Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 1.8e-63 245.7 125 100.0
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 2.0e-62 242.3 125 97.6
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 7.7e-62 240.4 124 96.8
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 1.2e-59 233.0 125 92.8
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 2.4e-55 218.8 125 88.0
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 5.3e-55 217.6 125 86.4
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 5.3e-55 217.6 125 84.0
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 1.7e-53 212.6 125 84.0
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 2.2e-53 212.2 124 82.3
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 3.8e-53 211.5 123 83.7
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 8.5e-53 210.3 125 80.0
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 8.5e-53 210.3 125 81.6
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 1.1e-52 209.9 125 81.6
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 2.5e-52 208.8 119 84.9
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 2.5e-52 208.8 119 84.9
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.5e-52 208.8 123 82.1
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.5e-52 208.8 123 82.1
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 4.2e-52 208.0 123 82.9
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 7.2e-52 207.2 125 80.8
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 7.2e-52 207.2 123 81.3
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 7.2e-52 207.2 120 83.3
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 1.6e-51 206.1 123 82.1
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 2.1e-51 205.7 125 80.0
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 2.1e-51 205.7 125 80.8
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 2.1e-51 205.7 125 80.8
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 3.6e-51 204.9 123 81.3
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 6.1e-51 204.1 125 80.0
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 8.0e-51 203.8 123 79.7
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 1.0e-50 203.4 123 78.0
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 1.0e-50 203.4 123 79.7
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 1.0e-50 203.4 120 80.0
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.4e-50 203.0 125 80.0
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.4e-50 203.0 125 80.0
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 1.8e-50 202.6 123 79.7
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 77.6
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 2.3e-50 202.2 122 78.7
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 2.3e-50 202.2 125 76.0
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 3.0e-50 201.8 125 76.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 4.0e-50 201.4 125 76.0
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 5.2e-50 201.1 123 77.2
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 5.2e-50 201.1 123 79.7
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 6.7e-50 200.7 125 78.4
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 1.2e-49 199.9 125 76.0
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.2e-49 199.9 125 76.0
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 1.5e-49 199.5 125 75.2
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 2.0e-49 199.1 125 77.6
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 2.0e-49 199.1 125 76.0
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 2.6e-49 198.7 123 78.0
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 3.3e-49 198.4 125 77.6
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 3.3e-49 198.4 123 75.6
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 3.3e-49 198.4 120 79.2
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.3e-49 198.4 123 78.0
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 4.4e-49 198.0 120 77.5
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 5.7e-49 197.6 120 77.5
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 5.7e-49 197.6 123 75.6
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 5.7e-49 197.6 123 77.2
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 5.7e-49 197.6 123 77.2
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 7.5e-49 197.2 123 75.6
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 7.5e-49 197.2 120 77.5
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 7.5e-49 197.2 120 77.5
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 7.5e-49 197.2 120 77.5
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 7.5e-49 197.2 120 77.5
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 7.5e-49 197.2 120 77.5
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 7.5e-49 197.2 123 77.2
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 1.3e-48 196.4 119 78.2
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 1.3e-48 196.4 123 76.4
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 1.7e-48 196.1 120 76.7
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 1.7e-48 196.1 123 78.0
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 1.7e-48 196.1 123 77.2
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 2.2e-48 195.7 123 77.2
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 2.8e-48 195.3 120 75.8
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 2.8e-48 195.3 125 76.0
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 3.7e-48 194.9 125 76.8
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 3.7e-48 194.9 125 76.8
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 3.7e-48 194.9 120 78.3
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 4.8e-48 194.5 154 66.2
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 6.3e-48 194.1 123 75.6
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 8.2e-48 193.7 123 74.8
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 8.2e-48 193.7 120 77.5
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.1e-47 193.4 119 78.2
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 1.4e-47 193.0 123 75.6
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 2.4e-47 192.2 122 76.2
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.1e-47 191.8 120 76.7
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 3.1e-47 191.8 120 75.8
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 4.1e-47 191.4 121 76.0
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 4.1e-47 191.4 120 77.5
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 7.0e-47 190.7 123 75.6
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 1.2e-46 189.9 125 76.8
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 2.7e-46 188.7 120 73.3
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.5e-46 188.0 120 75.0
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 4.5e-46 188.0 120 75.0
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 1.3e-45 186.4 129 72.1
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 1.7e-45 186.0 110 80.9
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.7e-45 186.0 125 73.6
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 2.2e-45 185.7 125 73.6
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 2.9e-45 185.3 125 72.8
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.8e-45 184.9 109 80.7
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 6.5e-45 184.1 125 72.0
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 3.2e-44 181.8 125 73.6
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 3.2e-44 181.8 123 70.7
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 4.2e-44 181.4 120 75.8
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 4.2e-44 181.4 123 74.0
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 5.5e-44 181.0 125 73.6
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 5.5e-44 181.0 123 74.0
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 4.7e-43 177.9 120 70.8
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 3.0e-42 175.3 120 69.2
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 8.8e-42 173.7 119 73.1
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 1.2e-41 173.3 123 70.7
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 5.7e-41 171.0 123 72.4
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 5.7e-41 171.0 123 72.4
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 7.5e-41 170.6 105 80.0
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 2.2e-40 169.1 120 66.7
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 4.8e-40 167.9 125 64.8
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.4e-39 166.4 124 68.5
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 4.5e-38 161.4 124 64.5
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 5.9e-38 161.0 83 95.2
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 5.9e-38 161.0 120 65.0
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 1.0e-37 160.2 125 64.8
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 1.7e-37 159.5 124 66.1
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 2.3e-37 159.1 120 64.2
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 4.2e-36 154.8 107 72.0
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 4.2e-36 154.8 119 63.9
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 9.5e-36 153.7 125 60.8
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 2.8e-35 152.1 120 61.7
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 1.0e-34 150.2 110 66.4
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 2.3e-34 149.1 97 73.2
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 4.4e-33 144.8 119 65.5
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 2.4e-31 139.0 121 54.5
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 5.4e-31 137.9 123 61.0
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 2.5e-28 129.0 118 60.2
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 6.1e-27 124.4 83 74.7
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 1.5e-25 119.8 90 63.3
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 9.8e-25 117.1 123 55.3
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 2.9e-24 115.5 125 55.2
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 1.4e-23 113.2 82 69.5
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 2.0e-22 109.4 120 46.7
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 2.7e-22 109.0 62 83.9
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 2.7e-22 109.0 100 59.0
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.3e-21 105.9 93 59.1
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 3.9e-21 105.1 67 71.6
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 3.9e-21 105.1 85 69.4
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 2.8e-19 99.0 60 76.7
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 4.7e-19 98.2 88 59.1
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 4.1e-15 85.1 63 61.9
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 5.6e-12 74.7 103 46.6
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 2.3e-10 69.3 47 68.1
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 3.7e-08 62.0 107 35.5
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 4.9e-08 61.6 39 71.8
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 4.1e-07 58.5 109 35.8


User provided reference genes

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