Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g06690 Fragaria vesca HOM05D005537 ORTHO05D006776 3.2e-277 958.0 554 100.0
FAN12G0761 Fragaria x ananassa HOM05D005537 ORTHO05D006776 6.0e-276 953.7 554 99.5
FAN22G0220 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.1e-268 928.7 554 96.8
FAN17G0445 Fragaria x ananassa HOM05D005537 ORTHO05D006776 3.9e-267 924.5 552 92.0
FAN07G2345 Fragaria x ananassa HOM05D005537 ORTHO05D006776 5.3e-264 914.1 557 93.0
Prupe.1G069700 Prunus persica HOM05D005537 ORTHO05D006776 1.6e-196 689.9 530 69.1
MD16G1242600 Malus domestica HOM05D005537 ORTHO05D006776 2.4e-187 659.4 530 66.2
MD13G1237200 Malus domestica HOM05D005537 ORTHO05D006776 2.1e-183 646.4 532 65.4
Haze_22074 Corylus avellana HOM05D005537 ORTHO05D006776 4.0e-163 578.9 531 61.4
Cfa013489 Carpinus fangiana HOM05D005537 ORTHO05D006776 1.3e-158 563.9 531 60.1
CiPaw.07G200800 Carya illinoinensis HOM05D005537 ORTHO05D006776 4.3e-157 558.9 532 60.0
Thecc.08G084500 Theobroma cacao HOM05D005537 ORTHO05D006776 2.1e-151 540.0 546 56.6
Ciclev10010385m.g Citrus clementina HOM05D005537 ORTHO05D006776 2.7e-151 539.7 549 57.9
COL.COLO4_28459 Corchorus olitorius HOM05D005537 ORTHO05D006776 1.0e-150 537.7 544 56.2
RcHm_v2.0_Chr4g0398601 Rosa chinensis HOM05D005537 ORTHO05D006776 6.7e-150 535.0 313 85.3
QL11p009893 Quercus lobata HOM05D005537 ORTHO05D006776 8.2e-148 528.1 556 59.2
Manes.02G080100 Manihot esculenta HOM05D005537 ORTHO05D006776 1.8e-147 526.9 536 56.7
Gohir.A06G025900 Gossypium hirsutum HOM05D005537 ORTHO05D006776 5.3e-147 525.4 541 53.6
Duzib093G2104 Durio zibethinus HOM05D005537 ORTHO05D006776 7.7e-146 521.5 538 56.1
Gohir.D06G023000 Gossypium hirsutum HOM05D005537 ORTHO05D006776 1.3e-145 520.8 541 53.2
Gorai.010G027600 Gossypium raimondii HOM05D005537 ORTHO05D006776 5.0e-145 518.8 544 54.0
MELO3C003946.2 Cucumis melo HOM05D005537 ORTHO05D006776 6.5e-145 518.5 537 54.6
arahy.Tifrunner.gnm1.ann1.W452X0 Arachis hypogaea HOM05D005537 ORTHO05D006776 1.2e-143 514.2 553 53.3
CANSAT01G2612 Cannabis sativa HOM05D005537 ORTHO05D006776 1.2e-143 514.2 535 53.5
Dinv25489 Davidia involucrata HOM05D005537 ORTHO05D006776 1.6e-143 513.8 537 52.7
VMungo1215G0900 Vigna mungo HOM05D005537 ORTHO05D006776 2.7e-143 513.1 553 52.8
ClCG11G011540 Citrullus lanatus HOM05D005537 ORTHO05D006776 6.1e-143 511.9 546 51.3
Atru.chr2.2727 Acer truncatum HOM05D005537 ORTHO05D006776 3.0e-142 509.6 537 53.8
arahy.Tifrunner.gnm1.ann1.HQKU7C Arachis hypogaea HOM05D005537 ORTHO05D006776 3.3e-141 506.1 550 52.5
Duzib041G0776 Durio zibethinus HOM05D005537 ORTHO05D006776 9.7e-141 504.6 543 50.8
PGR044G0610 Punica granatum HOM05D005537 ORTHO05D006776 2.2e-140 503.4 540 56.3
TAR624G0592 Trochodendron aralioides HOM05D005537 ORTHO05D006776 1.1e-139 501.1 536 55.8
Sed0009431 Sechium edule HOM05D005537 ORTHO05D006776 1.8e-139 500.4 537 56.1
Glyma.13G103200 Glycine max HOM05D005537 ORTHO05D006776 9.1e-139 498.0 542 53.5
Gorai.002G136300 Gossypium raimondii HOM05D005537 ORTHO05D006776 2.0e-138 496.9 537 49.9
TWI63G1753 Tripterygium wilfordii HOM05D005537 ORTHO05D006776 1.3e-137 494.2 578 50.0
