Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g06810 Fragaria vesca HOM05D013306 ORTHO05D046474 1.7e-137 493.4 433 100.0
FAN08G2706 Fragaria x ananassa HOM05D013306 ORTHO05D046474 2.0e-85 320.5 176 96.0
FAN03G1480 Fragaria x ananassa HOM05D013306 ORTHO05D035584 9.4e-67 258.5 243 73.3
FvH4_7g10090 Fragaria vesca HOM05D013306 ORTHO05D035584 5.9e-61 239.2 178 78.7
FAN06G0659 Fragaria x ananassa HOM05D001876 ORTHO05D035584 5.9e-61 239.2 169 81.1
FAN21G2243 Fragaria x ananassa HOM05D001876 ORTHO05D002002 3.3e-35 153.7 182 56.0
FvH4_3g41980 Fragaria vesca HOM05D001876 ORTHO05D002002 1.2e-34 151.8 183 56.3
FAN11G3885 Fragaria x ananassa HOM05D001876 ORTHO05D002002 1.2e-34 151.8 183 56.3
FAN25G1930 Fragaria x ananassa HOM05D001876 ORTHO05D002002 2.8e-34 150.6 183 56.3
FAN16G1749 Fragaria x ananassa HOM05D001876 ORTHO05D002002 6.2e-34 149.4 183 56.3
RcHm_v2.0_Chr5g0075171 Rosa chinensis HOM05D001876 ORTHO05D002002 8.1e-34 149.1 182 56.0
FAN11G3414 Fragaria x ananassa HOM05D001876 ORTHO05D002002 7.1e-30 136.0 133 63.9
FvH4_3g42880 Fragaria vesca HOM05D001876 ORTHO05D002002 1.6e-29 134.8 133 63.2
FvH4_4g01880 Fragaria vesca HOM05D001876 ORTHO05D002002 3.0e-28 130.6 121 63.6
FAN12G4233 Fragaria x ananassa HOM05D001876 ORTHO05D045887 9.6e-27 125.6 121 62.0
FvH4_7g20220 Fragaria vesca HOM05D001876 ORTHO05D002002 8.9e-25 119.0 177 46.9
MD03G1039800 Malus domestica HOM05D001876 ORTHO05D002002 2.9e-23 114.0 184 45.7
MD11G1041300 Malus domestica HOM05D001876 ORTHO05D002002 4.9e-23 113.2 183 45.9
FAN21G1841 Fragaria x ananassa HOM05D001876 ORTHO05D002002 6.4e-23 112.8 163 47.2
FAN25G3337 Fragaria x ananassa HOM05D001876 ORTHO05D002002 4.6e-21 106.7 108 61.1
FvH4_3g42840 Fragaria vesca HOM05D001876 ORTHO05D002002 7.3e-19 99.4 107 58.9
Prupe.6G032100 Prunus persica HOM05D001876 ORTHO05D002002 6.2e-18 96.3 182 43.4
Cfa016942 Carpinus fangiana HOM05D001876 ORTHO05D002002 2.1e-13 81.3 188 37.8
Haze_09897 Corylus avellana HOM05D001876 ORTHO05D002002 2.1e-13 81.3 188 37.2
RcHm_v2.0_Chr4g0407801 Rosa chinensis HOM05D000005 ORTHO05D000012 6.0e-13 79.7 107 50.5
FAN21G3992 Fragaria x ananassa HOM05D001876 ORTHO05D002002 5.1e-12 76.6 58 75.9
QL08p001531 Quercus lobata HOM05D001876 ORTHO05D002002 5.1e-12 76.6 170 40.0
FvH4_3g42790 Fragaria vesca HOM05D001876 ORTHO05D002002 6.6e-12 76.3 52 82.7
Duzib268G1004 Durio zibethinus HOM05D001876 ORTHO05D002002 1.9e-11 74.7 186 36.6
CiPaw.12G141800 Carya illinoinensis HOM05D001876 ORTHO05D002002 2.5e-11 74.3 181 35.9
CANSAT11G0621 Cannabis sativa HOM05D001876 ORTHO05D002002 5.6e-11 73.2 187 38.5
Manes.01G005000 Manihot esculenta HOM05D001876 ORTHO05D002002 2.1e-10 71.2 187 35.8
RcHm_v2.0_Chr4g0389201 Rosa chinensis HOM05D001876 ORTHO05D002002 4.8e-10 70.1 60 66.7
Dinv40896 Davidia involucrata HOM05D001876 ORTHO05D002002 8.1e-10 69.3 185 35.7
Duzib170G0551 Durio zibethinus HOM05D001876 ORTHO05D002002 8.1e-10 69.3 182 35.7
Actinidia30365 Actinidia chinensis HOM05D001876 ORTHO05D002002 1.1e-09 68.9 168 36.9
Ciclev10007261m.g Citrus clementina HOM05D001876 ORTHO05D002002 1.1e-09 68.9 180 36.1
