Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g40010 Fragaria vesca HOM05D000007 ORTHO05D035779 5.7e-138 494.2 241 100.0
FAN20G3190 Fragaria x ananassa HOM05D000007 ORTHO05D035779 4.7e-100 368.2 313 65.2
FAN27G2322 Fragaria x ananassa HOM05D000007 ORTHO05D035779 3.1e-99 365.5 315 63.5
FAN15G1033 Fragaria x ananassa HOM05D000007 ORTHO05D015114 2.6e-58 229.6 121 91.7
Prupe.1G187600 Prunus persica HOM05D000007 ORTHO05D000676 5.2e-22 109.0 154 40.9
RcHm_v2.0_Chr4g0412631 Rosa chinensis HOM05D000007 ORTHO05D000521 5.7e-21 105.5 344 28.8
RcHm_v2.0_Chr6g0300741 Rosa chinensis HOM05D000007 ORTHO05D000521 2.8e-20 103.2 76 67.1
Prupe.1G170100 Prunus persica HOM05D000007 ORTHO05D000521 2.4e-19 100.1 168 43.5
MD04G1021100 Malus domestica HOM05D000007 ORTHO05D000521 5.3e-19 99.0 169 42.6
Prupe.1G168000 Prunus persica HOM05D000007 ORTHO05D000521 4.5e-18 95.9 165 43.6
RcHm_v2.0_Chr3g0474061 Rosa chinensis HOM05D000007 ORTHO05D015114 4.5e-18 95.9 182 40.7
MD04G1018800 Malus domestica HOM05D000007 ORTHO05D000521 1.0e-17 94.7 165 39.4
RcHm_v2.0_Chr4g0412781 Rosa chinensis HOM05D000007 ORTHO05D000521 1.7e-17 94.0 207 39.1
FAN12G0768 Fragaria x ananassa HOM05D000007 ORTHO05D000521 2.2e-17 93.6 188 38.3
Prupe.1G170000 Prunus persica HOM05D000007 ORTHO05D000521 1.1e-16 91.3 163 39.9
MD04G1020500 Malus domestica HOM05D000007 ORTHO05D000521 1.5e-16 90.9 161 38.5
RcHm_v2.0_Chr4g0412831 Rosa chinensis HOM05D000007 ORTHO05D000521 1.9e-16 90.5 168 36.9
Prupe.1G167900 Prunus persica HOM05D000007 ORTHO05D000521 5.5e-16 89.0 157 40.8
FvH4_4g13040 Fragaria vesca HOM05D000007 ORTHO05D000521 1.0e-14 84.7 204 35.3
FAN12G3286 Fragaria x ananassa HOM05D000007 ORTHO05D000521 4.0e-14 82.8 204 34.8
RcHm_v2.0_Chr4g0412791 Rosa chinensis HOM05D000007 ORTHO05D000521 8.8e-14 81.6 120 41.7
FvH4_7g33811 Fragaria vesca HOM05D000007 ORTHO05D000017 3.3e-13 79.7 171 35.1
FAN01G2930 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.3e-13 79.7 171 35.1
Prupe.1G169800 Prunus persica HOM05D000007 ORTHO05D000521 3.7e-12 76.3 208 32.2
FAN12G3766 Fragaria x ananassa HOM05D000234 ORTHO05D001258 8.2e-12 75.1 193 32.6
RcHm_v2.0_Chr4g0413271 Rosa chinensis HOM05D000007 ORTHO05D000521 1.1e-11 74.7 166 36.1
FvH4_6g39874 Fragaria vesca HOM05D000007 ORTHO05D000676 1.2e-10 71.2 174 34.5
FAN21G3512 Fragaria x ananassa HOM05D000007 ORTHO05D000521 2.0e-10 70.5 157 35.7
FAN07G1646 Fragaria x ananassa HOM05D000007 ORTHO05D000521 1.3e-09 67.8 163 36.2
Prupe.1G167600 Prunus persica HOM05D000007 ORTHO05D000017 1.3e-09 67.8 157 36.3
QL01p045544 Quercus lobata HOM05D000007 ORTHO05D000521 1.7e-09 67.4 153 35.9
FvH4_4g13100 Fragaria vesca HOM05D000007 ORTHO05D000521 2.2e-09 67.0 163 36.2
FAN14G3925 Fragaria x ananassa HOM05D000007 ORTHO05D000521 2.2e-09 67.0 184 33.2
RcHm_v2.0_Chr4g0412861 Rosa chinensis HOM05D000007 ORTHO05D000521 5.0e-09 65.9 164 37.8
FAN21G1234 Fragaria x ananassa HOM05D000007 ORTHO05D015114 6.5e-09 65.5 152 34.2
CiPaw.07G080600 Carya illinoinensis HOM05D000007 ORTHO05D000521 1.1e-08 64.7 153 33.3
RcHm_v2.0_Chr4g0409251 Rosa chinensis HOM05D000007 ORTHO05D000521 1.1e-08 64.7 204 32.4
FvH4_3g34920 Fragaria vesca HOM05D000007 ORTHO05D000521 1.9e-08 63.9 155 35.5
FAN11G1026 Fragaria x ananassa HOM05D000007 ORTHO05D000521 4.2e-08 62.8 155 34.8
FvH4_4g13090 Fragaria vesca HOM05D000007 ORTHO05D000521 1.2e-07 61.2 134 32.1
Prupe.1G169600 Prunus persica HOM05D000007 ORTHO05D000017 2.7e-07 60.1 162 30.2
RcHm_v2.0_Chr3g0494781 Rosa chinensis HOM05D000007 ORTHO05D025390 2.7e-07 60.1 97 48.5
PSO675G0029 Papaver somniferum HOM05D000007 ORTHO05D000676 8.0e-07 58.5 174 30.5
RcHm_v2.0_Chr3g0474071 Rosa chinensis HOM05D000007 ORTHO05D025390 8.0e-07 58.5 94 47.9
Prupe.1G167800 Prunus persica HOM05D000007 ORTHO05D000521 1.0e-06 58.2 81 45.7
MD04G1020000 Malus domestica HOM05D000007 ORTHO05D000521 1.4e-06 57.8 146 37.0
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 1.8e-06 57.4 150 32.0
FAN06G1445 Fragaria x ananassa HOM05D019588 ORTHO05D015114 1.8e-06 57.4 145 33.8
BcaC01g03836 Brassica carinata HOM05D001897 ORTHO05D001953 4.0e-06 56.2 175 29.1
C03p48110 Brassica napus HOM05D000007 ORTHO05D000017 4.0e-06 56.2 175 29.1
COL.COLO4_15938 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.0e-06 56.2 172 27.3
RcHm_v2.0_Chr4g0412771 Rosa chinensis HOM05D000007 ORTHO05D000521 6.8e-06 55.5 64 42.2
FAN11G0805 Fragaria x ananassa HOM05D000007 ORTHO05D000521 8.8e-06 55.1 155 33.5


User provided reference genes

Program Settings