THA.LOC104799619 Tarenaya hassleriana HOM05D005537 ORTHO05D006776 2.2e-137 493.4 537 50.3
Sed0014380 Sechium edule HOM05D005537 ORTHO05D006776 7.2e-136 488.4 543 50.1
Potri.012G036500 Populus trichocarpa HOM05D005537 ORTHO05D006776 5.1e-134 482.3 536 50.2
CSS0045027 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 2.6e-133 479.9 544 52.9
Lalb_Chr13g0299751 Lupinus albus HOM05D005537 ORTHO05D006776 5.7e-133 478.8 536 53.5
CiPaw.08G029800 Carya illinoinensis HOM05D005537 ORTHO05D006776 7.4e-133 478.4 483 54.5
CSS0042006 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 9.7e-133 478.0 537 52.9
Sabra12G0025000 Salix brachista HOM05D005537 ORTHO05D006776 3.7e-132 476.1 536 49.3
TPR.G37121 Trifolium pratense HOM05D005537 ORTHO05D006776 4.8e-132 475.7 543 55.4
ECA233G0023 Erigeron canadensis HOM05D005537 ORTHO05D006776 8.2e-132 474.9 535 54.2
Lju50A4T51 Lonicera japonica HOM05D005537 ORTHO05D006776 7.0e-131 471.9 525 51.8
Gohir.A01G123800 Gossypium hirsutum HOM05D005537 ORTHO05D006776 1.5e-130 470.7 537 49.3
Ca_21044_v3 Cicer arietinum L. HOM05D005537 ORTHO05D006776 7.7e-130 468.4 538 51.1
Medtr4g133100 Medicago truncatula HOM05D005537 ORTHO05D006776 2.9e-129 466.5 541 54.2
Sabra15G0023400 Salix brachista HOM05D005537 ORTHO05D006776 5.0e-129 465.7 542 53.9
vmacro19325 Vaccinium macrocarpon HOM05D005537 ORTHO05D006776 6.5e-129 465.3 539 48.6
Eucgr.C02216 Eucalyptus grandis HOM05D005537 ORTHO05D006776 8.5e-129 464.9 538 54.1
Cpa.g.sc115.49 Carica papaya HOM05D005537 ORTHO05D006776 1.2e-127 461.1 497 50.1
Lj2g0020928 Lotus japonicus HOM05D005537 ORTHO05D006776 2.7e-127 459.9 548 52.6
CARHR192210 Cardamine hirsuta HOM05D005537 ORTHO05D006776 4.7e-127 459.1 532 47.6
Aa31LG1G14080 Aethionema arabicum HOM05D005537 ORTHO05D006776 6.1e-127 458.8 535 48.0
Psat4g004960 Pisum sativum HOM05D005537 ORTHO05D006776 2.3e-126 456.8 537 54.6
BcaB08g36512 Brassica carinata HOM05D005537 ORTHO05D006776 5.2e-126 455.7 539 49.2
HanXRQChr13g0401171 Helianthus annuus HOM05D005537 ORTHO05D006776 5.2e-126 455.7 540 50.7
BcaC04g19447 Brassica carinata HOM05D005537 ORTHO05D006776 1.1e-125 454.5 537 48.0
AL6G32140 Arabidopsis lyrata HOM05D005537 ORTHO05D006776 3.3e-125 453.0 533 50.1
BolC9t58429H Brassica oleracea HOM05D005537 ORTHO05D006776 4.4e-125 452.6 537 48.0
Thhalv10013208m.g Eutrema salsugineum HOM05D005537 ORTHO05D006776 4.4e-125 452.6 532 46.8
RhsimUnG0132200 Rhododendron simsii HOM05D005537 ORTHO05D006776 4.4e-125 452.6 538 48.5
A10p19410 Brassica napus HOM05D005537 ORTHO05D006776 5.7e-125 452.2 538 47.8
BraA10t44018Z Brassica rapa HOM05D005537 ORTHO05D006776 5.7e-125 452.2 538 47.8
C09p55630 Brassica napus HOM05D005537 ORTHO05D006776 9.7e-125 451.4 537 47.7
AT5G20600 Arabidopsis thaliana HOM05D005537 ORTHO05D006776 1.3e-124 451.1 526 46.6
Rhsim08G0162000 Rhododendron simsii HOM05D005537 ORTHO05D006776 2.2e-124 450.3 538 48.3
Sp6g23880 Schrenkiella parvula HOM05D005537 ORTHO05D006776 1.1e-123 448.0 533 46.0
Carub.0006s1893 Capsella rubella HOM05D005537 ORTHO05D006776 1.6e-122 444.1 532 45.9
Lsat_1_v5_gn_6_25660 Lactuca sativa HOM05D005537 ORTHO05D006776 5.9e-122 442.2 531 51.6