Thecc.07G005200 Theobroma cacao HOM05D001876 ORTHO05D002002 1.1e-09 68.9 180 34.4
Nitab4.5_0000152g0190 Nicotiana tabacum HOM05D001876 ORTHO05D002002 2.4e-09 67.8 186 37.1
Gorai.004G034200 Gossypium raimondii HOM05D001876 ORTHO05D002002 3.1e-09 67.4 180 34.4
Rhsim06G0234000 Rhododendron simsii HOM05D001876 ORTHO05D002002 3.1e-09 67.4 172 33.1
Manes.05G206100 Manihot esculenta HOM05D001876 ORTHO05D002002 4.0e-09 67.0 142 36.6
Gohir.D08G036200 Gossypium hirsutum HOM05D001876 ORTHO05D002002 1.5e-08 65.1 180 33.3
vmacro11629 Vaccinium macrocarpon HOM05D001876 ORTHO05D002002 1.5e-08 65.1 176 37.5
Nitab4.5_0001303g0100 Nicotiana tabacum HOM05D001876 ORTHO05D002002 2.0e-08 64.7 186 36.6
COL.COLO4_07762 Corchorus olitorius HOM05D001876 ORTHO05D002002 2.6e-08 64.3 180 34.4
Duzib213G0425 Durio zibethinus HOM05D001876 ORTHO05D002002 5.8e-08 63.2 178 32.0
FvH4_7g10420 Fragaria vesca HOM05D001876 ORTHO05D019192 5.8e-08 63.2 62 64.5
Actinidia03661 Actinidia chinensis HOM05D001876 ORTHO05D002002 9.9e-08 62.4 182 34.6
Gohir.A08G025700 Gossypium hirsutum HOM05D001876 ORTHO05D002002 9.9e-08 62.4 180 32.8
Hma1.2p1_0193F.1_g084140 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 1.7e-07 61.6 176 34.7
Hma1.2p1_2995F.1_g331450 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 1.7e-07 61.6 176 34.7
Ca_14851_v3 Cicer arietinum L. HOM05D001876 ORTHO05D002002 3.8e-07 60.5 182 35.2
FAN01G0741 Fragaria x ananassa HOM05D001876 ORTHO05D019192 3.8e-07 60.5 238 32.4
Lj1A897T44 Lonicera japonica HOM05D001876 ORTHO05D002002 3.8e-07 60.5 183 34.4
FAN06G0414 Fragaria x ananassa HOM05D001876 ORTHO05D019192 4.9e-07 60.1 230 32.6
CSS0030826 Camellia sinensis var. sinensis HOM05D001876 ORTHO05D002002 6.4e-07 59.7 180 32.2
Potri.001G469500 Populus trichocarpa HOM05D001876 ORTHO05D002002 6.4e-07 59.7 160 34.4
Cc05_g15500 Coffea canephora HOM05D001876 ORTHO05D002002 8.4e-07 59.3 149 35.6
Psat5g163240 Pisum sativum HOM05D001876 ORTHO05D002002 1.1e-06 58.9 177 34.5
Sabra16G0318400 Salix brachista HOM05D001876 ORTHO05D002002 1.1e-06 58.9 174 36.2
Glyma.08G337200 Glycine max HOM05D001876 ORTHO05D002002 1.9e-06 58.2 190 31.6
Nitab4.5_0001622g0060 Nicotiana tabacum HOM05D001876 ORTHO05D002002 1.9e-06 58.2 185 33.5
FAN10G0434 Fragaria x ananassa HOM05D030657 ORTHO05D019192 2.4e-06 57.8 55 69.1
FAN10G1274 Fragaria x ananassa HOM05D030657 ORTHO05D019192 2.4e-06 57.8 55 69.1
Medtr3g061160 Medicago truncatula HOM05D001876 ORTHO05D002002 2.4e-06 57.8 178 34.3
ClCG10G004140 Citrullus lanatus HOM05D001876 ORTHO05D002002 3.2e-06 57.4 117 36.8
Dinv10376 Davidia involucrata HOM05D001876 ORTHO05D002002 3.2e-06 57.4 203 33.5
Phvul.006G060500 Phaseolus vulgaris HOM05D001876 ORTHO05D002002 3.2e-06 57.4 185 32.4
SalBow8G1221 Salvia bowleyana HOM05D001876 ORTHO05D002002 3.2e-06 57.4 157 32.5
SalBow8G5543 Salvia bowleyana HOM05D001876 ORTHO05D002002 3.2e-06 57.4 157 32.5
Nn1g07691 Nelumbo nucifera HOM05D001876 ORTHO05D002002 4.2e-06 57.0 186 31.7
Potri.011G166400 Populus trichocarpa HOM05D001876 ORTHO05D002002 5.5e-06 56.6 185 31.4


User provided reference genes

Program Settings