 124 83.1
Haze_07237 Corylus avellana HOM05D003220 ORTHO05D003944 6.3e-51 205.7 125 80.0
Thhalv10025000m.g Eutrema salsugineum HOM05D003220 ORTHO05D003944 6.3e-51 205.7 125 80.8
CARHR232250 Cardamine hirsuta HOM05D003220 ORTHO05D003944 8.2e-51 205.3 125 81.6
THA.LOC104825013 Tarenaya hassleriana HOM05D003220 ORTHO05D003944 8.2e-51 205.3 125 82.4
ATR1149G068 Amborella trichopoda HOM05D003220 ORTHO05D003944 1.1e-50 204.9 125 80.8
AagrBONN_evm.TU.Sc2ySwM_228.4817 Anthoceros agrestis HOM05D003220 ORTHO05D003944 1.1e-50 204.9 125 80.0
CiPaw.11G009400 Carya illinoinensis HOM05D003220 ORTHO05D003944 1.1e-50 204.9 125 80.8
CBR_g61477 Chara braunii HOM05D003220 ORTHO05D003944 1.1e-50 204.9 127 80.3
Medtr3g088970 Medicago truncatula HOM05D003220 ORTHO05D003944 1.1e-50 204.9 125 78.4
THA.LOC104811595 Tarenaya hassleriana HOM05D003220 ORTHO05D003944 1.1e-50 204.9 125 81.6
Lj1g0021098 Lotus japonicus HOM05D003220 ORTHO05D003944 1.8e-50 204.1 125 78.4
SEGI_19712 Sequoiadendron giganteum HOM05D003220 ORTHO05D003944 2.4e-50 203.8 155 67.1
vmacro05131 Vaccinium macrocarpon HOM05D003220 ORTHO05D003944 2.4e-50 203.8 121 82.6
Lj1g0011796 Lotus japonicus HOM05D003220 ORTHO05D003944 3.1e-50 203.4 124 78.2
Psat5g139800 Pisum sativum HOM05D003220 ORTHO05D003944 3.1e-50 203.4 155 67.1
unitig_750.g28437 Utricularia gibba HOM05D003220 ORTHO05D003944 6.9e-50 202.2 117 84.6
CsaV3_1G009540 Cucumis sativus L. HOM05D003220 ORTHO05D003944 1.2e-49 201.4 125 79.2
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 4.5e-49 199.5 125 78.4
Lsat_1_v5_gn_5_13561 Lactuca sativa HOM05D003220 ORTHO05D003944 4.5e-49 199.5 118 84.7
Pp3c1_33150 Physcomitrium patens HOM05D003220 ORTHO05D003944 5.9e-49 199.1 125 79.2
Ah.03g136360 Amaranthus hybridus HOM05D003220 ORTHO05D003944 7.7e-49 198.7 118 83.1
Cc00_g12840 Coffea canephora HOM05D003220 ORTHO05D003944 1.3e-48 198.0 114 86.8
SMO356G0518 Selaginella moellendorffii HOM05D003220 ORTHO05D003944 3.8e-48 196.4 147 68.0
COL.COLO4_28080 Corchorus olitorius HOM05D003220 ORTHO05D003944 4.2e-47 193.0 113 85.0
Mapoly0038s0028 Marchantia polymorpha HOM05D003220 ORTHO05D003944 1.2e-46 191.4 125 76.0
Eucgr.K02738 Eucalyptus grandis HOM05D003220 ORTHO05D003944 4.3e-44 183.0 125 76.8
SMO356G0112 Selaginella moellendorffii HOM05D003220 ORTHO05D003944 7.4e-44 182.2 121 76.9
Hund19502 Selenicereus undatus HOM05D003220 ORTHO05D003944 7.4e-44 182.2 118 76.3
ClCG03G003660 Citrullus lanatus HOM05D003220 ORTHO05D003944 1.3e-43 181.4 125 75.2
Lj9C477T17 Lonicera japonica HOM05D003220 ORTHO05D003944 2.8e-43 180.3 109 81.7
EL10Ac2g04001 Beta vulgaris HOM05D003220 ORTHO05D003944 4.8e-43 179.5 114 77.2
Lalb_Chr06g0172311 Lupinus albus HOM05D003220 ORTHO05D003944 2.4e-42 177.2 126 73.0
Ca_29978_v3 Cicer arietinum L. HOM05D003220 ORTHO05D003944 4.1e-42 176.4 109 79.8
MBI08_g11776_MAGBIO Magnolia biondii HOM05D003220 ORTHO05D003944 1.2e-41 174.9 100 85.0
arahy.Tifrunner.gnm1.ann1.HUK63J Arachis hypogaea HOM05D003220 ORTHO05D003944 2.0e-41 174.1 104 82.7
arahy.Tifrunner.gnm1.ann1.VD0ABX Arachis hypogaea HOM05D003220 ORTHO05D003944 2.0e-41 174.1 104 82.7
BcaNung07239 Brassica carinata HOM05D003220 ORTHO05D003944 3.8e-40 169.9 102 82.4
SGA_v2.0_scaffold198G41113 Striga asiatica HOM05D003220 ORTHO05D003944 6.5e-40 169.1 101 78.2
TPR.G26144 Trifolium pratense HOM05D003220 ORTHO05D003944 3.2e-39 166.8 98 79.6
Psat2g150200 Pisum sativum HOM05D003220 ORTHO05D003944 3.9e-37 159.8 99 80.8
Pp3c12_4480 Physcomitrium patens HOM05D003220 ORTHO05D003944 4.8e-35 152.9 145 58.6
A08p21550 Brassica napus HOM05D003220 ORTHO05D003944 2.0e-33 147.5 97 75.3
BcaC07g38139 Brassica carinata HOM05D003220 ORTHO05D003944 1.4e-31 141.4 90 76.7
BolC8t48565H Brassica oleracea HOM05D003220 ORTHO05D003944 1.4e-31 141.4 90 76.7
MELO3C026229.2 Cucumis melo HOM05D003220 ORTHO05D003944 2.5e-31 140.6 83 81.9
Cre09.g416050 Chlamydomonas reinhardtii HOM05D003220 ORTHO05D003944 4.2e-31 139.8 121 56.2
PRCOL_00001450 Prasinoderma coloniale HOM05D003220 ORTHO05D003944 3.6e-30 136.7 120 56.7
Rhsim13G0121700 Rhododendron simsii HOM05D003220 ORTHO05D003944 6.7e-29 132.5 138 55.8
Oeu003416.1 Olea europaea HOM05D003220 ORTHO05D010382 6.3e-27 125.9 91 70.3
Cfa022737 Carpinus fangiana HOM05D003220 ORTHO05D003944 4.0e-21 106.7 118 52.5
Dinv04869 Davidia involucrata HOM05D003220 ORTHO05D003944 3.5e-17 93.6 56 75.0
Zm00001eb411740 Zea mays HOM05D003220 ORTHO05D003944 1.3e-16 91.7 125 46.4
Oeu050445.1 Olea europaea HOM05D003220 ORTHO05D003944 7.7e-09 65.9 50 64.0
BcaC07g38166 Brassica carinata HOM05D003220 ORTHO05D003944 3.3e-07 60.5 60 56.7


User provided reference genes

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