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.2e-121 440.3 526 46.2
Sc18g0003000 Simmondsia chinensis HOM05D005537 ORTHO05D006776 1.0e-118 431.4 535 51.0
Solyc07g017940.1 Solanum lycopersicum HOM05D005537 ORTHO05D006776 1.4e-118 431.0 545 53.4
Cc06_g13120 Coffea canephora HOM05D005537 ORTHO05D006776 1.8e-118 430.6 551 51.5
Peaxi162Scf00231g10125 Petunia axillaris HOM05D005537 ORTHO05D006776 5.2e-118 429.1 553 48.8
DCAR_017989 Daucus carota HOM05D005537 ORTHO05D006776 7.5e-117 425.2 583 44.4
PSO063G7542 Papaver somniferum HOM05D005537 ORTHO05D006776 9.7e-117 424.9 523 51.1
Sopen07g006800 Solanum pennellii HOM05D005537 ORTHO05D006776 1.7e-116 424.1 550 52.7
CDE05G3054 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 2.2e-116 423.7 551 45.2
Nitab4.5_0000055g0260 Nicotiana tabacum HOM05D005537 ORTHO05D006776 2.2e-116 423.7 576 46.9
PGSC0003DMG400004098 Solanum tuberosum HOM05D005537 ORTHO05D006776 4.8e-116 422.5 552 53.8
Aqoxy5G04373 Aquilegia oxysepala HOM05D005537 ORTHO05D006776 2.4e-115 420.2 545 51.0
CDE05G2659 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 1.6e-114 417.5 540 44.8
Gohir.D01G111500 Gossypium hirsutum HOM05D005537 ORTHO05D006776 2.7e-114 416.8 468 48.1
SHI03078 Sapria himalayana HOM05D005537 ORTHO05D006776 5.9e-114 415.6 548 49.6
PSO170G0047 Papaver somniferum HOM05D005537 ORTHO05D006776 5.0e-113 412.5 519 49.7
Nitab4.5_0004772g0040 Nicotiana tabacum HOM05D005537 ORTHO05D006776 9.4e-112 408.3 566 46.5
MSTRG.26216 Avicennia marina HOM05D005537 ORTHO05D006776 1.6e-111 407.5 548 47.1
Migut.K00238 Erythranthe guttata HOM05D005537 ORTHO05D006776 2.1e-111 407.1 537 49.9
SGA_v2.0_scaffold12G06075 Striga asiatica HOM05D005537 ORTHO05D006776 1.8e-110 404.1 547 48.4
Nn8g40421 Nelumbo nucifera HOM05D005537 ORTHO05D006776 2.6e-109 400.2 550 45.8
Ah.09g230210 Amaranthus hybridus HOM05D005537 ORTHO05D006776 5.7e-109 399.1 548 46.0
MBI14_g19455_MAGBIO Magnolia biondii HOM05D005537 ORTHO05D006776 1.3e-108 397.9 487 53.0
SGA_v2.0_scaffold17G07935 Striga asiatica HOM05D005537 ORTHO05D006776 6.3e-108 395.6 550 46.0
CAN.G1186.23 Capsicum annuum HOM05D005537 ORTHO05D006776 4.2e-104 382.9 557 47.4
AUR62021325 Chenopodium quinoa HOM05D005537 ORTHO05D006776 5.5e-104 382.5 533 43.3
CsaV3_2G008990 Cucumis sativus L. HOM05D005537 ORTHO05D006776 7.2e-104 382.1 306 59.5
unitig_899.g15473 Utricularia gibba HOM05D005537 ORTHO05D006776 1.5e-101 374.4 535 43.4
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 3.2e-99 366.7 522 41.8
HPP92_018575 Vanilla planifolia HOM05D005537 ORTHO05D006776 4.5e-98 362.8 562 42.7
A03p10160 Brassica napus HOM05D005537 ORTHO05D006776 5.0e-97 359.4 493 41.6
Os04g0658600 Oryza sativa ssp. japonica HOM05D005537 ORTHO05D006776 5.6e-96 355.9 539 48.4
Psat2g005880 Pisum sativum HOM05D005537 ORTHO05D006776 1.0e-94 351.7 526 42.0
Actinidia01575 Actinidia chinensis HOM05D005537 ORTHO05D006776 7.5e-93 345.5 553 42.9
TPR.G1254 Trifolium pratense HOM05D005537 ORTHO05D006776 2.4e-91 340.5 528 42.0
Psat2g005840 Pisum sativum HOM05D005537 ORTHO05D006776 3.5e-90 336.7 527 42.1
