Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 0.0e+00 1080.5 651 100.0
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 4.9e-293 1010.7 655 92.2
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 9.3e-276 953.4 534 93.8
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 1.9e-273 945.7 508 95.5
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 6.2e-256 887.5 518 87.6
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 6.5e-237 824.3 590 74.1
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 2.9e-229 798.9 589 73.2
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 3.8e-229 798.5 581 73.8
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 2.2e-200 703.0 607 63.9
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 2.8e-195 686.0 601 63.4
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 8.0e-195 684.5 608 63.3
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 4.9e-192 675.2 599 61.6
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.6e-190 668.7 590 64.1
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 3.9e-189 665.6 607 61.0
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 5.0e-189 665.2 603 60.9
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 5.0e-189 665.2 603 60.9
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 2.5e-188 662.9 610 62.3
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 2.8e-187 659.4 604 60.6
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 2.3e-186 656.4 574 62.7
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 2.3e-186 656.4 599 61.3
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 1.5e-185 653.7 607 61.0
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 6.4e-184 648.3 608 59.9
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 3.5e-182 642.5 604 60.3
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 4.6e-182 642.1 596 61.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.1e-180 637.5 582 63.1
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.9e-180 636.7 590 61.4
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 2.5e-180 636.3 564 63.1
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 5.6e-180 635.2 608 59.4
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.1e-179 633.3 639 57.3
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 3.1e-178 629.4 603 59.4
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 4.0e-178 629.0 589 60.4
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 5.2e-178 628.6 572 62.1
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.3e-176 624.0 580 62.8
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 4.9e-176 622.1 586 59.7
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.1e-175 620.9 611 58.4
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 2.4e-175 619.8 553 62.9
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 3.2e-175 619.4 617 57.9
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 3.5e-174 615.9 602 60.0
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 4.6e-174 615.5 605 58.3
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 6.0e-174 615.1 603 58.7
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.7e-173 613.6 624 56.7
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 3.3e-172 609.4 617 56.6
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 9.5e-172 607.8 582 60.8
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 6.2e-171 605.1 574 59.6
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 4.0e-170 602.4 552 59.4
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 6.8e-170 601.7 556 59.7
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 2.6e-169 599.7 608 57.2
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 3.4e-169 599.4 611 56.8
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 9.9e-169 597.8 560 60.5
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.3e-168 597.4 611 56.8
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 2.2e-168 596.7 592 60.6
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.4e-167 594.0 613 56.4
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 4.1e-167 592.4 587 57.6
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 3.5e-166 589.3 572 59.1
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 4.6e-166 589.0 584 57.4
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 3.0e-165 586.3 566 58.7
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 4.3e-164 582.4 558 59.7
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 4.3e-164 582.4 555 59.6
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 4.3e-164 582.4 557 59.6
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.6e-164 582.0 562 59.4
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 9.6e-164 581.3 581 58.2
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 1.6e-163 580.5 589 56.4
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 3.6e-163 579.3 557 59.4
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.7e-163 578.9 567 59.8
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 4.7e-163 578.9 557 59.6
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 8.1e-163 578.2 596 57.2
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 3.1e-162 576.2 587 57.1
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 7.6e-161 571.6 587 56.7
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 6.4e-160 568.5 564 58.0
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 1.2e-158 564.3 562 57.3
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 1.6e-158 563.9 557 57.3
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.1e-158 563.5 604 54.3
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 2.7e-158 563.1 607 54.2
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 3.5e-158 562.8 547 57.6
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 7.8e-158 561.6 578 55.9
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 2.3e-157 560.1 554 57.2
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 1.1e-156 557.8 583 56.8
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 1.3e-155 554.3 542 59.0
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 1.4e-154 550.8 589 54.7
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 1.4e-154 550.8 583 55.2
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 2.4e-154 550.1 550 58.5
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 6.9e-154 548.5 558 55.9
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 9.0e-154 548.1 558 55.9
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 9.0e-154 548.1 582 55.3
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.4e-153 546.2 566 56.0
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.7e-152 543.9 604 54.8
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.4e-151 540.8 556 55.4
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 7.1e-151 538.5 595 54.5
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 7.1e-151 538.5 560 55.7
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 1.2e-150 537.7 569 52.7
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.1e-150 537.0 564 54.3
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 2.7e-150 536.6 558 55.4
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 1.0e-149 534.6 570 52.8
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 8.7e-149 531.6 562 55.2
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 2.8e-147 526.6 543 56.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.7e-147 526.2 597 54.4
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 3.7e-147 526.2 595 55.0
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.3e-146 522.3 553 54.8
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 3.8e-144 516.2 574 51.7
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 7.9e-142 508.4 554 55.8
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 1.3e-139 501.1 556 55.4
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.3e-136 491.1 617 49.1
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 3.1e-130 469.9 614 49.2
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.4e-122 444.5 626 44.2
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 5.3e-122 442.6 556 50.2
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 3.8e-120 436.4 528 53.6
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 5.5e-119 432.6 552 48.2
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.5e-119 432.6 462 54.1
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 2.7e-110 403.7 326 66.6
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 2.5e-103 380.6 351 61.0
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 2.7e-102 377.1 389 56.3
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 3.6e-102 376.7 322 63.0
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 4.2e-95 353.2 555 41.3
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 4.7e-94 349.7 321 60.7
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 3.1e-90 337.0 479 44.5
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 2.9e-88 330.5 313 59.1
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.6e-78 298.1 846 31.1
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 8.0e-78 295.8 821 31.2
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 3.7e-67 260.4 254 59.4
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 8.3e-67 259.2 373 49.1
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 8.6e-64 249.2 230 60.9
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 2.1e-62 244.6 229 61.6
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 1.8e-61 241.5 363 43.3
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 8.1e-54 216.1 143 81.1
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 5.8e-52 209.9 410 37.8
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-49 202.2 234 52.6
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.5e-47 195.3 270 44.4
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 5.8e-44 183.3 288 43.4
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 3.9e-40 170.6 219 50.2
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.1e-40 170.2 125 72.8
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 9.6e-39 166.0 215 50.7
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.2e-33 149.1 189 42.9
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 3.9e-32 144.1 113 67.3
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.6e-31 140.2 268 36.2
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 3.4e-28 131.0 134 56.0
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 9.0e-21 106.3 374 26.5
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 7.9e-09 66.6 81 46.9
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 2.0e-07 62.0 99 39.4
PRCOL_00003186 Prasinoderma coloniale HOM05D000032 ORTHO05D006970 9.7e-07 59.7 60 48.3
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 2.2e-06 58.5 55 47.3
TAR629G2997 Trochodendron aralioides HOM05D000874 ORTHO05D001267 2.2e-06 58.5 45 53.3
Pp3c4_15980 Physcomitrium patens HOM05D000874 ORTHO05D001267 4.8e-06 57.4 92 37.0


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