SEGI_41129 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 5.0e-89 332.8 624 39.9
Zm00001eb067650 Zea mays HOM05D005537 ORTHO05D006776 3.3e-88 330.1 547 43.1
Lju432C4G13 Lonicera japonica HOM05D005537 ORTHO05D006776 1.6e-87 327.8 474 41.4
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 3.7e-84 316.6 276 57.2
ATR0580G047 Amborella trichopoda HOM05D005537 ORTHO05D006776 1.9e-83 314.3 692 36.1
BcaB01g04778 Brassica carinata HOM05D005537 ORTHO05D006776 3.0e-73 280.4 517 35.6
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 5.8e-69 266.2 423 39.2
SEGI_27163 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 8.4e-68 262.3 553 33.1
Mapoly0006s0254 Marchantia polymorpha HOM05D005537 ORTHO05D006776 3.2e-67 260.4 597 32.3
BraA03t10326Z Brassica rapa HOM05D005537 ORTHO05D006776 7.1e-67 259.2 210 60.0
unitig_746.g26559 Utricularia gibba HOM05D005537 ORTHO05D006776 5.1e-65 253.1 266 50.0
Zm00001eb432550 Zea mays HOM05D005537 ORTHO05D006776 1.5e-64 251.5 497 40.4
Pp3c12_970 Physcomitrium patens HOM05D005537 ORTHO05D006776 1.0e-57 228.8 638 29.3
EL10Ac8g18309 Beta vulgaris HOM05D005537 ORTHO05D006776 5.1e-57 226.5 412 43.4
Pp3c17_1280 Physcomitrium patens HOM05D005537 ORTHO05D006776 1.5e-56 224.9 277 39.7
SMO012G0033 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 9.0e-54 215.7 532 34.6
FvH4_5g34681 Fragaria vesca HOM05D005537 ORTHO05D006776 3.8e-52 210.3 137 79.6
AagrBONN_evm.TU.Sc2ySwM_228.2028 Anthoceros agrestis HOM05D005537 ORTHO05D006776 6.0e-50 203.0 644 28.4
MELO3C020712.2 Cucumis melo HOM05D005537 ORTHO05D006776 6.2e-47 193.0 180 52.8
FvH4_2g25020 Fragaria vesca HOM05D005537 ORTHO05D006776 2.1e-42 177.9 88 96.6
FAN24G0683 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.1e-42 177.9 88 96.6
SEGI_03037 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 1.5e-40 171.8 547 27.4
Cc00_g32040 Coffea canephora HOM05D005537 ORTHO05D006776 1.8e-38 164.9 149 55.7
CBR_g32208 Chara braunii HOM05D005537 ORTHO05D006776 1.5e-37 161.8 291 34.4
SMO172G0175 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 4.2e-35 153.7 476 27.3
Cre01.g019200 Chlamydomonas reinhardtii HOM05D005537 ORTHO05D006776 2.7e-34 151.0 273 34.1
Glyma.17G055832 Glycine max HOM05D005537 ORTHO05D006776 5.1e-33 146.7 129 62.8
Oeu009853.2 Olea europaea HOM05D005537 ORTHO05D006776 3.8e-28 130.6 152 50.7
PRCOL_00002161 Prasinoderma coloniale HOM05D005537 ORTHO05D006776 2.5e-24 117.9 302 30.1
MCO12G389 Micromonas commoda HOM05D005537 ORTHO05D006776 8.5e-20 102.8 164 35.4
unitig_746.g26560 Utricularia gibba HOM05D005537 ORTHO05D006776 1.1e-16 92.4 114 45.6
FAN08G1254 Fragaria x ananassa HOM05D015922 ORTHO05D014694 6.7e-09 66.6 52 65.4
FAN19G3061 Fragaria x ananassa HOM05D015922 ORTHO05D014694 6.7e-09 66.6 52 65.4
FAN25G2196 Fragaria x ananassa HOM05D015922 ORTHO05D014694 6.7e-09 66.6 52 65.4
MSTRG.6231 Avicennia marina HOM05D005537 ORTHO05D006776 2.6e-08 64.7 73 46.6
FAN08G1621 Fragaria x ananassa HOM05D015922 ORTHO05D014694 1.8e-06 58.5 51 60.8
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 9.1e-06 56.2 110 33.6


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